BAC Information

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BAC

Clone NameB6Ng01-305E13
Chromosome17 (Build37)
Map Location 13,746,401 - 13,747,322
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc22a2, Slc22a1, Igf2r, Air, EG635617, Mas1, Mrgprh, Pnldc1, Mrpl18, Tcp1, Acat3, Acat2, Wtap, Sod2, Gpr31c, Tcp10c, Ttll2, Unc93a, Smok2a, Smok2b, LOC667359, LOC100041352, LOC667372, LOC667384, Smok4a
Downstream geneTcte2, Mllt4, LOC100041464, EG635895, EG664821, EG664831, 4930488N24Rik, Dact2, Smoc2, LOC664856
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305E13.bB6Ng01-305E13.g
ACCGA098613GA098614
length9211,092
definitionB6Ng01-305E13.b B6Ng01-305E13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtggaaagagaaacctcaagagagaaaacacctttctcagatt
ggcctgtaggcaagtctgtggggcattttcttgattgatgattgatctga
gacagtctagctcattgtgggtgagactacccctgggcaggtgatcctgg
ttagtatatgacagcggctgagcaagccatggggagtaggccagtaagca
gcatccctccatggcctctgcatcagctcctgcctccaggttgcctaaat
agactgtgatccagcatatgtaagccaaataaaccctttcctgtcgaagt
tgcttttggtcatgtttcaccatagcaacagagagcaaaccagggcatgc
atgcatggaagtgggccgggaagtatatccactccctatccccatcgaca
cttgcttcttagctcaattcaaagctgcttgcttttcttttcagcttctt
ttatgaccaggttgccttgaatacatacaggcaggcaggtcctctcctta
ggcttcacagtcagggggcttcacaaactcagtggacagcagagaacctt
aaataaacctagaaaggaaaacaggacattaaagtgactttcttccccaa
aagattaaaaattaataaaacaaaaatcacactaccccgccccctgacag
aaacatgtatttcaaattggcttggtttctatttctccacattcttttac
attgctaggccctttgcttcttatcaccatgatttcaaagaaactttcaa
attgttttgttttactatagatgcaacgtgaacatgtgaccaagcctctt
ctgatagctcagagtttttaactcaaatcttctgtgcatttcccttaagg
aagttactgttcaaatgttcgatgcatttatttgttatttgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtg
gaattcttcagttctgttgccatctccttactccagtgttttggttcctg
tgcagtcccatagctgatgtcgtgatttctgtatctgtttatatcctcct
cagaaagtcatggcatatgccaaggtctctacccctttcctctgccttcc
tgcagggtttggtttgggtcttacatgaagttgcttggtccattttgagt
tgatgctgtataggatgaggactgagtctccatctgaatccaggttttcc
tccctgaacttgaagaagccatatctactccagcatccactttttgccat
ctttgccaagaatcagacagctgccgctctgtagatttatttcagggtct
tcttttctactccattggtctatacatctgtctttgtgtcagtaccatgc
tggtagttttactgtggttctgtcatagaatttaaagtcaggaattaagt
tgccttcaatagcgctgtgcgcacaggattgctttgtgtgtgcactggat
tgctttgagtgtgtacaggattgctttgtgtgtgtacaggattgctttat
gtgcaaaggattgctgtgtgtgcaaaggattgctgtgtgtgcacaggatt
gctttgtggactatttagcattgtttgtgttttcatatgaactttaagtt
tggatttttgttgttttgtttttctagtttcctgaagcatgtcatttgga
attctggtgaagactacattgaaattaaagatgactttttttgtaacgga
gccattttcatggttatttctgccaacctgtgagcatgagaggtctttgc
atattctagtatcttcattttctcttcttagtgtttccttgtagaggctt
tctggttcttgggcatgcttgctcctaggttttattttgataatattgta
aagggattgtttttcctgacatttctagtgattttcttcctgttgttctc
ttgtttagttttcaagacatggttttctctctgtgtatccttggctgctc
ttgtagaccagctggctctaactcacagagattcactgcctctgctctta
cttctgcctcttgaatgctggatatgaaggctgcacccttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_13746401_13747322
seq2: B6Ng01-305E13.b_45_965

