BAC Information

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BAC

Clone NameB6Ng01-300G07
Chromosome17 (Build37)
Map Location 75,664,219 - 75,665,358
singlet/doubletsinglet
Overlap geneLtbp1
Upstream geneMemo1, 2810410M20Rik, LOC668773, LOC668775, Spast, Slc30a6, Nlrc4, LOC100043883, LOC624159, Yipf4, Birc6, Ttc27, LOC100043672, EG621988
Downstream geneRasgrp3, 2810405J04Rik, LOC668787, LOC100043885
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300G07.bB6Ng01-300G07.g
ACCGA094983GA094984
length1,1291,171
definitionB6Ng01-300G07.b B6Ng01-300G07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagtcatatcagttgttcatttttaaagtgaacagtgctctca
tcttcctgattacccagtgttacccacatggcttgtcacgagcctcctat
ttgcactgctccttcagtgttcttctctgctcatcaagccatgtgctggc
caggtcgggtgaactaccttggagtttgctgttcatgacactgctttcct
actcaaaacctttctatgtatctctctgttttcagtaagattgaagccaa
acctagcctggcatgtagcagctctgtctcccaactatgtacctcattgt
acatttttccatttagttgcgtgccttaccattttcctggtcccttccct
tggccaatctctgtgctcatgcttcagtctccacccatgtgaatatgtct
tctaacccagtcccatcactgtcccccccaccgacccactgccacacaca
cacctccctcctaccctgaggaagtctcacatcctcccaacactgcctct
gacttctttcagtagtgcttgcctgtctctgtaagcaatttcagatacga
attccagtttctaattgttctagtttaggtaacttgtactattctttaca
gctttcacagttcatacttttatgcacatctaggatgtcaatacctccag
actgaggctgcctccctgtatactgggtaatgcttagcataagctaaggc
aaaagctttgcgaagatggctctatagatcaatattgtacactagtatat
tttcagcacctaagacagaacccggagtataacatatatatcagaactaa
tgatacaactgcagatgcttcatagagactcagtgtaaaaataactttta
ttcaccaggtgtaattgttgtcatagaggctgactgctgagtaatctcac
cctttctagttctttctgactctggctggctggtcaactcagctattttg
gctcataagtcctctcatgctgtctgatccaaaccggtttctctcgcttc
tgaccaaattactctgcttggctcaactaactctggcatctgtctaatct
tctggctccctccttctctgctcattctgtcttcacctgtcgctcttaca
actgtctttgtaactgctagaaccttgcc
gaattcaaggcctgtacctaaacacaataaaagcaatttacagcaaacca
acagccaatatctaattaaatgggatatacatgaagcaatcccactaaaa
tcaggaagaaaagaatgcccactctctcaatagctattcaaaatagtaac
ttgaagttctagctagagcaataagacaacaaaaggagataaaggggata
caaattggcaaagaagaagtcagggtatcactatttggagatgatatgat
agtatatatatataagtaaccacaaaaattctaccagagaacttctacaa
ctgataaacaacttcggcaaagtggctggatataaaattaacttaaataa
accagtagcctccctttatataaataggctgagaaagaaattaatgaaat
gacatccttcacaatagccacaaaaatataaaatatcttggggtaactct
aaccaaacaataacttcaagtctctcaagaaagaagtcaaagaagatctc
agaaaatggagaggtcttccatgctcatggattggcagaattaacatagt
aaaaatggcatcgtacaagagcaatctacagattcaatgtaacctcatca
aaatcccaacataattctttaaagacatggaaaaagccattatcaaattc
atctggagaaccaaaaagcctagaatagcaaaaaaaaaaaaaaaaaaaaa
aaaaattattcttaacaatagaagaacttctgagggaatcaccatcctta
acctcaaactgtggtacagagcaatagtgataaaaattgcatggtattgt
tacagagacagacaggttgtccagtggaatagaattgaagactcagaaat
ataaccacacacttatggactcttgatctttgatgaagaagccaaaaata
tacaatagaaaaaagaaagtatcttcaataaatggtgttgcctaaaagca
gcctgtatgtagaaaaatgaaaaatattgtcactacacaaagctcaagtc
agtgtatccagactcaccataaaacagaatacactgatctaaaggaagaa
agcggcaagagtctgactcataagtaagggacttcctaaacggtactcat
gcaagttcaactcagattagtatgatccatgaatgaagctcgtagcgaga
caatgtcatagacaaatgcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_75664219_75665358
seq2: B6Ng01-300G07.b_45_1173

seq1  GAATTCCAAGTCATATCAGTTGTTCATTTTTAAAGTGAACAGTGCTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTCATATCAGTTGTTCATTTTTAAAGTGAACAGTGCTCTCA  50

seq1  TCTTCCTGATTACCCAGTGTTACCCACATGGCTTGTCACGAGCCTCCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGATTACCCAGTGTTACCCACATGGCTTGTCACGAGCCTCCTAT  100

