BAC Information

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BAC

Clone NameB6Ng01-296F20
Chromosome17 (Build37)
Map Location 37,347,952 - 37,349,008
singlet/doubletsinglet
Overlap geneOlfr95
Upstream geneLOC435525, LOC677333, LOC100043134, LOC625881, Rpp21, Trim39, H2-M10.2, H2-M10.1, H2-M10.3, Gm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94
Downstream geneOlfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296F20.bB6Ng01-296F20.g
ACCGA091994GA091995
length1,0261,055
definitionB6Ng01-296F20.b B6Ng01-296F20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacattcttctacatgataatcaccagttgtgccagcaccatttg
ttgaaaatgctgtcttatttccactggatggtttttgctcccttgtcaaa
gatcaagtgaccataattgtgtgggttcatttctgggtcttcaattctat
tccattggtctacttgtctgtcgatataccagtaccatgcagtttttatc
acaattgctctgtagtaaagctttaggtcagggatggtgatcccaccaga
ggttcttttatccttgagaagagtttttgctatcctaggttttttgttat
tccagatgaatttgcagattgccctttctaattcgttgaagaattgagtt
ggaattttgatggggattgcattgaatctgtagattgcttttggcaagat
agccagttttactatattgattctgccaatccatgagcatgggagatctt
ctgagagcttctttaatttctttcttcagagacttgaagttcttatcata
cagatcttttactgccttagttagagtcatgccaaggtattttatattat
ttgtgactattgagaagggtgttgtttccctaatttctttctcagcctgt
ttatcctttgtgtagagaaaggtcattgacttgtttgagttaattttata
tccagctacttcaccgaagctgtttatcaggcttaggagttctctggtgg
aatttttagggtcacttatatatacactatcatattatctgcaaaaagtg
atattttgacttcttcctttccaatttgtattcccttgatctcctcttgt
tgtcgaattgctctggctaggacttcaagtacaatgttgaataggtaggg
agaaagttggcagctttgtctagtccctgattttagtgggattgcttcca
gcttctaccatttactttgatgttggctactggtttgcttaagatgcttt
gtcatgttaagtatgggcctcgaagttcctgatcttttgaagacttttat
ccatgaagaggtattggaatttggtc
gaattcagtgtgtacttctgagaatgaggatagtacaaaaagaccagaaa
caaatatccatccagggttcctaggatgacctgggtataacatgggcttg
tgcctggacatctcagttctaagccttgatagcctaagaaaaaaggagta
cccaggcagacacagtggtggctcttctccacccctctctcttgaccaaa
ggctgaagcaagatgggcaccaactcctctctggttactgagttcgtgct
ggtgggcttctcacgtctggtccacctgcagggcatcctcttctccctgt
tcttgaccgtctacctgctcactgtggcaggcaatctcctcatcgtggcg
ctagtctccacagatgcagcgttgcagtctcccatgtacttcttcctccg
catcctctcagccctggagatctgctacacgtcggtcacagtccccttgc
tgctgcaccatctgctcactggccggcgccacatctcgcgctctggctgc
gctctgcaaatgttctttttccttttctttggtgccaccgagtgctgcct
gctggctgccatggcctatgaccgctatgctgcgatctgcgagcccctgc
gctaccaggtgctgctcagccgcagggtttgtgtgcagctcgcgggcgcc
gcgtggtcttgcggggctctagtggggctgggccacacctccttcatctt
ctccttgcccttctgtggccccaacgctgtccctcacttcttctgtgaga
tccagccggtgctgcagttggtgtgtggagacacctcgctcaacgagctg
cagattatcctggctgccgcccttatcatcttgtgcccctttggcctcat
tcttagctcctacggacggatcctggtcaccattttccgcatcccatccg
ctgctggtcgccgcaaagccttctcacctgttcctcccacctggtagtgg
tgtctctcttctatggtactgccatctttatctatatccgccctaagcca
gctatgacccaccacggaccccttgctgttccctcttctatgctgtgatc
acccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37347952_37349008
seq2: B6Ng01-296F20.g_68_1122 (reverse)

seq1  GGGGTGATCACAGCATAGAAGAGGG-ACAGCAGGGGGTCCGTGGTTGGGT  49
      ||||||||||||||||||||||||| |||||| ||||||||||| |||||
seq2  GGGGTGATCACAGCATAGAAGAGGGAACAGCAAGGGGTCCGTGG-TGGGT  49

seq1  CATAGCTGGCCTTAGGGCGGATATAGATAAAGATGGCAGTACCATAGAAG  99
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTGG-CTTAGGGCGGATATAGATAAAGATGGCAGTACCATAGAAG  98