seq1  GAATTCTGTGGAAAGAGAAACCTCAAGAGAGAAAACACCTTTCTCAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGAAAGAGAAACCTCAAGAGAGAAAACACCTTTCTCAGATT  50

seq1  GGCCTGTAGGCAAGTCTGTGGGGCATTTTCTTGATTGATGATTGATCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTAGGCAAGTCTGTGGGGCATTTTCTTGATTGATGATTGATCTGA  100

seq1  GACAGTCTAGCTCATTGTGGGTGAGACTACCCCTGGGCAGGTGATCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCTAGCTCATTGTGGGTGAGACTACCCCTGGGCAGGTGATCCTGG  150

seq1  TTAGTATATGACAGCGGCTGAGCAAGCCATGGGGAGTAGGCCAGTAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATATGACAGCGGCTGAGCAAGCCATGGGGAGTAGGCCAGTAAGCA  200

seq1  GCATCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAGGTTGCCTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCTCCATGGCCTCTGCATCAGCTCCTGCCTCCAGGTTGCCTAAAT  250

seq1  AGACTGTGATCCAGCATATGTAAGCCAAATAAACCCTTTCCTGTCGAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGATCCAGCATATGTAAGCCAAATAAACCCTTTCCTGTCGAAGT  300

seq1  TGCTTTTGGTCATGTTTCACCATAGCAACAGAGAGCAAACCAGGGCATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTGGTCATGTTTCACCATAGCAACAGAGAGCAAACCAGGGCATGC  350

seq1  ATGCATGGAAGTGGGCCGGGAAGTATATCCACTCCCTATCCCCATCGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGGAAGTGGGCCGGGAAGTATATCCACTCCCTATCCCCATCGACA  400

seq1  CTTGCTTCTTAGCTCAATTCAAAGCTGCTTGCTTTTCTTTTCAGCTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTCTTAGCTCAATTCAAAGCTGCTTGCTTTTCTTTTCAGCTTCTT  450

seq1  TTATGACCAGGTTGCCTTGAATACATACAGGCAGGCAGGTCCTCTCCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACCAGGTTGCCTTGAATACATACAGGCAGGCAGGTCCTCTCCTTA  500

seq1  GGCTTCACAGTCAGGGGGCTTCACAAACTCAGTGGACAGCAGAGAACCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCACAGTCAGGGGGCTTCACAAACTCAGTGGACAGCAGAGAACCTT  550

seq1  AAATAAACCTAGAAAGGAAAACAGGACATTAAAGTGACTTTCTTCCCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACCTAGAAAGGAAAACAGGACATTAAAGTGACTTTCTTCCCCAA  600

seq1  AAGATTAAAAATTAATAAAACAAAAATCACACTACCCCGCCCCCTGACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTAAAAATTAATAAAACAAAAATCACACTACCCCGCCCCCTGACAG  650

seq1  AAACATGTATTTCAAATTGGCTTGGTTTCTATTTCTCCACATTCTTTTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTATTTCAAATTGGCTTGGTTTCTATTTCTCCACATTCTTTTAC  700

seq1  ATTGCTAGGCCCTTTGCTTCTTATCACCATGATTTCAAAGAAACTTTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTAGGCCCTTTGCTTCTTATCACCATGATTTCAAAGAAACTTTCAA  750

seq1  ATTGTTTTGTTTTACTATAGATGCAACGTGAACATGTGACCAAGCCTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTGTTTTACTATAGATGCAACGTGAACATGTGACCAAGCCTCTT  800

seq1  CTGATAGCTCAGAGTTTTTAACTCAAATCTTCTGTGCATTTCCCTTAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAGCTCAGAGTTTTTAACTCAAATCTTCTGTGCATTTCCCTTAAGG  850

seq1  AAAGTTACTGTTCAAATGTTCGATGCATTTATTTGTTATTTGTGTGTGTG  900
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAGTTACTGTTCAAATGTTCGATGCATTTATTTGTTATTTGTGTGTGTG  899

seq1  TGTGTGTGTGTGTGTGTGTGTG  922
      ||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTG  921