BAC Information

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BAC

Clone NameB6Ng01-303B02
Chromosome17 (Build37)
Map Location 61,167,597 - 61,168,728
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043549
Downstream geneLOC433129, EG620725, LOC100043560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303B02.bB6Ng01-303B02.g
ACCGA096958GA096959
length1,1371,159
definitionB6Ng01-303B02.b B6Ng01-303B02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctaggttctgagaattttattcaaagaactgacataatggc
ttgcacagaatggcaaaagtagcaaagtgaatttatgtaaagtgatgcaa
cttagaggggcatactgtcaagactgacactgcaatctgaggaccttatg
ttccctccttcattgactcagtgtctttgaattgcagggatggctttcta
ccttgattgacagattaggttatatgttcatttgtctcactgtgttgtcc
tttccaagattgactctgattttagccacatggatatcaaattatgctca
gtgataagatgatgaaagggatggggttctcccaaaaggttatttggaag
gcttagtctgggttattgggtatgcctgccccaaaccagctcaggaaaac
taagtctttgtattcttcagagtgctattctttgagaatttatgtgaaca
gaaactgttcatagttaaaagttgttagaggtggaggaagatttgctgtt
gttatgagatgtggattctgatgtagaggagtaacacagagagttgcatt
gaggttgcattggttgtagaggggtgcacgtagacacagtgtgtgcagac
aaagacttaggcttctaaggaaagagagaagtatctagaactcaaaccaa
gtaaaggcccaggtaactaaattattccctatgcttgcctgtctcaggac
ttactatcctaccttttctgagatctgtctgcctctgcctcctgagttag
ccactatatgcctgactaccatttgctcctgaaagagaacggattttttt
tcggagatattaaacacgctttagatagtagaggctttagatgtcttgtt
tcatatctcttccagtgttattgaaatatttaacgtattttctttcaata
ataaaataatatttcatagttataaaagtatgtttttactaatattaagt
ggaggaaagattgtacatccatatctagacagaggcctgaggacatattt
accctacaacgcaaagacctagtagtttaattgtttttcataggggagcc
attcactgatattctgtttaagtttatgtaaattgtcttaagagacccaa
agactgaaatggacttacctgctgcattcatcattgc
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagccgtctcttgtgagactatgcccggggcccagcaaa
cacagaagtggatgctcacagtcagctaatggatgggatcatagggctcc
caatggaggagctagagaaagtagccaaggagctaaggatctgcaaccta
taggtggaacaacattatgagctacagtaccccggagcttctgacttcta
gctgcatatatatcaaaagatggccctagttcgtcatcactgaaagaaga
gcccatggactgcaaacttaatggccagttaccaggaaaatacccaaggt
caaaaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_61167597_61168728
seq2: B6Ng01-303B02.b_45_1181

seq1  GAATTCTTTCTAGGTTCTGAGAATTTTATTCAAAGAACTGACATAATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTAGGTTCTGAGAATTTTATTCAAAGAACTGACATAATGGC  50

seq1  TTGCACAGAATGGCAAAAGTAGCAAAGTGAATTTATGTAAAGTGATGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACAGAATGGCAAAAGTAGCAAAGTGAATTTATGTAAAGTGATGCAA  100

seq1  CTTAGAGGGGCATACTGTCAAGACTGACACTGCAATCTGAGGACCTTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGGGGCATACTGTCAAGACTGACACTGCAATCTGAGGACCTTATG  150

seq1  TTCCCTCCTTCATTGACTCAGTGTCTTTGAATTGCAGGGATGGCTTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCCTTCATTGACTCAGTGTCTTTGAATTGCAGGGATGGCTTTCTA  200

seq1  CCTTGATTGACAGATTAGGTTATATGTTCATTTGTCTCACTGTGTTGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATTGACAGATTAGGTTATATGTTCATTTGTCTCACTGTGTTGTCC  250

seq1  TTTCCAAGATTGACTCTGATTTTAGCCACATGGATATCAAATTATGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAGATTGACTCTGATTTTAGCCACATGGATATCAAATTATGCTCA  300