seq1  AGAGACACCACTACCAGGTGGGAGGAACAGGTGGAGAAGGCTTTGCGGCG  149
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGAGACACCACTACCAGGTGGGAGGAACAGGT-GAGAAGGCTTTGCGGCG  147

seq1  ACCAGCAGCGGATGGGATGCGGAAAATGGTGACCAGGATCCGTCCGTAGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAGCGGATGGGATGCGGAAAATGGTGACCAGGATCCGTCCGTAGG  197

seq1  AGCTAAGAATGAGGCCAAAGGGGCACAAGATGATAAGGGCGGCAGCCAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGAATGAGGCCAAAGGGGCACAAGATGATAAGGGCGGCAGCCAGG  247

seq1  ATAATCTGCAGCTCGTTGAGCGAGGTGTCTCCACACACCAACTGCAGCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTGCAGCTCGTTGAGCGAGGTGTCTCCACACACCAACTGCAGCAC  297

seq1  CGGCTGGATCTCACAGAAGAAGTGAGGGACAGCGTTGGGGCCACAGAAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGGATCTCACAGAAGAAGTGAGGGACAGCGTTGGGGCCACAGAAGG  347

seq1  GCAAGGAGAAGATGAAGGAGGTGTGGCCCAGCCCCACTAGAGCCCCGCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGAGAAGATGAAGGAGGTGTGGCCCAGCCCCACTAGAGCCCCGCAA  397

seq1  GACCACGCGGCGCCCGCGAGCTGCACACAAACCCTGCGGCTGAGCAGCAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACGCGGCGCCCGCGAGCTGCACACAAACCCTGCGGCTGAGCAGCAC  447

seq1  CTGGTAGCGCAGGGGCTCGCAGATCGCAGCATAGCGGTCATAGGCCATGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAGCGCAGGGGCTCGCAGATCGCAGCATAGCGGTCATAGGCCATGG  497

seq1  CAGCCAGCAGGCAGCACTCGGTGGCACCAAAGAAAAGGAAAAAGAACATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGCAGGCAGCACTCGGTGGCACCAAAGAAAAGGAAAAAGAACATT  547

seq1  TGCAGAGCGCAGCCAGAGCGCGAGATGTGGCGCCGGCCAGTGAGCAGATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGCGCAGCCAGAGCGCGAGATGTGGCGCCGGCCAGTGAGCAGATG  597

seq1  GTGCAGCAGCAAGGGGACTGTGACCGACGTGTAGCAGATCTCCAGGGCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGCAGCAAGGGGACTGTGACCGACGTGTAGCAGATCTCCAGGGCTG  647

seq1  AGAGGATGCGGAGGAAGAAGTACATGGGAGACTGCAACGCTGCATCTGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATGCGGAGGAAGAAGTACATGGGAGACTGCAACGCTGCATCTGTG  697

seq1  GAGACTAGCGCCACGATGAGGAGATTGCCTGCCACAGTGAGCAGGTAGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTAGCGCCACGATGAGGAGATTGCCTGCCACAGTGAGCAGGTAGAC  747

seq1  GGTCAAGAACAGGGAGAAGAGGATGCCCTGCAGGTGGACCAGACGTGAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGAACAGGGAGAAGAGGATGCCCTGCAGGTGGACCAGACGTGAGA  797

seq1  AGCCCACCAGCACGAACTCAGTAACCAGAGAGGAGTTGGTGCCCATCTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACCAGCACGAACTCAGTAACCAGAGAGGAGTTGGTGCCCATCTTG  847

seq1  CTTCAGCCTTTGGTCAAGAGAGAGGGGTGGAGAAGAGCCACCACTGTGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCCTTTGGTCAAGAGAGAGGGGTGGAGAAGAGCCACCACTGTGTC  897

seq1  TGCCTGGGTACTCCTTTTTTCTTAGGCTATCAAGGCTTAGAACTGAGATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGGTACTCCTTTTTTCTTAGGCTATCAAGGCTTAGAACTGAGATG  947

seq1  TCCAGGCACAAGCCCATGTTATACCCAGGTCATCCTAGGAACCCTGGATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCACAAGCCCATGTTATACCCAGGTCATCCTAGGAACCCTGGATG  997

seq1  GATATTTGTTTCTGGTCTTTTTGTACTATCCTCATTCTCAGAAGTACACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTGTTTCTGGTCTTTTTGTACTATCCTCATTCTCAGAAGTACACA  1047

seq1  CTGAATTC  1057
      ||||||||
seq2  CTGAATTC  1055