BAC Information

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BAC

Clone NameB6Ng01-316A07
Chromosome17 (Build37)
Map Location 61,766,732 - 61,879,806
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC433129, EG620725
Downstream geneLOC100043560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316A07.bB6Ng01-316A07.g
ACCGA106518GA106519
length1,133914
definitionB6Ng01-316A07.b B6Ng01-316A07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,878,663 - 61,879,806)(61,766,732 - 61,767,644)
sequence
gaattccaggacagccccagttatgcagagaaaccctgtctcaaaaaaac
caaaaaacccaaaaaaaccaaaaaaaccccaaaccaaaccaaccaaccaa
acaaaaaacaaccaactaaacaaagaaaaacctcaaacccccaaacaaac
aaacaaaaacaaaactgcataaatatgaatggataaaccttcaactcaac
atcaatatgtaaatcacaattttttcattttaatggtacatgaatatata
tgtgggtcaagtacgttttgaatgttttgaatatgttatcaaaatatgct
tcattagtattcatttaaaaacaacttaaaatgtgctcttgggtgttaat
ctgcatgtacatctttatatctacctgagggggcaaaagagggagtcaga
tctttttagatatggtgtacagatgcttgtgagatgttgagaatcaaata
tagtttctcagtaaggccagtctgtagttttaaacagtgaggcatctttt
catatctagttacatttttaatggaaactgatagtgataagtggatttca
aagatttatttaatgacattttatttctagctttgaattatatcattttt
aacgaagattaaggcatatgtactaaaaaaaaatctaatgattctccaaa
agaaattgtgcaacatagtcacaaaaatgttggaagaacaaattgcactc
actaacaaattattgttcagtatccctataagatgaaagaaaatccccat
ttccctgttgtatattcataaaaaaatagctttgatgacttacatcttga
ttaattagtatccaaatatcagactcttaaaattctcagtataaaaatga
tttaccaagttagagttgttactaaagacattaagtgtaaacatagatgt
tctgtatgccaattagtggtgcatcttaacatttacttaattatatgtct
taattatgcaatttcatatatggtacttacactaattaaatattgcacat
gtaactagatgtagctgatatgtaaaaaaaactcaaggtatttaacagta
aaaaaaatgactattcatttttattctttgctaaggtagctgtggcttta
ctttacttgatgtacagagcaatgcttcaatag

gaattccactggatatatcaactaggatccagtgaaggcacagtaactac
tctcagttgttcaacagcaaaggaactcgatttcatgacatttttgttga
ttctttgtatctttttatttttctcttatttcctcctttttttctcttta
acttacatttcatgggactgtgtgtgtgtgattgtgaattttggaaagag
agagacagagaactaaatttgacaggatgagggcaagaggtttgattaga
atatatgaaaatcaacaaatattaaaaataaaagcaaggagatattactg
atagcatatccaataaagaacccatacatcaagcatctcatttccatagt
cgaatgcaagaaatataaataatttattaaattattaacattagacttga
gccagaacaccatgtgaaaacactttcaaaattatctaataaataaataa
aaatgaaatccctaataatatattagtttgtgctcactacactgtcaaaa
catggaaagacagaatatagcaatattgatgagttatggacaatggaaac
tttaatcagtttttggtggcaatataagatagcacaatcatctttggaaa
ttatttgacatagtaatataatattagacatatatctaagttatgacctc
attcatagcatttattcatgaaatatgaaaacatatattcatagtgatgt
atagaatgcttgaagacactttacttatatgagccaatcattttaaagat
gattgtaataccactgaaaaatgaattaactatgatactgtcacataagt
acaacaatcatcaagtaaagaattcagaggagatgagagaaagagaggca
atgtgtgtgtgtgtgtgggggggtggaaataatcgtctctaccacagctt
aagtatacaaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_61878663_61879806
seq2: B6Ng01-316A07.b_48_1180 (reverse)

seq1  CTATTGAAAGGCATTGCTCTGTACATCAGGTAAAGTAAAGCCAACAGCTT  50
      ||||||||  |||||||||||||||||| ||||||||||||| ||||| |
seq2  CTATTGAA--GCATTGCTCTGTACATCAAGTAAAGTAAAGCC-ACAGC-T  46

seq1  ACCTTAAGCAAAGAATAAAAATGATTAGTCATTTTTTTTTACTGTTTAAA  100
      ||||| |||||||||||||||||| |||||| ||||||||||||||  ||
seq2  ACCTT-AGCAAAGAATAAAAATGAATAGTCA-TTTTTTTTACTGTT--AA  92

