BAC Information

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BAC

Clone NameB6Ng01-311J07
Chromosome17 (Build37)
Map Location 60,973,421 - 60,974,417
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043549
Downstream geneLOC433129, EG620725, LOC100043560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311J07.bB6Ng01-311J07.g
ACCGA103264GA103265
length1,0561,160
definitionB6Ng01-311J07.b B6Ng01-311J07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagtccctcaacagaagaatggataaggagaatatggtccattt
acatgatagagtagtactcagcccttaaaaaataacatcatggaatttga
aggctaatgaatataactagaaagaaaaatcaatctgattgaggtaacaa
aggcttggaatgacaaatatgatatggatttacatatatctggatatacg
attaaatagaaggtaaccaaactataatcagtagacctgaaaaggttagt
caaagacaaagggactagagtggaaccttgcatctcccagggaaggaaaa
tagaacagagtttatgaatggacaggagccaggctggggtgtgctaggga
agataatggaaacatcaggtgggaagggagaagagagacttagagaagga
atgtggggagagacacctcaaattcatcagcctttgagcagtggtatgga
aatctagtgcagtgtaaagttcctacaatatatgaaattaaccctaatga
agtctccaaataatgagaaagatggaaccctagctggccatctctggtca
ccagagaagcttacaataccaaatctgagttcaatctttatttactcttt
tcctatgttttgtattacacacatccattgtgcatactcacaaacaggtt
tgttactttccatttcctagagttaacatccagacatttactttctagat
cttctgggaaagtacagactttatactcatcaacagacacatctcagagt
ggttctcctagtgtttaattacaagtgtattgatatgaaacattcaattg
ttaacattatacttctatgtatctttataattacgcatttggctaagaat
tctaattattttgacagcactgcaacagttagatttataataacattaaa
atctcttaagatactgtgtaggttagtcttgtttttagatgcacaaatta
tttctttttcctttttttgttattgtatttattatttatttttatattcg
ccaaggacaccaaaattcttttttttttccatatattattagggaattag
ctcatt

gaattcaagaagctaaccaccaaaaacccaaaacaacccaataaaaaaaa
aatggagtatagaactaacccaagaattcacaacagaggagtctcagatg
gctgagaagcacctaaagaaatattcaaagtccgtagtgatcagagaaat
gcaaatcaaaatgaccctgagagtccaccttacaccaaacagaatggcta
agacaaaaacctcaggtgacaacacatgttggtgaggatggggagaaaga
ggaacatttctctattcctggtaggattgcaagctagtacaaacactctg
gaaatcagtctggaggttcctcagaaaattggaaatagatctacctgaag
acctagcaataccactcttgagaatatacccaaaagatgcaccaccatgc
cacaggggcctgtgttccactatgttcatagtagccatatttgtgatagc
cagaagctgaaaacaacccagatgtcccacgacagaagaaaggatacaga
aaatgtggttcatttacacaatgaaatactacaaagctattaagaatgag
gacatcctgagttttaaggcaaatggaaactagaaaataatatcttgagt
gaggtaactcagacgcaaaaggacatacatggtatgtactcaataataag
tagatattagccaaaaagaaaagaaaagaaaagaaaagaaatgaaatgaa
aaagtacagaatacccaagatacagtccacagaactcaaaaaggtcaaca
agctgaagggcccaagtgaggacacctcagtcccaactgggagggagaag
aaagcaattacaaatgggaagggagagacagacctggaagggaaagtgga
caggggtctgggggctgttttgagggagagaggaacctgatatggcactg
agggaaaagaactgaagctctgagcgccagtagaaaagaagaagaaacat
gcaacctcgaggaggtagaggtatgggaccctccagaatgcaccagagac
tggaagtgaaaactcctcaggacctcaagggaggactttagatgaaatac
ctgagtggcatgaggaacttatagagccgactccaacagagattgcatca
atgaggacgctgtcatcatagtcaacctcaccctaattctgatccacgtg
ctcgatgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_60973421_60974417
seq2: B6Ng01-311J07.b_114_1101

seq1  CAGCCCTTAAAAAATAACATCATGGAATTTGAAGGCTAATGAATATAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTTAAAAAATAACATCATGGAATTTGAAGGCTAATGAATATAACT  50

