MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-312M11
Chromosome	17 (Build37)
Map Location	51,182,314 - 51,182,763
singlet/doublet	singlet
Overlap gene	Tbc1d5
Upstream gene	Rftn1, EG668475, EG628747, LOC100043818, Dazl, Plcl2, EG654432
Downstream gene	LOC100043451, LOC100043452, Satb1, EG628919
Link	Open Mouse BAC browser

Click to get alignment info.

name	Rftn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76438 MGI:1923688
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668475 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668475 MGI:3644386
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG628747 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628747 MGI:3648042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100043818 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043818
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Dazl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13164 MGI:1342328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plcl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224860 MGI:1352756
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG654432 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:654432 MGI:3647393
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 66 ESTs, 10 Proteins pseudo : _no_value

name	Tbc1d5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72238 MGI:1919488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043451 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043451
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	LOC100043452 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043452
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Satb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20230 MGI:105084
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG628919 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628919 MGI:3648115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Rftn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130664 GeneID:76438 MGI:1923688
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : raftlin lipid raft linker 1 transcript_id : NM_181397.2

name	EG628747 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268734 GeneID:628747 MGI:3648042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG628747 transcript_id : XM_893520.2

name	Dazl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384107 GeneID:13164 MGI:1342328
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : deleted in azoospermia-like transcript_id : NM_010021.3

name	Plcl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802121 GeneID:224860 MGI:1352756
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase C-like 2 transcript_id : NM_013880.2

name	Tbc1d5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:36287143 GeneID:72238 MGI:1919488
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1 domain family, member 5 transcript_id : NM_028162.2

name	LOC100043451 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268736 GeneID:100043451
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : similar to retinitis pigmentosa GTPase regulator interacting protein 1 transcript_id : XM_001480189.1

name	Satb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677850 GeneID:20230 MGI:105084
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : special AT-rich sequence binding protein 1 transcript_id : NM_009122.1

name	EG628919 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268740 GeneID:628919 MGI:3648115
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG628919 transcript_id : XM_893730.3

name	Rftn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859813 CCDS:CCDS28873.1 GeneID:76438 MGI:1923688
definition	codon_start : 1 product : raft-linking protein protein_id : NP_852062.1

name	EG628747 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268735 GeneID:628747 MGI:3648042
definition	codon_start : 1 product : hypothetical protein protein_id : XP_898613.2

name	Dazl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542549 GeneID:13164 MGI:1342328
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0003730 - mRNA 3'-UTR binding [Evidence IDA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008494 - translation activator activity [Evidence IDA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007281 - germ cell development [Evidence IMP]; GO:0048477 - oogenesis [Evidence IEA]; GO:0045836 - positive regulation of meiosis [Evidence IMP]; GO:0045948 - positive regulation of translational initiation [Evidence IDA]; GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : deleted in azoospermia-like protein_id : NP_034151.2

name	Plcl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46309571 CCDS:CCDS28875.1 GeneID:224860 MGI:1352756
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : phospholipase C, epsilon 2 product : phospholipase C-like 2 protein_id : NP_038908.1

name	Tbc1d5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:36287144 GeneID:72238 MGI:1919488
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : TBC1 domain family, member 5 protein_id : NP_082438.2

name	LOC100043451 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268737 GeneID:100043451
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480239.1

name	Satb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677851 CCDS:CCDS28876.1 GeneID:20230 MGI:105084
definition	GO_component : GO:0005720 - nuclear heterochromatin [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0006325 - establishment and/or maintenance of chromatin architecture [Evidence IDA]; GO:0016571 - histone methylation [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : special AT-rich sequence binding protein 1 protein_id : NP_033148.1

name	EG628919 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268741 GeneID:628919 MGI:3648115
definition	codon_start : 1 product : similar to predicted protein protein_id : XP_898823.3

name	EG668475 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668475
definition	number : 1 pseudo : _no_value

name	LOC100043818 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043818
definition	number : 1 pseudo : _no_value

name	LOC100043452 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043452
definition	number : 2 pseudo : _no_value

name	LOC100043452 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043452
definition	number : 1 pseudo : _no_value

name	EG654432 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:84781715 GeneID:654432 MGI:3647393
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 66 ESTs, 10 Proteins product : predicted gene, EG654432 pseudo : _no_value transcript_id : NR_002700.1

