BAC Information

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BAC

Clone NameB6Ng01-306L13
Chromosome17 (Build37)
Map Location 19,520,685 - 19,595,281
singlet/doubletdoublet
Overlap geneEG665376
Upstream geneLOC100041612, Vmn2r95, Vmn2r-ps114, EG433070, Vmn2r-ps115, Vmn2r-ps117, LOC100042183, EG627367, EG224552, LOC665344, LOC627466, LOC627476, EG665371
Downstream geneEG627537, EG627576, EG224572, EG627618, EG627636, LOC100042273, LOC210465, LOC670534, EG627664, V2r7, LOC100041856, EG545190, Fpr-rs7, Fpr-rs6, EG627743, EG224576, V2r6, EG637720, EG665525, EG627805
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306L13.bB6Ng01-306L13.g
ACCGA099678GA099679
length939507
definitionB6Ng01-306L13.b B6Ng01-306L13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,520,685 - 19,521,261)(19,594,775 - 19,595,281)
sequence
gaattcatttatttaggtacaatctaatcgtggtgcccactctgtggcaa
ccctcccacggttcattaactcattccttcacctctatcttggcttttct
gcttcctaaacttctgaaactctgtgggatacatcctatgtgttctgtgc
tttcttgggtaataccaacttagtggtgagaacatataatgtatttcctt
ttgggtctagattaccacactcagaatgatattttctagttttatacatt
gtctttcaattttcattatgcccttgatcttaataactgagtaatatttc
aatgtgtaaatgtgccacatattctgtatccattcttctgttataggaca
tgtgttccttccagcttttggtctcttacaaacaaggccactataaacat
atataagcaggtgtcccttcatatgttgggccattttttgtgtatatatc
cgaaaggggtatatctaggtatttctatttccaattttctgaggaactac
caggtatatttcaaaaatggttgtactagtttgaaatcccaaaattattg
gatggatccccaggtgggacagtctctgaatggtcattccttcagtctct
gctacaaactttatccctgtaactccttccatggatactttgttccccct
tctaggaaggattgaaatatctaccatttgtcttccttcttttgagtttc
atgtgttttgcaaattgtatcttgggtattctgagtttctgggctaatat
ccacttcccagtgagtgaatatcatgtgtgttcttttgtgatttggttac
ctcacttaggattatatcctccagatccacccatttgtgtaagaatttca
taaatttattgtttctaagagctgcatactactccattgtgtacatgtat
ccattcatctgttgagggtcatctgtgttctttccagct
gaattctcaacagaggaacctcaagggccaagaagcagttaaagaaatta
tcaaagtcttcagtcaccagggaaaagcaaatgaaaataaaatcttaaaa
caagggaaaagaagccactcgattcaagtacacagacaaaacttctttaa
tgctcagtttctcaacagtgctccatgagtaaccaagctaaaatccaagg
tgatatggaattctaaacatgtgcaaataagtagtaacatagactcaaat
gactggcccataggtgcattaatcaccacctattttcattaaatatttca
gcagaatgtgttttctttaaggtaggttaaatattctcaaataactgttt
atggctttctgggcattactaagttgtctgtatatctttttgcattttct
catgatctggccacattaacagcatacatatatgtatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_19520685_19521261
seq2: B6Ng01-306L13.b_48_624

seq1  GAATTCATTTATTTAGGTACAATCTAATCGTGGTGCCCACTCTGTGGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATTTAGGTACAATCTAATCGTGGTGCCCACTCTGTGGCAA  50

seq1  CCCTCCCACGGTTCATTAACTCATTCCTTCACCTCTATCTTGGCTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCACGGTTCATTAACTCATTCCTTCACCTCTATCTTGGCTTTTCT  100

seq1  GCTTCCTAAACTTCTGAAACTCTGTGGGATACATCCTATGTGTTCTGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTAAACTTCTGAAACTCTGTGGGATACATCCTATGTGTTCTGTGC  150