seq1  ATACCTTGAGTTTTTTTTAACATATCAGCTACATCTAGTTACATGTTGCA  150
      |||||||||||||||||| |||||||||||||||||||||||||| ||||
seq2  ATACCTTGAGTTTTTTTT-ACATATCAGCTACATCTAGTTACATG-TGCA  140

seq1  ATTATTTAATTAGTGTAAGTACCATATATGAAATTGCATAATTAAGACAT  200
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TATTTAATTAGTGTAAGTACCATATATGAAATTGCATAATTAAGACAT  189

seq1  ATAATTAAGTAAATGTTAAGATGCACCACTAATTGGCATACAGAACATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAAGTAAATGTTAAGATGCACCACTAATTGGCATACAGAACATCT  239

seq1  ATGTTTACACTTAATGTCTTTAGTAACAACTCTAACTTGGTAAATCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTACACTTAATGTCTTTAGTAACAACTCTAACTTGGTAAATCATTT  289

seq1  TTATACTGAGAATTTTAAGAGTCTGATATTTGGATACTAATTAATCAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTGAGAATTTTAAGAGTCTGATATTTGGATACTAATTAATCAAGA  339

seq1  TGTAAGTCATCAAAGCTATTTTTTTATGAATATACAACAGGGAAATGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTCATCAAAGCTATTTTTTTATGAATATACAACAGGGAAATGGGG  389

seq1  ATTTTCTTTCATCTTATAGGGATACTGAACAATAATTTGTTAGTGAGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTCATCTTATAGGGATACTGAACAATAATTTGTTAGTGAGTGC  439

seq1  AATTTGTTCTTCCAACATTTTTGTGACTATGTTGCACAATTTCTTTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTCTTCCAACATTTTTGTGACTATGTTGCACAATTTCTTTTGGA  489

seq1  GAATCATTAGATTTTTTTTTAGTACATATGCCTTAATCTTCGTTAAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATTAGATTTTTTTTTAGTACATATGCCTTAATCTTCGTTAAAAAT  539

seq1  GATATAATTCAAAGCTAGAAATAAAATGTCATTAAATAAATCTTTGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAATTCAAAGCTAGAAATAAAATGTCATTAAATAAATCTTTGAAAT  589

seq1  CCACTTATCACTATCAGTTTCCATTAAAAATGTAACTAGATATGAAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTATCACTATCAGTTTCCATTAAAAATGTAACTAGATATGAAAAGA  639

seq1  TGCCTCACTGTTTAAAACTACAGACTGGCCTTACTGAGAAACTATATTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCACTGTTTAAAACTACAGACTGGCCTTACTGAGAAACTATATTTG  689

seq1  ATTCTCAACATCTCACAAGCATCTGTACACCATATCTAAAAAGATCTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAACATCTCACAAGCATCTGTACACCATATCTAAAAAGATCTGAC  739

seq1  TCCCTCTTTTGCCCCCTCAGGTAGATATAAAGATGTACATGCAGATTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTTTTGCCCCCTCAGGTAGATATAAAGATGTACATGCAGATTAAC  789

seq1  ACCCAAGAGCACATTTTAAGTTGTTTTTAAATGAATACTAATGAAGCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGAGCACATTTTAAGTTGTTTTTAAATGAATACTAATGAAGCATA  839

seq1  TTTTGATAACATATTCAAAACATTCAAAACGTACTTGACCCACATATATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATAACATATTCAAAACATTCAAAACGTACTTGACCCACATATATA  889

seq1  TTCATGTACCATTAAAATGAAAAAATTGTGATTTACATATTGATGTTGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTACCATTAAAATGAAAAAATTGTGATTTACATATTGATGTTGAG  939

seq1  TTGAAGGTTTATCCATTCATATTTATGCAGTTTTGTTTTTGTTTGTTTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGTTTATCCATTCATATTTATGCAGTTTTGTTTTTGTTTGTTTGT  989

seq1  TTGGGGGTTTGAGGTTTTTCTTTGTTTAGTTGGTTGTTTTTTGTTTGGTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGTTTGAGGTTTTTCTTTGTTTAGTTGGTTGTTTTTTGTTTGGTT  1039

