BAC Information

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BAC

Clone NameB6Ng01-305P17
Chromosome17 (Build37)
Map Location 51,330,097 - 51,331,242
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668475, EG628747, LOC100043818, Dazl, Plcl2, EG654432, Tbc1d5
Downstream geneLOC100043451, LOC100043452, Satb1, EG628919
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305P17.bB6Ng01-305P17.g
ACCGA099134GA099135
length5791,143
definitionB6Ng01-305P17.b B6Ng01-305P17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
catcttacacctatcagaatggactgtgaagatgcaagacacagcacatg
ctattcagaatgtaaatgtgtacagccaactatggatatcagtatggtag
ttccttataaaaataggaatcagtctacctcaagatccagctataccact
cttgggcatatacccaaaggatactttatcttaccacaggaacacttaac
tcacatatattcttgttgatctattaaagtagccacaaattagaaatcta
gatgtccctcaacagaaaaaaaatggatgaagaaaatatggtgcatttac
acaatgtaacactattcagctctttttaaaagtgacatcatgaaattttc
cagcaaatgaatggaactaggaaaaaaaatcctgagtgaggtaactcaga
ttcagaaagatatatatggtacatattcactcatatctgaatattagcca
ttaaataaatgataaccaagctacactccatagacccaaagaggttaagc
atagagatagggactgtggggtgggtagggaacatggatctccttgggag
ggaatgatgggatagattttatggatgga

gaattcaagaccagcctagataacttagtgagacccccccccccatctaa
agtaaaatgtaaaaagtaaaatagggatatagctcagttgtagagtagct
gcttagaatgtgcaggaccctaggcttaatgtctaatttgtagtaacaca
cacacacacacacacacacacacacacacacagagagagagagagagaga
gagagagagagagagagagagagagatccatggagacagaatcagaatag
tagtagccaggaattgtagggaatggaaaatacagagttcttcctttaat
gagtacagttttaattttaaagaagagcgtgctattgagattgcacatgt
gtacactaaaaaacaatttaacatgccagcctttatgttagttgtgcttt
gccataaattttcagagaaaagtttcaaatatagataaataatacagaga
gaaaaacccaaaagtgctgtctaatacaggcaaggtggcatataccgcac
cacttgcaagcaggacctgagcaccgagcctctggggctttcctttgatt
actgcaagtcttcatttactaaatttgttccctgctttattaattctctg
agatgaagcctgtgcacatcaagctggcacaaattaatggatatctgaat
aacatgtagcacagccacagtctttgggggactcgatccagacatcagca
ctgggggattctttattttctggaaaaactctgtttagttgagtatgtat
actttcacagaaagaagtctttttgccattggcaggttttcaagggtccc
taaggttgaaatatgatgtaacagcaccagtactttggcactacttgtaa
tttgcaacacatgaaaattcaagaaaggaggataaagagttcaaggctaa
tatcagctacatagcaagttggatgctagcctaggctgcatgagatacta
caaacccaacaaaatgataagtatagcatgaggaagtgtttctttttcac
aatacaatccattaaatgtcgctggtaccaaacaatttcaagttgtctcc
tgtagtaatctagatggacaattctattaccccagaatgttgtcaaatca
ataggttgaacatgaactaccctcatggctagagttgggatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_51330097_51331242
seq2: B6Ng01-305P17.g_70_1212

seq1  GAATTCAAGACCAGCCTAGATAACTTAGTGAGACCCCCCCCCCCATCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACCAGCCTAGATAACTTAGTGAGACCCCCCCCCCCATCTAA  50

seq1  AGTAAAATGTAAAAAGTAAAATAGGGATATAGCTCAGTTGTAGAGTAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAATGTAAAAAGTAAAATAGGGATATAGCTCAGTTGTAGAGTAGCT  100

seq1  GCTTAGAATGTGCAGGACCCTAGGCTTAATGTCTAATTTGTAGTAACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGAATGTGCAGGACCCTAGGCTTAATGTCTAATTTGTAGTAACACA  150

seq1  CACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGA  200

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGATCCATGGAGACAGAATCAGAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGATCCATGGAGACAGAATCAGAATAG  250

seq1  TAGTAGCCAGGAATTGTAGGGAATGGAAAATACAGAGTTCTTCCTTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGCCAGGAATTGTAGGGAATGGAAAATACAGAGTTCTTCCTTTAAT  300