clone name	MSMg01-305L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334F17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-312M11.b	B6Ng01-312M11.g
ACC	GA104165	GA104166
length	454	1,100
definition	B6Ng01-312M11.b	B6Ng01-312M11.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	taagatgctggttcaatccctgggaatggaccaccaaccaaagagtacac atggagggacccatgactctagctgcatttgtggcaaaggttgggcttgt tggacaacagtggtaggagatgcccttgggcctgaaggtgctcaatgccc cagtatagaagggagtgggtggatgagtgggggagcaccctcatagaagc aggggaagaagggatgggatgggggctttccataggggagacctggaaag gggaaaacatttgaaatgtaaattaagcaaatatccaatagaatgctggt tcaagactagtctccaggaaaaactgttttttattaattttttatcttgt caatgtttgtacactaaaatccccccactatagctaaattttccataatg tttaggtggtaatgctattttccttaagaattcataagtttgtatatttg gata	gaattctgtatttgatgtgtgataacggcccaacattgtcttccacatgt aaatatccatttctcccaacactatttattgaagaaaagggccttttgct attgtgtgttattgactcctttataaaataccaatttagatgtagagcat ggtcctctttggaggatttctagatgattccattggtctaaacacctact cgtatcctagtatcaggctacttaaaaaaaattattattattttagcttt acagtatattttgaaatcaggtagtattgctgttccgagctttactcttc ttctctggccattttgatcctaggtggttccatttaagttaaaaggctaa ctttttacttctacaaagattaatactgaaatcttaatgtttattgcatt ggatatgtgcattactttgggtaatatatttgtttcaacaatgttaattc ttctagcacatgaaaatatgttagttactgttctattgttatgaaaagat accatgaccaaggcaactcttagaaaatatttaattggggtttgcttaca attttagaaagctagtcttatgatcatcatgaagaaaatcaggcagacat ggcactggtgtggtatctgaaaacttccttcatgatccacaggcaacaga ccaaaagagaatgatactgggcctaacatgggccttggaaacctcaaagc cctgggaaacactgtctccaacaaggccacacccactccaacaaggctac agctgctccagcaaggccatgcctcttcttctcaaacattttgatactgg aggactatacgtgcaaatacatggtggaggactattttcattcaaccacc acaacatgaagatacttttatttggtctcttcaatttatccctaatatta gttcatgtacaactatctccttttgctctggcttatgttaatctgattgg gatgaggcatcatcatgatcttgttcctacattcgaactcattgagggtc aatcatcatgtgaatttaaacattccaatagattgttctaacctgcggtc aggttcaggctaggtcgactgtagttaggcagttgatagaactagttgga
quality values	Open. Hide. 62 56 47 62 41 31 47 62 54 62 49 62 62 44 34 62 59 62 62 49 49 62 62 62 59 43 46 43 43 26 29 33 31 56 54 62 62 62 59 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 49 49 62 62 59 62 59 59 59 62 62 62 62 59 62 62 49 49 48 62 62 62 62 62 62 59 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 54 62 54 54 49 35 54 62 62 62 62 59 62 46 48 62 62 56 62 59 62 62 62 62 59 62 59 59 62 59 62 62 59 49 62 62 62 54 59 62 62 62 62 56 59 51 43 34 46 34 23 34 24 18 50 46 43 59 46 46 46 48 28 45 19 23 23 23 34 50 48 36 33 18 13 13 9 13 18 18 34 27 39 36 49 49 50 50 43 36 27 45 36 46 39 34 17 19 18 26 25 24 33 28 25 24 34 27 33 18 23 34 34 45 34 34 34 29 34 39 34 30 13 7 27 23 18 16 7 23 23 9 10 23 27 18 22 43 34 27 23 23 22 30 34 24 18 19 28 13 10 18 23 23 13 13 13 31 30 40 39 46 30 43 36 24 24 21 18 14 12 19 19 30 13 14 13 11 13 11 16 10 16 14 18 23 18 13 23 30 18 25 28 23 25 24 21 11 10 10 9 10 10 39 27 34 17 27 18 27 34 34 34 24 30 24 23 24 34 23 18 16 17 8 18 18 35 27 17 13 24 22 24 12 7 14 26 33 22 13 21 34 22 7 11 24 13 24 24 24 22 11 11 10 13 12 8 18 10 16 31 21 27 40 24 12 23 21 19 18 23 12 24	Open. Hide. 62 59 51 47 62 62 59 59 62 62 46 56 50 32 29 27 29 46 46 62 62 59 59 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 59 59 62 62 62 62 62 62 62 54 54 54 54 54 54 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 56 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 54 30 26 19 16 19 32 54 58 58 58 58 58 58 58 58 58 58 54 52 58 58 43 58 58 58 58 58 54 58 54 58 58 58 58 58 54 58 54 58 52 58 54 58 58 58 58 58 53 51 54 45 58 51 48 54 51 58 49 54 48 58 58 58 58 58 53 53 58 58 58 58 48 44 49 58 58 58 58 58 50 49 30 49 41 41 49 58 58 39 40 44 40 51 34 58 51 54 49 49 54 53 58 41 49 24 58 58 58 46 39 52 53 58 41 51 50 40 54 54 54 54 49 51 49 35 51 53 52 49 40 50 21 40 50 54 49 44 52 40 53 54 50 41 45 51 39 40 45 53 37 35 52 38 45 38 37 45 40 53 45 40 52 53 51 54 31 54 54 54 52 37 42 33 13 32 40 45 34 45 31 33 41 33 36 36 32 31 31 47 47 32 52 40 45 45 36 32 31 40 52 33 53 53 51 31 36 31 41 30 31 33 45 31 30 31 38 33 35 28 45 29 28 30 15 46 30 29 27 31 31 31 30 8 27 29 46 46 41 25 46 15 46 28 26 35 38 32 29 31 31 31 46 33 32 31 38 33 33 27 28 31 18 46 31 32 31 26 32 27 38 38 46 31 26 31 30 31 24 32 19 31 31 31 28 22 21 48 34 38 46 30 22 29 30 32 31 31 32 31 25 26 19 31 29 26 14 25 29 18 33 20 29 14 21 38 27 27 33 34 18 31 19 18 27 20 13 26 15 18 31 26 31 22 25 33 32 34 34 38 26 28 32 29 28 20 14 26 17 19 21 19 32 23 33 24 25 15 26 11 10 4 29 25 31 32 19 43 23 17 14 33 48 48 30 21 32 7 8 7 21 28 6 7 10 20 29 21 32 32 32 21 32 9 15 25 14 14 47 13 14 11 10 9 21 22 27 6 5 10 11 6 9 14 13 7 11 11 40 47 21 11 10 20 17 22 15 20 4 7 12 28 29 10 15 10 6 16 20 19 20 7 6 7 28 6 7 23 27 34 34 19 20 13 34 22 8 7 25 6 4 11 12 27 24 16 13 11 29 3 8 6 11 28 17 3 6 7 6 10 12 3 5 1 5 12 3 8 5 25 5 5 14 4 16 9 8 8 10 6 5 4 12 6 21 28 17 7 11 3 2 4 2 11 17 24 20 6 4 8 6 15 3 9 1 4 9 4 2 4 12 8 26 11 2 4 8 9 4 8 6 4 3 6 13 8 12 25 9 20 21 9 9 8 5 7 12 5 9 11 7 5 11 4 11 7 12 5 20 17 8 11 7 9 20 21 4 3 3 11 23 2 2 4 5 1 3 5 5 1 2 12 15 14 15 7 5 24 17 4 10 9 9 9 4 1 1 3 6 8 6 4 2 2 2 2 1 4 4 5 12 4 7 6 7 11 4 6 11 3 3 1 2 1 3 16 7 4 2 2 3 3 2 3 4 8 9 4 2 2 5 21 3 2 1 4 6 1 4 4 5 5 2 2 5 3 3 2 3 6 8 9 8 24 13 6 5 6 16 15 5 6 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_51182314_51182763
seq2: B6Ng01-312M11.b_46_497