seq1  GGTTGGTTTGGTTTGGGGTTTTTTTGGTTTTTTTGGGTTTTTTGGTTTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTTTGGTTTGGGGTTTTTTTGGTTTTTTTGGGTTTTTTGGTTTTT  1089

seq1  TTGAGACAGGGTTTCTCTGCATAACTGGGGCTGTCCTGGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACAGGGTTTCTCTGCATAACTGGGGCTGTCCTGGAATTC  1133


seq1: chr17_61766732_61767644
seq2: B6Ng01-316A07.g_68_981

seq1  GAATTCCACTGGATATATCAACTAGGATCCAGTGAAGGCACAGTAACTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGGATATATCAACTAGGATCCAGTGAAGGCACAGTAACTAC  50

seq1  TCTCAGTTGTTCAACAGCAAAGGAACTCGATTTCATGACATTTTTGTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTTGTTCAACAGCAAAGGAACTCGATTTCATGACATTTTTGTTGA  100

seq1  TTCTTTGTATCTTTTTATTTTTCTCTTATTTCCTCCTTTTTTTCTCTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTATCTTTTTATTTTTCTCTTATTTCCTCCTTTTTTTCTCTTTA  150

seq1  ACTTACATTTCATGGGACTGTGTGTGTGTGATTGTGAATTTTGGAAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACATTTCATGGGACTGTGTGTGTGTGATTGTGAATTTTGGAAAGAG  200

seq1  AGAGACAGAGAACTAAATTTGACAGGATGAGGGCAAGAGGTTTGATTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGAGAACTAAATTTGACAGGATGAGGGCAAGAGGTTTGATTAGA  250

seq1  ATATATGAAAATCAACAAATATTAAAAATAAAAGCAAGGAGATATTACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGAAAATCAACAAATATTAAAAATAAAAGCAAGGAGATATTACTG  300

seq1  ATAGCATATCCAATAAAGAACCCATACATCAAGCATCTCATTTCCATAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATATCCAATAAAGAACCCATACATCAAGCATCTCATTTCCATAGT  350

seq1  CGAATGCAAGAAATATAAATAATTTATTAAATTATTAACATTAGACTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATGCAAGAAATATAAATAATTTATTAAATTATTAACATTAGACTTGA  400

seq1  GCCAGAACACCATGTGAAAACACTTTCAAAATTATCTAATAAATAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAACACCATGTGAAAACACTTTCAAAATTATCTAATAAATAAATAA  450

seq1  AAATGAAATCCCTAATAATATATTAGTTTGTGCTCACTACACTGTCAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAATCCCTAATAATATATTAGTTTGTGCTCACTACACTGTCAAAA  500

seq1  CATGGAAAGACAGAATATAGCAATATTGATGAGTTATGGACAATGGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAAGACAGAATATAGCAATATTGATGAGTTATGGACAATGGAAAC  550

seq1  TTTAATCAGTTTTTGGTGGCAATATAAGATAGCACAATCATCTTTGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCAGTTTTTGGTGGCAATATAAGATAGCACAATCATCTTTGGAAA  600

seq1  TTATTTGACATAGTAATATAATATTAGACATATATCTAAGTTATGACCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGACATAGTAATATAATATTAGACATATATCTAAGTTATGACCTC  650

seq1  ATTCATAGCATTTATTCATGAAATATGAAAACATATATTCATAGTGATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAGCATTTATTCATGAAATATGAAAACATATATTCATAGTGATGT  700

seq1  ATAGAATGCTTGAAGACACTTTACTTATATGAGCCAATCATTTTAAAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATGCTTGAAGACACTTTACTTATATGAGCCAATCATTTTAAAGAT  750

seq1  GATTGTAATACCACTGAAAAATGAATTAACTATGATACTGTCACATAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTAATACCACTGAAAAATGAATTAACTATGATACTGTCACATAAGT  800

seq1  ACAACAATCATCAAGTAAAGAATTCAGAGGAGATGAGAGAAAGAGAGGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAATCATCAAGTAAAGAATTCAGAGGAGATGAGAGAAAGAGAGGCA  850

seq1  ATGTGTGTGTGTGTGT-GGGGGGTGGAAATAATCGTCTCTACCACAGCTT  899
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGTGTGTGTGGGGGGGTGGAAATAATCGTCTCTACCACAGCTT  900

seq1  AAGTATACAAAAAG  913
      ||||||||||||||
seq2  AAGTATACAAAAAG  914


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