BAC Information

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BAC

Clone NameB6Ng01-316K17
Chromosome17 (Build37)
Map Location 83,192,702 - 83,193,381
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043707, LOC625467, LOC668836, EG433141, EG625514
Downstream geneLOC100043711, LOC100043900, AW548124, EG545226, Eml4, Cox7a2l, Kcng3, Mta3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316K17.bB6Ng01-316K17.g
ACCGA107008GA107009
length9951,169
definitionB6Ng01-316K17.b B6Ng01-316K17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcacatggaacttgtaaaatgtctattactgagagaattttct
gagaaattcagcataggcttactttgcagcaatacctactattgcattgt
gacataaattaaatcagaaatacttatgttacttatggtaaatgttgaaa
actgatcacctaaggattcattttaagacactgagacaaaaacaaaaaac
aaaaacaaagaaacaatgtaaacaaaatcaaggaaaaccaaaagataaga
ataagaactacccttctgcttggtccttactgctggggcagaaccctagt
tggtctgctcccctgaagactctatatcctgatccatcccagaggatcca
ctgcactcagagcagttgggaagaacaccccaatcccctcccagagtccc
tgagctgctgctggtagcctggtagacttgggacccatcacccaccaaaa
ccccactctcacaaataccactttcctgccttctattcctcccacccttc
ccaactggtccttgctactggggcagacccctggttggtctgctcccctg
aagactccatatcctcatacatcccagaggacccgctgcactcagagcag
gtggacccactacactcagagcagttgagaagttgaggacaaggaccctc
tgcactcagaacagttgaggatctgctgctctcagagaagttgaagatta
gtacagttggtcaacagtttgacttctttacggaagatccaacagtctga
aggcctcccaggagatctactgcagccagggcaacagatcggcagcttct
ctgcccctgtgaaaagcccccaaatagggaggtcctacaggtggtctgat
acagccagggccacaagcctaccaggagacctgaagcaacccagggacaa
aagaggcagactcagaacagtcacccagataaacaaacaccaggaatagg
cgaaaggcaagcacagaccataagatgccaaatttacatgtgcat
gaattcagctgagaaagaggctactgagtggcagcccccgtcctcagggt
gatcagctgatctgccgattctgggagcaggtgtcccctccatgcagagc
aagcgtccccaggtggggctgcagcttccttcctttctctccctgtgagc
ggctgaatgagtgacagcttagtttccccatgagtacaaatgccacttgt
gaccaattcggtcttccaggaagagacctcgagacctgcatggtaatcta
catcatgttcagctctttttgaaaaacatgagctgggcagtggtggccca
tgcctttaattccagcacttgggaggcagaggcaggtggatttctgagtt
cgaggccagcctggtctacagggtgagttccaggacagccagggctacac
agagaaaccctgtctcgaaaaccaaagcaaagcaaagcaaagcaaagcaa
agcaaagcaaagcaaagcaaaccaaaccaaaccaaaccaaaccaaaccaa
caaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaggcagac
gtgggaactgtccctttatgtgattcttgtcttgctcaaatcaattctgg
ggagtttcacaggatcctgggactctctaagaaggtcacttgtggaaatc
cctggagtttgttcttgggaagcctggatggtatcttcagagacaagaag
ggtctatttgccatataggatgaagaaacagacctcgaagtagaatcctt
cagtgccccagtactatcagtgtgaaccagagttctctgaaaaaataaaa
agaacacacctatattaaagattagaattcctgcaactgccatgagttgg
gatgttgcagatctaggacctaattatcctgattatctctagcccttcga
acaaccattcatggcccttctggggtgtccgatctaatgtccttgtaagt
atcagacgaagcatctgaatgtagtagaataagcggactgctgatgtcca
ttaacccaaaaggctaagaatgctgtagcagagagttctctgctgtgact
gcgtgttcccacccaaggtgtctggaaaatgcatggatccatgcctttcg
tggcctcggtacctataaaaactggaacggaactccttaacctggcttac
agggtcttgggtgcgacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_83192702_83193381
seq2: B6Ng01-316K17.b_50_729

seq1  GAATTCATCACATGGAACTTGTAAAATGTCTATTACTGAGAGAATTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCACATGGAACTTGTAAAATGTCTATTACTGAGAGAATTTTCT  50

seq1  GAGAAATTCAGCATAGGCTTACTTTGCAGCAATACCTACTATTGCATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATTCAGCATAGGCTTACTTTGCAGCAATACCTACTATTGCATTGT  100

seq1  GACATAAATTAAATCAGAAATACTTATGTTACTTATGGTAAATGTTGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAAATTAAATCAGAAATACTTATGTTACTTATGGTAAATGTTGAAA  150

seq1  ACTGATCACCTAAGGATTCATTTTAAGACACTGAGACAAAAACAAAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATCACCTAAGGATTCATTTTAAGACACTGAGACAAAAACAAAAAAC  200

seq1  AAAAACAAAGAAACAATGTAAACAAAATCAAGGAAAACCAAAAGATAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAGAAACAATGTAAACAAAATCAAGGAAAACCAAAAGATAAGA  250

seq1  ATAAGAACTACCCTTCTGCTTGGTCCTTACTGCTGGGGCAGAACCCTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAACTACCCTTCTGCTTGGTCCTTACTGCTGGGGCAGAACCCTAGT  300

seq1  TGGTCTGCTCCCCTGAAGACTCTATATCCTGATCCATCCCAGAGGATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGCTCCCCTGAAGACTCTATATCCTGATCCATCCCAGAGGATCCA  350

seq1  CTGCACTCAGAGCAGTTGGGAAGAACACCCCAATCCCCTCCCAGAGTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTCAGAGCAGTTGGGAAGAACACCCCAATCCCCTCCCAGAGTCCC  400

seq1  TGAGCTGCTGCTGGTAGCCTGGTAGACTTGGGACCCATCACCCACCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGCTGCTGGTAGCCTGGTAGACTTGGGACCCATCACCCACCAAAA  450

seq1  CCCCACTCTCACAAATACCACTTTCCTGCCTTCTATTCCTCCCACCCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTCTCACAAATACCACTTTCCTGCCTTCTATTCCTCCCACCCTTC  500

seq1  CCAACTGGTCCTTGCTACTGGGGCAGACCCCTGGTTGGTCTGCTCCCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGGTCCTTGCTACTGGGGCAGACCCCTGGTTGGTCTGCTCCCCTG  550

seq1  AAGACTCCATATCCTCATACATCCCAGAGGACCCGCTGCACTCAGAGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCCATATCCTCATACATCCCAGAGGACCCGCTGCACTCAGAGCAG  600

seq1  GTGGACCCACTACACTCAGAGCAGTTGAGAAGTTGAGGACAAGGACCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACCCACTACACTCAGAGCAGTTGAGAAGTTGAGGACAAGGACCCTC  650

seq1  TGCACTCAGAACAGTTGAGGATCTGCTGCT  680
      ||||||||||||||||||||||||||||||
seq2  TGCACTCAGAACAGTTGAGGATCTGCTGCT  680