seq1  TTTCTTGGGTAATACCAACTTAGTGGTGAGAACATATAATGTATTTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGGTAATACCAACTTAGTGGTGAGAACATATAATGTATTTCCTT  200

seq1  TTGGGTCTAGATTACCACACTCAGAATGATATTTTCTAGTTTTATACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCTAGATTACCACACTCAGAATGATATTTTCTAGTTTTATACATT  250

seq1  GTCTTTCAATTTTCATTATGCCCTTGATCTTAATAACTGAGTAATATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCAATTTTCATTATGCCCTTGATCTTAATAACTGAGTAATATTTC  300

seq1  AATGTGTAAATGTGCCACATATTCTGTATCCATTCTTCTGTTATAGGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTAAATGTGCCACATATTCTGTATCCATTCTTCTGTTATAGGACA  350

seq1  TGTGTTCCTTCCAGCTTTTGGTCTCTTACAAACAAGGCCACTATAAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCCTTCCAGCTTTTGGTCTCTTACAAACAAGGCCACTATAAACAT  400

seq1  ATATAAGCAGGTGTCCCTTCATATGTTGGGCCATTTTTTGTGTATATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGCAGGTGTCCCTTCATATGTTGGGCCATTTTTTGTGTATATATC  450

seq1  CGAAAGGGGTATATCTAGGTATTTCTATTTCCAATTTTCTGAGGAACTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAGGGGTATATCTAGGTATTTCTATTTCCAATTTTCTGAGGAACTAC  500

seq1  CAGGTATATTTCAAAAATGGTTGTACTAGTTTGAAATCCCAAAATTATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATATTTCAAAAATGGTTGTACTAGTTTGAAATCCCAAAATTATTG  550

seq1  GATGGATCCCCAGGTGGGACAGTCTCT  577
      |||||||||||||||||||||||||||
seq2  GATGGATCCCCAGGTGGGACAGTCTCT  577

seq1: chr17_19594775_19595281
seq2: B6Ng01-306L13.g_68_574 (reverse)

seq1  ATATATATATATATATATATATATATATATATATATATATATATATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATATATATATATAT  50

seq1  ATATATATATATATATATATATACATATATGTATGCTGTTAATGTGGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATACATATATGTATGCTGTTAATGTGGCCA  100

seq1  GATCATGAGAAAATGCAAAAAGATATACAGACAACTTAGTAATGCCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGAGAAAATGCAAAAAGATATACAGACAACTTAGTAATGCCCAGA  150

seq1  AAGCCATAAACAGTTATTTGAGAATATTTAACCTACCTTAAAGAAAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATAAACAGTTATTTGAGAATATTTAACCTACCTTAAAGAAAACAC  200

seq1  ATTCTGCTGAAATATTTAATGAAAATAGGTGGTGATTAATGCACCTATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCTGAAATATTTAATGAAAATAGGTGGTGATTAATGCACCTATGG  250

seq1  GCCAGTCATTTGAGTCTATGTTACTACTTATTTGCACATGTTTAGAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCATTTGAGTCTATGTTACTACTTATTTGCACATGTTTAGAATTC  300

seq1  CATATCACCTTGGATTTTAGCTTGGTTACTCATGGAGCACTGTTGAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCACCTTGGATTTTAGCTTGGTTACTCATGGAGCACTGTTGAGAAA  350

seq1  CTGAGCATTAAAGAAGTTTTGTCTGTGTACTTGAATCGAGTGGCTTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCATTAAAGAAGTTTTGTCTGTGTACTTGAATCGAGTGGCTTCTTT  400

seq1  TCCCTTGTTTTAAGATTTTATTTTCATTTGCTTTTCCCTGGTGACTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGTTTTAAGATTTTATTTTCATTTGCTTTTCCCTGGTGACTGAAG  450

seq1  ACTTTGATAATTTCTTTAACTGCTTCTTGGCCCTTGAGGTTCCTCTGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGATAATTTCTTTAACTGCTTCTTGGCCCTTGAGGTTCCTCTGTTG  500

seq1  AGAATTC  507
      |||||||
seq2  AGAATTC  507