seq1  GAGTACAGTTTTAATTTTAAAGAAGAGCGTGCTATTGAGATTGCACATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACAGTTTTAATTTTAAAGAAGAGCGTGCTATTGAGATTGCACATGT  350

seq1  GTACACTAAAAAACAATTTAACATGCCAGCCTTTATGTTAGTTGTGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTAAAAAACAATTTAACATGCCAGCCTTTATGTTAGTTGTGCTTT  400

seq1  GCCATAAATTTTCAGAGAAAAGTTTCAAATATAGATAAATAATACAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAAATTTTCAGAGAAAAGTTTCAAATATAGATAAATAATACAGAGA  450

seq1  GAAAAACCCAAAAGTGCTGTCTAATACAGGCAAGGTGGCATATACCGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACCCAAAAGTGCTGTCTAATACAGGCAAGGTGGCATATACCGCAC  500

seq1  CACTTGCAAGCAGGACCTGAGCACCGAGCCTCTGGGGCTTTCCTTTGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCAAGCAGGACCTGAGCACCGAGCCTCTGGGGCTTTCCTTTGATT  550

seq1  ACTGCAAGTCTTCATTTACTAAATTTGTTCCCTGCTTTATTAATTCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAAGTCTTCATTTACTAAATTTGTTCCCTGCTTTATTAATTCTCTG  600

seq1  AGATGAAGCCTGTGCACATCAAGCTGGCACAAATTAATGGATATCTGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAGCCTGTGCACATCAAGCTGGCACAAATTAATGGATATCTGAAT  650

seq1  AACATGTAGCACAGCCACAGTCTTTGGGGGACTCGATCCAGACATCAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTAGCACAGCCACAGTCTTTGGGGGACTCGATCCAGACATCAGCA  700

seq1  CTGGGGGATTCTTTATTTTCTGGAAAAACTCTGTTTAGTTGAGTATGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGATTCTTTATTTTCTGGAAAAACTCTGTTTAGTTGAGTATGTAT  750

seq1  ACTTTCACAGAAAGAAGTCTTTTTGCCATTGGCAGGTTTTCAAGGGTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCACAGAAAGAAGTCTTTTTGCCATTGGCAGGTTTTCAAGGGTCCC  800

seq1  TAAGGTTGAAATATGATGTAACAGCACCAGTACTTTGGCACTAACTTGTA  850
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAAGGTTGAAATATGATGTAACAGCACCAGTACTTTGGCACT-ACTTGTA  849

seq1  A-TTGCAACACATGAAAATTCAAGAAAGGAGGATAAAGAGTTCAAGGCTA  899
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAACACATGAAAATTCAAGAAAGGAGGATAAAGAGTTCAAGGCTA  899

seq1  ATATCAGCTACATAGCAAGTTGGATGCTAGCCTAGGCTGCATGAGATACT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGCTACATAGCAAGTTGGATGCTAGCCTAGGCTGCATGAGATACT  949

seq1  ACAAAAACCAACAAAAATGATAAAGTATAGCATGAGGAAGTGTT--CTTT  997
      || ||| ||||| |||||||| ||||||||||||||||||||||   |||
seq2  AC-AAACCCAAC-AAAATGAT-AAGTATAGCATGAGGAAGTGTTTCTTTT  996

seq1  TCACAATACAATCCATTAAATGTCGCTGGTACCCAAACATTTCAAGGTTG  1047
      ||||||||||||||||||||||||||||||||| ||  ||||||| ||||
seq2  TCACAATACAATCCATTAAATGTCGCTGGTACCAAACAATTTCAA-GTTG  1045

seq1  TCTCCTGTAGTAATCTAGATGGGACAATTCTAT--ACCCAGGATGTTGTA  1095
      |||||||||||||||||||| ||||||||||||   ||||| ||||||| 
seq2  TCTCCTGTAGTAATCTAGAT-GGACAATTCTATTACCCCAGAATGTTGTC  1094

seq1  AATTTAATAGGTTGAGCATG-ACTACCCCTCATGGCTAGAAGTTTGGGAT  1144
      || | |||||||||| |||| |||| ||||||||||||||   |||||||
seq2  AAATCAATAGGTTGAACATGAACTA-CCCTCATGGCTAGA--GTTGGGAT  1141

seq1  AT  1146
      ||
seq2  AT  1143


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