seq1  GTGATAAGATGATGAAAGGGATGGGGTTCTCCCAAAAGGTTATTTGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAAGATGATGAAAGGGATGGGGTTCTCCCAAAAGGTTATTTGGAAG  350

seq1  GCTTAGTCTGGGTTATTGGGTATGCCTGCCCCAAACCAGCTCAGGAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGTCTGGGTTATTGGGTATGCCTGCCCCAAACCAGCTCAGGAAAAC  400

seq1  TAAGTCTTTGTATTCTTCAGAGTGCTATTCTTTGAGAATTTATGTGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTTTGTATTCTTCAGAGTGCTATTCTTTGAGAATTTATGTGAACA  450

seq1  GAAACTGTTCATAGTTAAAAGTTGTTAGAGGTGGAGGAAGATTTGCTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGTTCATAGTTAAAAGTTGTTAGAGGTGGAGGAAGATTTGCTGTT  500

seq1  GTTATGAGATGTGGATTCTGATGTAGAGGAGTAACACAGAGAGTTGCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGAGATGTGGATTCTGATGTAGAGGAGTAACACAGAGAGTTGCATT  550

seq1  GAGGTTGCATTGGTTGTAGAGGGGTGCACGTAGACACAGTGTGTGCAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGCATTGGTTGTAGAGGGGTGCACGTAGACACAGTGTGTGCAGAC  600

seq1  AAAGACTTAGGCTTCTAAGGAAAGAGAGAAGTATCTAGAACTCAAACCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTTAGGCTTCTAAGGAAAGAGAGAAGTATCTAGAACTCAAACCAA  650

seq1  GTAAAGGCCCAGGTAACTAAATTATTCCCTATGCTTGCCTGTCTCAGGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGGCCCAGGTAACTAAATTATTCCCTATGCTTGCCTGTCTCAGGAC  700

seq1  TTACTATCCTACCTTTTCTGAGATCTGTCTGCCTCTGCCTCCTGAGTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATCCTACCTTTTCTGAGATCTGTCTGCCTCTGCCTCCTGAGTTAG  750

seq1  CCACTATATGCCTGACTACCATTTGCTCCTGAAAGAGAACGGATTTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATATGCCTGACTACCATTTGCTCCTGAAAGAGAACGGATTTTTTT  800

seq1  TCGGAGATATTAAACACGCTTTAGATAGTAGAGGCTTTAGATGTCTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGATATTAAACACGCTTTAGATAGTAGAGGCTTTAGATGTCTTGTT  850

seq1  TCATATCTCTTCCAGTGTTATTGAAATATTTAACGTATTTTCTTTCAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCTCTTCCAGTGTTATTGAAATATTTAACGTATTTTCTTTCAATA  900

seq1  ATAAAATAATATTTCATAGTTATAAAAGTATG-TTTTACTAATATTTAAG  949
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  ATAAAATAATATTTCATAGTTATAAAAGTATGTTTTTACTAATA-TTAAG  949

seq1  TGGAGGAAAGA-TGTACATCCATATCTAGACAGAGGCCTGAGGACATATT  998
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAAGATTGTACATCCATATCTAGACAGAGGCCTGAGGACATATT  999

seq1  TA-CCTACAACGCAAAGACCTAG-AGTTTAAT--GTTTTCATA-GGGAGC  1043
      || |||||||||||||||||||| ||||||||   |||||||| ||||||
seq2  TACCCTACAACGCAAAGACCTAGTAGTTTAATTGTTTTTCATAGGGGAGC  1049

seq1  CATTCACTGATATTCTGTTTTAGGTTTAGGAAAATTGTCTTAGGAGA-CC  1092
      ||||||||||||||||| |||| ||||| | ||||||||||| |||| ||
seq2  CATTCACTGATATTCTG-TTTAAGTTTATGTAAATTGTCTTAAGAGACCC  1098

seq1  AAAGACTGAAAGGGACTTAACTGGTGCATTTCATCATTGC  1132
      ||||||||||| ||||||| ||| |||| |||||||||||
seq2  AAAGACTGAAATGGACTTACCTGCTGCA-TTCATCATTGC  1137