BAC Information

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BAC

Clone NameB6Ng01-303H03
Chromosome17 (Build37)
Map Location 37,909,445 - 37,910,553
singlet/doubletsinglet
Overlap geneOlfr122
Upstream geneH2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121
Downstream geneOlfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303H03.bB6Ng01-303H03.g
ACCGA097244GA097245
length1,1951,109
definitionB6Ng01-303H03.b B6Ng01-303H03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacacccactctggaaatcagtctggcgattcctca
gaaaattggacatagtactaccggaggatcccacaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgatccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggaggttatcatcctgagtgaagtaacccaatcacaaag
gaacttgcacaatatgtactcactgataagtggataatagcccagaaact
ttggatacccaagatataagatataatttgccaaacgcatgaaattcaag
aacgaagaccaaagtgtggacactttaccctttcttagaaatgggaacaa
aacacccatagaaggagttacagagacaaaatttggagctgtgacgaaag
gatggaccatctagtgactgccatatgcagggatccatcccataatcagc
ttccaaatgctgacaccattgcatacactagcaagatttcactgaaagga
cccagttatagctctctcttgtgagactatgcccggggcctagcaaacac
agaagtggatgatcacagtcagctattggatgggtcacatggcccctaat
ggaggagctagagaaattacccaaggagctatagggaactgcaaccctat
aggtggaacacatatgaactaccagtacccgggagctcttgtctttagct
gcatatgttatttaaaagatggcctagtcggcatcactgcaaagagaagc
cccattgactgcaacttatgttgcccagtacagggacgccaagtctaaaa
ggcgcactgggatggctagggaaaaattggggctctctagcttgc
gaattcttttactctaccctgctagaaatcatataggggaagagaaacta
ttcctgtgccaataattctaggactagtgtgtccaaagcctggagtgtgg
actgacctaatggtacacagaacagaggctaacaattatctgccctgaga
actacttagctgttccagtccaatacaaagggtttacatgtcttgaggaa
tatggaattttagtataacaagctgagatcacttagaagtagtttgaaga
tttacaaatgtacaaatgttcatctgcacatacataaatttgtaaatttt
agaaaatcttgcaaatatacccataaatttttgtttaccgttgtttcttc
tcctataatatcactattttttaattatttacatcttagaaaattctgac
aattatttctcatatttttttctttaatggtttgttaaatggtagattaa
aaagttgacagtttgcaaaattggaatgtttacatgttctgtaaacagga
tccataaaagaattattaagttctacattacatgtgtgtataatttcatc
tgaagaatttaaagacttttatgagaggaaataccctgcttcataaagct
attaaggcagtaagtaccacttatatttaatacttaatgttttgctaacc
ggtgtagagtgcagaggtaacaggtatatcaggggccggacaatggctga
gaatgcatacagagaatttttaaggctcctgagatattagcaagtgattt
aaattcttcccagatgaaaatatttaagtactggactaacctactaaagt
tatttagtagcaatcatacatttccattatttgtaattaaaaaaaaaatc
atgctgaataaagagaatactctaagacaaagttacgtttattaaaggtt
cctttaaaggcagccaggaagagcacagcaattttgtttgcttacttgga
cagactgtgcaccctttcagagcacttcagatcctcagttacctattcat
atcagaacttttctcagactcagtgttttctcagtgctgcctcactccct
tgttcttagctataagatgatgggggttcagcatggaatgtcaccgctgt
gttaagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37909445_37910553
seq2: B6Ng01-303H03.g_68_1176 (reverse)

seq1  TTTCT--ACACAGCGGTGACA-TCCATGCTGAA-CCCCATCATC-TATAG  45
      |||||  |||||||||||||| ||||||||||| |||||||||| |||||
seq2  TTTCTTAACACAGCGGTGACATTCCATGCTGAACCCCCATCATCTTATAG  50

seq1  CTTAAGGAACAAGGAAGTGAAGGCAGCACTGAGAAAAACACTGAGTCTGA  95
      ||  | |||||||| |||| ||||||||||||| ||||||||||||||||
seq2  CT--AAGAACAAGGGAGTG-AGGCAGCACTGAG-AAAACACTGAGTCTGA  96

seq1  AGAAAGTTCTGATAATGAATAGGTAACTGAGGATCCTGAAGTGCTCCTGA  145
        ||||||||||| |||||||||||||||||||| |||||||||| ||||
seq2  GAAAAGTTCTGAT-ATGAATAGGTAACTGAGGAT-CTGAAGTGCT-CTGA  143

