BAC Information

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BAC

Clone NameB6Ng01-312E05
Chromosome17 (Build37)
Map Location 51,357,742 - 51,358,219
singlet/doubletsinglet
Overlap geneLOC100043451
Upstream geneEG628747, LOC100043818, Dazl, Plcl2, EG654432, Tbc1d5
Downstream geneLOC100043452, Satb1, EG628919
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312E05.bB6Ng01-312E05.g
ACCGA103776GA103777
length4721,179
definitionB6Ng01-312E05.b B6Ng01-312E05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tttctccctagatatgtttaagtctgtgtcaagttggcagacatcaacca
gcacaagtaccttcttaagaatggtagtgattcaggccaaggtctggaaa
gtaagaaaggctaggctggctcagtgtagtgatatcctggaacttatacc
ctggataagcagtggagggtggagagaaaggccatctcatcatgaataca
ttaggccagtgctgtagggacgagaactctagctcttaatagtagtgctg
caaagagggcaccctcaagttgagtcccagaatgtcaaaatccaggccca
gactatcgagggcatttaggaaatctagatttgtaggtaaagatacaaat
gtggatacaaagtttattgttaacaagatccagtctaagcactgtacatt
ggtgattattggcttccaaaaatgagagggagggagtaagggaaggagca
ggaagggagagagagaggggga

gaattcagtaaacaaacagaactatataggacaactcaagctgaaataaa
gatagaatttaaaaactcaatccaattagaaaagccaaaggggaaagtct
aatcagtacaatagattgagaagatggaataccaggacttgaattgaaaa
aaaaattgtaccactaaaagaatatgaaatattaagcacacatacaaaca
caatattccagaaattagaaataccataaaaacattaaatctatataaca
atggaggaggaagggtagaacacactatacctttcaataactttagtaat
ggtctaaactccatcaaaacatgagtatgtaatagattaagaaatatatt
ccagttatttttttctacacgataactcccttttcagaagaagaaacacg
tcacaatgaaaggatgagaaaaagtattctaaatagatggagccaggaag
caactaaagtgtcgctaccttaacatctaacaaaacgttggcaacttaag
attaaccaaaagagataaagaaaggtacttcattctggcctggggatatt
ataaccaagaagatattaaaattttagacatatatgtaccaaatttaagt
acatatggctgagcaaaacaaagattaattctaactcaaaagtatttcag
taccctactttctgcaatggatgggcaatctagtcaaaaactgaacagag
aaacatcagaactaagtgacaatatatatcaaaataacctaacaaatatt
tatagagtatcataactagataccaaatctacataatgtgcacagcacta
catgaaagtttctataaaacagaccatatactgagacacatacagatctg
accaaatacctaattattgaaatggctcagtatgacttaaaaacaaagtc
taaagtcaacaggaaaaaatctacagcacacaaactcatgggatgatatc
aacacattaccaaatgatgactagatcaagaaaacagaaagaaaatacaa
atttaaataaactgaaacacacatacaaacatctgagacactgaagcagt
cctgtgagaagaaatatagttaagtgctacataataataaattttttaaa
cagttaagagaaccctataataccattaaacaactcaagatctaattgac
caagaaggctaagttcaactcctctccgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_51357742_51358219
seq2: B6Ng01-312E05.b_47_524 (reverse)

seq1  TCCCCCTCTCTCTCTCCCTTCCTGCTCCTTCCCTTACTCCCTCCCTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCTCTCTCTCTCCCTTCCTGCTCCTTCCCTTACTCCCTCCCTCTCA  50

seq1  TTTTTGGAAGCCAATAATCACCAATGTACAGTGCTTAGACTGGATCTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGAAGCCAATAATCACCAATGTACAGTGCTTAGACTGGATCTTGT  100

seq1  TAACAATAAACTTTGTATCCACATTTGTATCTTTACCTACAAATCTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATAAACTTTGTATCCACATTTGTATCTTTACCTACAAATCTAGAT  150

seq1  TTCCTAAATGCCCTCGATAGTCTGGGCCTGGATTTTGACATTCTGGGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAATGCCCTCGATAGTCTGGGCCTGGATTTTGACATTCTGGGACT  200

seq1  CAACTTGAGGGTGCCCTCTTTGCAGCACTACTATTAAGAGCTAGAGTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGAGGGTGCCCTCTTTGCAGCACTACTATTAAGAGCTAGAGTTCT  250

seq1  CGTCCCTACAGCACTGGCCTAATGTATTCATGATGAGATGGCCTTTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCTACAGCACTGGCCTAATGTATTCATGATGAGATGGCCTTTCTCT  300

seq1  CCACCCTCCACTGCTTATCCAGGGTATAAGTTCCAGGATATCACTACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTCCACTGCTTATCCAGGGTATAAGTTCCAGGATATCACTACACT  350

seq1  GAGCCAGCCTAGCCTTTCTTACTTTCCAGACCTTGGCCTGAATCACTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGCCTAGCCTTTCTTACTTTCCAGACCTTGGCCTGAATCACTACC  400

seq1  ATTCTTAAGAAGGTACTTGTGCTGGTTGATGTCTGCCAACTTGACACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAAGAAGGTACTTGTGCTGGTTGATGTCTGCCAACTTGACACAGA  450

seq1  CTTAAACATATCTAGGGAGAAAGAATTC  478
      ||||||||||||||||||||||||||||
seq2  CTTAAACATATCTAGGGAGAAAGAATTC  478


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