BAC Information

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BAC

Clone NameB6Ng01-312N08
Chromosome17 (Build37)
Map Location 77,805,392 - 77,806,495
singlet/doubletsinglet
Overlap genenone
Upstream geneEG624348, LOC545234
Downstream geneLOC100043887, LOC668795, LOC383275, Crim1, Fez2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-312N08.bB6Ng01-312N08.g
ACCGA104205GA104206
length1,1061,151
definitionB6Ng01-312N08.b B6Ng01-312N08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgctattgcgcaacagggattggtacattcgattatttgatt
tatctatttatttctggagaaaatagcatgtaaatgaaatcaatgttgca
tatttcattggtaacaggcatgagagagaaatagttcatgtattttgtgc
ctaacagtcaacaccaggggtggcatcgtactgtaaaagcagctcttgtc
ccttgtagcttttggttagtgtagtaagtaacaaatgcatagcttaacaa
caataaaacacatttatgtaacattagggttttacaaaaatctagatcac
ttttttgatatactctttagtaaagtaagaattttgaataactctagagc
agtagttctcaactttactaatgctgcacccctttaatactgttccttgt
gttgtggcaactgtaactgtaattttgctactataatgaattgtaatgag
aacacttatgtgacagatttttgatatatgtctccatgagaggtggtgac
tcacatctttagagactgactctactggaatgataaggcaatggactgaa
ctgaggtcctcatggttgcactgaaatcaccttacccactgatgtataac
cacctctcaagacctaaaaacatctttaacatttctaaattacatgtctt
tattttgtgtgtttatggatgtgtggtggtcagactataccttgtggaaa
ttggttttctcttctcatgttgtggccccctgatccacaggcatgatcac
taatgtgttttcataccacatcacctcactgaaaccatattttaaaagtg
atacaaaagtattcccatgaaaaataaatgaaataactggcagtaggcac
acacttaaaaatataccaaaacaggatgtgtaaaaataactgattgacca
caatttgaaactatacaaagtttgaaaccaagtagttctagaaaatttag
ttatacagaatgctattaattgtgtaaaacaatactattaatccattgca
gttaaaaatggatgtatacttcaagagttccatgaaacagtattaaaaac
agtgtcattgaagtcatgatcataaagtcatccttatttatagtaagaga
ataaaa
gaattctctgttagttctttctgcatcctgtttcttaattgggttacgtg
gatcattagtgtctgacttttttgtgttctttgtaaattccgtatattat
tccttcatccgatgtaagattggagaaaatcctttgccaatctgtaggct
actgatttatcccattcacagtgtctgttgcttcatagaatttttgcagt
ttcatgaggtcgcatttatcaattgttagtcatagagcctgagacactga
cattctgttcaagaaattgtctcctgcaccctatgcattaaaaaatattt
tccactttctcttctttgaaatttatcaggttttctgctgaggtccttga
tctacttggacttggagttttgtgcagggtaataattatggatctgcttt
cattcatctacacttagatatctagttaatccaccaccatttgttgaaga
ttctttcatttttccattctatagtcttggctaatttatcaaaaattaag
tttccaaagctatgtcgttttatttgtgggtctttgatccaaaacaactg
atcaatgtgtctatttccataccaatacagtacagtttttatcactattg
ctctgtagtacagcttgaggtaaggaatggtgattcctcatggagttgtt
ttattgttcgagatttttggctatcctgggtttcttgtttttccatatga
agatgagaatttctctttcaaaatctagaaaaaaaaagtgttggaatatt
gatatggtataaatttaatctgaagattactttcaataagacaggcattt
tcactattttaatcctgtcttgaaagttatttcagtcttctaatatcttc
ttcaatttctttcttcagtacttgaaattcttgttacacagatctttcac
ttgcttatagttattcgaagatacttataataatgtggctatgtaaacca
tgccacttccccatttctctgtttatcattgttaaaatgagaatattgat
tacatgtttattttatatgcagtcacttggctgcatgtattatcactgta
gagtaatctgcagatgttggggctcctatgcaactatcaatcattgcgaa
ttgtactgcatcgtcttccagttgcatccccggtaactccttgtagaccg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_77805392_77806495
seq2: B6Ng01-312N08.b_49_1154 (reverse)

seq1  TTTTA-TCTCTTACTATTAAT-AGGATGACTTTATGATTCATGACTTCAA  48
      ||||| ||||||||||| ||| ||||||||||||||| ||||||||||||
seq2  TTTTATTCTCTTACTATAAATAAGGATGACTTTATGA-TCATGACTTCAA  49