seq1  AGAAAGAAAAATCAATCTGATTGAGGTAACAAAGGCTTGGAATGACAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAAATCAATCTGATTGAGGTAACAAAGGCTTGGAATGACAAAT  100

seq1  ATGATATGGATTTACATATATCTGGATATACGATTAAATAGAAGGTAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATGGATTTACATATATCTGGATATACGATTAAATAGAAGGTAACC  150

seq1  AAACTATAATCAGTAGACCTGAAAAGGTTAGTCAAAGACAAAGGGACTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATAATCAGTAGACCTGAAAAGGTTAGTCAAAGACAAAGGGACTAG  200

seq1  AGTGGAACCTTGCATCTCCCAGGGAAGGAAAATAGAACAGAGTTTATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAACCTTGCATCTCCCAGGGAAGGAAAATAGAACAGAGTTTATGAA  250

seq1  TGGACAGGAGCCAGGCTGGGGTGTGCTAGGGAAGATAATGGAAACATCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGGAGCCAGGCTGGGGTGTGCTAGGGAAGATAATGGAAACATCAG  300

seq1  GTGGGAAGGGAGAAGAGAGACTTAGAGAAGGAATGTGGGGAGAGACACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAGGGAGAAGAGAGACTTAGAGAAGGAATGTGGGGAGAGACACCT  350

seq1  CAAATTCATCAGCCTTTGAGCAGTGGTATGGAAATCTAGTGCAGTGTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCATCAGCCTTTGAGCAGTGGTATGGAAATCTAGTGCAGTGTAAA  400

seq1  GTTCCTACAATATATGAAATTAACCCTAATGAAGTCTCCAAATAATGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTACAATATATGAAATTAACCCTAATGAAGTCTCCAAATAATGAGA  450

seq1  AAGATGGAACCCTAGCTGGCCATCTCTGGTCACCAGAGAAGCTTACAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGAACCCTAGCTGGCCATCTCTGGTCACCAGAGAAGCTTACAATA  500

seq1  CCAAATCTGAGTTCAATCTTTATTTACTCTTTTCCTATGTTTTGTATTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCTGAGTTCAATCTTTATTTACTCTTTTCCTATGTTTTGTATTAC  550

seq1  ACACATCCATTGTGCATACTCACAAACAGGTTTGTTACTTTCCATTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCCATTGTGCATACTCACAAACAGGTTTGTTACTTTCCATTTCCT  600

seq1  AGAGTTAACATCCAGACATTTACTTTCTAGATCTTCTGGGAAAGTACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTAACATCCAGACATTTACTTTCTAGATCTTCTGGGAAAGTACAGA  650

seq1  CTTTATACTCATCAACAGACACATCTCAGAGTGGTTCTCCTAGTGTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATACTCATCAACAGACACATCTCAGAGTGGTTCTCCTAGTGTTTAA  700

seq1  TTACAAGTGTATTGATATGAAACATTCAATTGTTAACATTATACTTCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGTGTATTGATATGAAACATTCAATTGTTAACATTATACTTCTAT  750

seq1  GTATCTTTATAATTACGCATTTGGCTAAGAATTCTAATTATTTTGACAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTTATAATTACGCATTTGGCTAAGAATTCTAATTATTTTGACAGC  800

seq1  ACTGCAACAGTTAGATTTATAATAACATTAAAATCTCTTAAGATACTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAACAGTTAGATTTATAATAACATTAAAATCTCTTAAGATACTGTG  850

seq1  TAGGTTAGTCTTGTTTTTAGATGCACAAAATTTATTTCTTTTTTTCTTTT  900
      |||||||||||||||||||||||||||||  |||||||         |||
seq2  TAGGTTAGTCTTGTTTTTAGATGCACAAA--TTATTTC---------TTT  889

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCAGGAC  950
      ||  ||||||| || || | ||| || ||| ||||| | || |||| |  
seq2  TTCCTTTTTTTGTTATTGTATTTATTATTTATTTTTATATTCGCCAAGGA  939

seq1  CAC--AGATTCTTTTTTTTTTCCATTTATTATTAGGTATTTAGCTCATT  997
      |||  | |||||||||||||||||| |||||||||| | ||||||||||
seq2  CACCAAAATTCTTTTTTTTTTCCATATATTATTAGGGAATTAGCTCATT  988


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