seq1  AAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCC  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCC  193

seq1  TGGCTGCC-TTAAAGGAACCTTTAATAAACGTAACTTTGTCTTAGAGTAT  244
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCCTTTAAAGGAACCTTTAATAAACGTAACTTTGTCTTAGAGTAT  243

seq1  TCTCTTTATTCAGCATGA-TTTTTTTTTAATTACAAATAATGGAAATGTA  293
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTCTTTATTCAGCATGATTTTTTTTTTAATTACAAATAATGGAAATGTA  293

seq1  TGATTGCTACTAAATAACTTTAGTAGGTTAGTCCAGTACTTAAATATTTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCTACTAAATAACTTTAGTAGGTTAGTCCAGTACTTAAATATTTT  343

seq1  CATCTGGGAAGAATTTAAATCACTTGCTAATATCTCAGGAGCCTTAAAAA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGGAAGAATTTAAATCACTTGCTAATATCTCAGGAGCCTTAAAAA  393

seq1  TTCTCTGTATGCATTCTCAGCCATTGTCCGGCCCCTGATATACCTGTTAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTATGCATTCTCAGCCATTGTCCGGCCCCTGATATACCTGTTAC  443

seq1  CTCTGCACTCTACACCGGTTAGCAAAACATTAAGTATTAAATATAAGTGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCACTCTACACCGGTTAGCAAAACATTAAGTATTAAATATAAGTGG  493

seq1  TACTTACTGCCTTAATAGCTTTATGAAGCAGGGTATTTCCTCTCATAAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACTGCCTTAATAGCTTTATGAAGCAGGGTATTTCCTCTCATAAAA  543

seq1  GTCTTTAAATTCTTCAGATGAAATTATACACACATGTAATGTAGAACTTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTAAATTCTTCAGATGAAATTATACACACATGTAATGTAGAACTTA  593

seq1  ATAATTCTTTTATGGATCCTGTTTACAGAACATGTAAACATTCCAATTTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCTTTTATGGATCCTGTTTACAGAACATGTAAACATTCCAATTTT  643

seq1  GCAAACTGTCAACTTTTTAATCTACCATTTAACAAACCATTAAAGAAAAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTGTCAACTTTTTAATCTACCATTTAACAAACCATTAAAGAAAAA  693

seq1  AATATGAGAAATAATTGTCAGAATTTTCTAAGATGTAAATAATTAAAAAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAGAAATAATTGTCAGAATTTTCTAAGATGTAAATAATTAAAAAA  743

seq1  TAGTGATATTATAGGAGAAGAAACAACGGTAAACAAAAATTTATGGGTAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATATTATAGGAGAAGAAACAACGGTAAACAAAAATTTATGGGTAT  793

seq1  ATTTGCAAGATTTTCTAAAATTTACAAATTTATGTATGTGCAGATGAACA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAAGATTTTCTAAAATTTACAAATTTATGTATGTGCAGATGAACA  843

seq1  TTTGTACATTTGTAAATCTTCAAACTACTTCTAAGTGATCTCAGCTTGTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACATTTGTAAATCTTCAAACTACTTCTAAGTGATCTCAGCTTGTT  893

seq1  ATACTAAAATTCCATATTCCTCAAGACATGTAAACCCTTTGTATTGGACT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAAATTCCATATTCCTCAAGACATGTAAACCCTTTGTATTGGACT  943

seq1  GGAACAGCTAAGTAGTTCTCAGGGCAGATAATTGTTAGCCTCTGTTCTGT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGCTAAGTAGTTCTCAGGGCAGATAATTGTTAGCCTCTGTTCTGT  993

seq1  GTACCATTAGGTCAGTCCACACTCCAGGCTTTGGACACACTAGTCCTAGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATTAGGTCAGTCCACACTCCAGGCTTTGGACACACTAGTCCTAGA  1043

seq1  ATTATTGGCACAGGAATAGTTTCTCTTCCCCTATATGATTTCTAGCAGGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGGCACAGGAATAGTTTCTCTTCCCCTATATGATTTCTAGCAGGG  1093

seq1  TAGAGTAAAAGAATTC  1109
      ||||||||||||||||
seq2  TAGAGTAAAAGAATTC  1109