seq1  TGACACTGTTTTTAATACTGTTTCATGGAACTCTTGAAGTATACATCCAT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACTGTTTTTAATACTGTTTCATGGAACTCTTGAAGTATACATCCAT  99

seq1  TTTTAACTGCAATGGATTAATAGTATTGTTTTACACAATTAATAGCATTC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTGCAATGGATTAATAGTATTGTTTTACACAATTAATAGCATTC  149

seq1  TGTATAACT-AATTTTCTAGAACTACTTGGTTTCAAACTTTGTATAGTTT  197
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAACTAAATTTTCTAGAACTACTTGGTTTCAAACTTTGTATAGTTT  199

seq1  CAAATTGTGGTCAATCAGTTATTTTTACACATCCTGTTTTGGTATATTTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGTGGTCAATCAGTTATTTTTACACATCCTGTTTTGGTATATTTT  249

seq1  TAAGTGTGTGCCTACTGCCAGTTATTTCATTTATTTTTCATGGGAATACT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTGTGCCTACTGCCAGTTATTTCATTTATTTTTCATGGGAATACT  299

seq1  TTTGTATCACTTTTAAAATATGGTTTCAGTGAGGTGATGTGGTATGAAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATCACTTTTAAAATATGGTTTCAGTGAGGTGATGTGGTATGAAAA  349

seq1  CACATTAGTGATCATGCCTGTGGATCAGGGGGCCACAACATGAGAAGAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAGTGATCATGCCTGTGGATCAGGGGGCCACAACATGAGAAGAGA  399

seq1  AAACCAATTTCCACAAGGTATAGTCTGACCACCACACATCCATAAACACA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAATTTCCACAAGGTATAGTCTGACCACCACACATCCATAAACACA  449

seq1  CAAAATAAAGACATGTAATTTAGAAATGTTAAAGATGTTTTTAGGTCTTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAAGACATGTAATTTAGAAATGTTAAAGATGTTTTTAGGTCTTG  499

seq1  AGAGGTGGTTATACATCAGTGGGTAAGGTGATTTCAGTGCAACCATGAGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGGTTATACATCAGTGGGTAAGGTGATTTCAGTGCAACCATGAGG  549

seq1  ACCTCAGTTCAGTCCATTGCCTTATCATTCCAGTAGAGTCAGTCTCTAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGTTCAGTCCATTGCCTTATCATTCCAGTAGAGTCAGTCTCTAAA  599

seq1  GATGTGAGTCACCACCTCTCATGGAGACATATATCAAAAATCTGTCACAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAGTCACCACCTCTCATGGAGACATATATCAAAAATCTGTCACAT  649

seq1  AAGTGTTCTCATTACAATTCATTATAGTAGCAAAATTACAGTTACAGTTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTCTCATTACAATTCATTATAGTAGCAAAATTACAGTTACAGTTG  699

seq1  CCACAACACAAGGAACAGTATTAAAGGGGTGCAGCATTAGTAAAGTTGAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACACAAGGAACAGTATTAAAGGGGTGCAGCATTAGTAAAGTTGAG  749

seq1  AACTACTGCTCTAGAGTTATTCAAAATTCTTACTTTACTAAAGAGTATAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTGCTCTAGAGTTATTCAAAATTCTTACTTTACTAAAGAGTATAT  799

seq1  CAAAAAAGTGATCTAGATTTTTGTAAAACCCTAATGTTACATAAATGTGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAGTGATCTAGATTTTTGTAAAACCCTAATGTTACATAAATGTGT  849

seq1  TTTATTGTTGTTAAGCTATGCATTTGTTACTTACTACACTAACCAAAAGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTTGTTAAGCTATGCATTTGTTACTTACTACACTAACCAAAAGC  899

seq1  TACAAGGGACAAGAGCTGCTTTTACAGTACGATGCCACCCCTGGTGTTGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGGACAAGAGCTGCTTTTACAGTACGATGCCACCCCTGGTGTTGA  949

seq1  CTGTTAGGCACAAAATACATGAACTATTTCTCTCTCATGCCTGTTACCAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGGCACAAAATACATGAACTATTTCTCTCTCATGCCTGTTACCAA  999

seq1  TGAAATATGCAACATTGATTTCATTTACATGCTATTTTCTCCAGAAATAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATGCAACATTGATTTCATTTACATGCTATTTTCTCCAGAAATAA  1049

seq1  ATAGATAAATCAAATAATCGAATGTACCAATCCCTGTTGCGCAATAGCAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAAATCAAATAATCGAATGTACCAATCCCTGTTGCGCAATAGCAA  1099

seq1  AGAATTC  1104
      |||||||
seq2  AGAATTC  1106