seq1  TTGCACTGCTCCTTCAGTGTTCTTCTCTGCTCATCAAGCCATGTGCTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTGCTCCTTCAGTGTTCTTCTCTGCTCATCAAGCCATGTGCTGGC  150

seq1  CAGGTCGGGTGAACTACCTTGGAGTTTGCTGTTCATGACACTGCTTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCGGGTGAACTACCTTGGAGTTTGCTGTTCATGACACTGCTTTCCT  200

seq1  ACTCAAAACCTTTCTATGTATCTCTCTGTTTTCAGTAAGATTGAAGCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAACCTTTCTATGTATCTCTCTGTTTTCAGTAAGATTGAAGCCAA  250

seq1  ACCTAGCCTGGCATGTAGCAGCTCTGTCTCCCAACTATGTACCTCATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGCCTGGCATGTAGCAGCTCTGTCTCCCAACTATGTACCTCATTGT  300

seq1  ACATTTTTCCATTTAGTTGCGTGCCTTACCATTTTCCTGGTCCCTTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTCCATTTAGTTGCGTGCCTTACCATTTTCCTGGTCCCTTCCCT  350

seq1  TGGCCAATCTCTGTGCTCATGCTTCAGTCTCCACCCATGTGAATATGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAATCTCTGTGCTCATGCTTCAGTCTCCACCCATGTGAATATGTCT  400

seq1  TCTAACCCAGTCCCATCACTGTCCCCCCCACCGACCCACTGCCACACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCCAGTCCCATCACTGTCCCCCCCACCGACCCACTGCCACACACA  450

seq1  CACCTCCCTCCTACCCTGAGGAAGTCTCACATCCTCCCAACACTGCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCCTCCTACCCTGAGGAAGTCTCACATCCTCCCAACACTGCCTCT  500

seq1  GACTTCTTTCAGTAGTGCTTGCCTGTCTCTGTAAGCAATTTCAGATACGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTTTCAGTAGTGCTTGCCTGTCTCTGTAAGCAATTTCAGATACGA  550

seq1  ATTCCAGTTTCTAATTGTTCTAGTTTAGGTAACTTGTACTATTCTTTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGTTTCTAATTGTTCTAGTTTAGGTAACTTGTACTATTCTTTACA  600

seq1  GCTTTCACAGTTCATACTTTTATGCACATCTAGGATGTCAATACCTCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCACAGTTCATACTTTTATGCACATCTAGGATGTCAATACCTCCAG  650

seq1  ACTGAGGCTGCCTCCCTGTATACTGGGTAATGCTTAGCATAAGCTAAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGCTGCCTCCCTGTATACTGGGTAATGCTTAGCATAAGCTAAGGC  700

seq1  AAAAGCTTTGCGAAGATGGCTCTATAGATCAATATTGTACACTAGTATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTTGCGAAGATGGCTCTATAGATCAATATTGTACACTAGTATAT  750

seq1  TTTCAGCACCTAAGACAGAACCCGGAGTATAACATATATATCAGAACTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCACCTAAGACAGAACCCGGAGTATAACATATATATCAGAACTAA  800

seq1  TGATACAACTGCAGATGCTTCATAGAGACTCAGTGTAAAAATAACTTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAACTGCAGATGCTTCATAGAGACTCAGTGTAAAAATAACTTTTA  850

seq1  TTCACCAGGTGTAATTGTTGTCATAGAGGCTGACTGCTGAGTAATCTCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCAGGTGTAATTGTTGTCATAGAGGCTGACTGCTGAGTAATCTCAC  900

seq1  CCTTTCTAGTTCTTTCTGAACTCTGGCTGGCTGGTCAACTCAGCTATTTT  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCTTTCTAGTTCTTTCTG-ACTCTGGCTGGCTGGTCAACTCAGCTATTTT  949

seq1  GGCTCATAAGTCCTCTCCATGCTGTCTGATCCAAACCGGTTTCTCTCGGC  1000
      |||||||||||||||| |||||||||||||||||||||||||||||| ||
seq2  GGCTCATAAGTCCTCT-CATGCTGTCTGATCCAAACCGGTTTCTCTC-GC  997

seq1  TTCTGACCAAATTACTCTGCTTGGCCTCAAACTAACTCTGGCAATCTGTT  1050
      |||||||||||||||||||||||| ||| ||||||||||||| ||||| |
seq2  TTCTGACCAAATTACTCTGCTTGG-CTC-AACTAACTCTGGC-ATCTG-T  1043

seq1  CTAATCTTCTGGCT-CCTCCTTCTCTGGCTCATTCTGTCTTCACCTGTTC  1099
      |||||||||||||| ||||||||||| |||||||||||||||||||| ||
seq2  CTAATCTTCTGGCTCCCTCCTTCTCT-GCTCATTCTGTCTTCACCTG-TC  1091

seq1  GCTC-TACAACCTGTCTTTGTAAAACTGCTAGACACCTTGCC  1140
      |||| ||||| ||||||||||  |||||||||| ||||||||
seq2  GCTCTTACAA-CTGTCTTTGT--AACTGCTAGA-ACCTTGCC  1129