seq1  GAATTCTAAGATGCTGGTTCAATCCCTGGGAATGGACCACCAACCAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGATGCTGGTTCAATCCCTGGGAATGGACCACCAACCAAAGA  50

seq1  GTACACATGGAGGGACCCATGACTCTAGCTGCATTTGTGGCAAAGGTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACATGGAGGGACCCATGACTCTAGCTGCATTTGTGGCAAAGGTTGG  100

seq1  GCTTGTTGGACAACAGTGGTAGGAGATGCCCTTGGGCCTGAAGGTGCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTGGACAACAGTGGTAGGAGATGCCCTTGGGCCTGAAGGTGCTCA  150

seq1  ATGCCCCAGTATAGAAGGGAGTGGGTGGATGAGTGGGGGAGCACCCTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCAGTATAGAAGGGAGTGGGTGGATGAGTGGGGGAGCACCCTCAT  200

seq1  AGAAGCAGGGGAAGAAGGGATGGGATGGGGGCTTTCCATAGGGGAGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGGGGAAGAAGGGATGGGATGGGGGCTTTCCATAGGGGAGACCT  250

seq1  GGAAAGGGGAAAACATTTGAAATGTAAATTAAGCAAATATCCAATAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGGGAAAACATTTGAAATGTAAATTAAGCAAATATCCAATAGAAT  300

seq1  GCTGGTTCAAGACTAGTCTCCAGGAAAAACTGTTATAAATTAAGTTTTTA  350
      |||||||||||||||||||||||||||||||||| |  ||||| ||||||
seq2  GCTGGTTCAAGACTAGTCTCCAGGAAAAACTGTTTTTTATTAATTTTTTA  350

seq1  TCTTGTCAATG-TTGTACACAAAAATCCCCCCACTATAGCTAAA-TTTCC  398
      ||||||||||| |||||||| ||||||||||||||||||||||| |||||
seq2  TCTTGTCAATGTTTGTACACTAAAATCCCCCCACTATAGCTAAATTTTCC  400

seq1  ATAATGTTTAGGTGGTAATGTTATTTTCCTTAAGAATTCACAAGTCTGTA  448
      |||||||||||||||||||| ||||||||||||||||||| |||| ||||
seq2  ATAATGTTTAGGTGGTAATGCTATTTTCCTTAAGAATTCATAAGTTTGTA  450

seq1  TA  450
      ||
seq2  TA  452

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information