BAC Information

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BAC

Clone NameB6Ng01-317M07
Chromosome17 (Build37)
Map Location 82,862,629 - 82,863,732
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc8a1, EG668832, LOC100043707, LOC625467, LOC668836, EG433141
Downstream geneEG625514, LOC100043711, LOC100043900, AW548124, EG545226, Eml4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317M07.bB6Ng01-317M07.g
ACCGA107831GA107832
length1,2131,099
definitionB6Ng01-317M07.b B6Ng01-317M07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtcgtttttgtcttt
gagcttgtttatataatggattacattgatggattttcttatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgtttgtt
taatgtgttcttggattcggttagcgagaattttattgaggattttcgca
tcgatattcataagagaaattggtctgaagttctctatctttgttgggtt
tttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttgg
gtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgga
attagatcttctttgaaggtctgatagaactctgcactaaagccgtctgg
tcttgggctttttttggctgggagactattaataactgcttctacttctt
taggggatatgggactgtttagatggtctacttgatcctgattcaacttt
ggtacctggtatccgtccagaaatttgtccattttgtccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cctcaggatctgttgttatgtctcccttttcatttctgattttgttgatt
aggattttgtccctgtgccctctagtgagtctagctaagggtttatctat
cttgttgattttctcaaagaaccaactcctctttggttaattctttgaat
agttcgtcttgtttccacttggttgatttcacccctgagtttgattattt
cctgctgtctactcctcttgggtgaatttgcttcctttttttctagagct
tctagatgtgttgtcaagctgctagtatgtgctctctcccgtttcttctt
ggaggcactcagagctatgagtttccctcttagaaatgctttcatgtggt
cccataggtttggttacgttgtggcttcattttcataactctaaaaggtc
tttaagtttctttctttaatcttctgaccagattcattgagaaagaggtg
tgttcaagtcatgtatgtggccttacatatagtgaatgagaatccaggtc
tagccatgtgctgataagatacatggcacatttccaaaattttgtaatct
cggtggagaccgt
gaattcaaataaaacttcattttttaatattatttctgtatttgacaaga
tttctaaatagaagagaaagatttttcattcagtgacttaatgagcagat
atgtaataggcatctgttattacctgattcttaagttaatgttggtaatg
gaattatggataacagcaaatagacacacaagagtggaaagctaataatc
taaaaatcaaatatcacttttgaaattgcaaccaagttcctatggattcc
ttgtaaaaggagaaatttaactcttcacttgatttatcaaaagggaaaaa
agataataaacactattcaaaagtatgaaggtgaaagacattataaattg
aaaaggaaacttattatgtccttaacaacttagataaaatggaaaaataa
cttacaaggtaatttgccaatcttccccatgatgaaatgtaaagcatgaa
taactttgaacccatataaatgttgtttgctaagtaattatccacagaca
acattagtgatttcgctgttcaattttataacagtgtaaagaaaaaaata
acagtaattttatttgaactcttgcagaaaacagaaaggtagaagaagct
caaacacatgtttaagtcagaatgacactgttgccaaaagtaaacaaaca
ctcataaagataataaaagaattagacgtaaatatacttattgatatact
tattgaataaagcaacgcagatcattgtcaaaccatcaaaacttaaaagt
tgcaattgattgagaggataaacaagcgatatttatttcatgtttattga
atttttaagaatcgagcagcggtcgccatcttggtccaggacccgccgaa
cttaggaaattagtctgaacaggtgagagggtgcgccagagaacctgaca
gcttctggaacaggcggaagcacagaggcgctggggcagcaccctgcgtg
ggccggggacagcccggccacctttcggaccagaggacaggtgcccaccc
ggctggggagcgctaagccacagcagcagcggtcgccatctgtctgggac
cgccggacttaggaaattagtctgacaggtgagagggtggcgccagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_82862629_82863732
seq2: B6Ng01-317M07.g_66_1164

seq1  GAATTCAAATAAAACTTCATTTTTTAATATTATTTCTGTATTTGACAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAAAACTTCATTTTTTAATATTATTTCTGTATTTGACAAGA  50

seq1  TTTCTAAATAGAAGAGAAAGATTTTTCATTCAGTGACTTAATGAGCAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAATAGAAGAGAAAGATTTTTCATTCAGTGACTTAATGAGCAGAT  100

seq1  ATGTAATAGGCATCTGTTATTACCTGATTCTTAAGTTAATGTTGGTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATAGGCATCTGTTATTACCTGATTCTTAAGTTAATGTTGGTAATG  150

seq1  GAATTATGGATAACAGCAAATAGACACACAAGAGTGGAAAGCTAATAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATGGATAACAGCAAATAGACACACAAGAGTGGAAAGCTAATAATC  200

seq1  TAAAAATCAAATATCACTTTTGAAATTGCAACCAAGTTCCTATGGATTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATCAAATATCACTTTTGAAATTGCAACCAAGTTCCTATGGATTCC  250

seq1  TTGTAAAAGGAGAAATTTAACTCTTCACTTGATTTATCAAAAGGGAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAAGGAGAAATTTAACTCTTCACTTGATTTATCAAAAGGGAAAAA  300

seq1  AGATAATAAACACTATTCAAAAGTATGAAGGTGAAAGACATTATAAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATAAACACTATTCAAAAGTATGAAGGTGAAAGACATTATAAATTG  350

seq1  AAAAGGAAACTTATTATGTCCTTAACAACTTAGATAAAATGGAAAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAACTTATTATGTCCTTAACAACTTAGATAAAATGGAAAAATAA  400

seq1  CTTACAAGGTAATTTGCCAATCTTCCCCATGATGAAATGTAAAGCATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAGGTAATTTGCCAATCTTCCCCATGATGAAATGTAAAGCATGAA  450

seq1  TAACTTTGAACCCATATAAATGTTGTTTGCTAAGTAATTATCCACAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTGAACCCATATAAATGTTGTTTGCTAAGTAATTATCCACAGACA  500

seq1  ACATTAGTGATTTCGCTGTTCAATTTTATAACAGTGTAAAGAAAAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGTGATTTCGCTGTTCAATTTTATAACAGTGTAAAGAAAAAAATA  550

seq1  ACAGTAATTTTATTTGAACTCTTGCAGAAAACAGAAAGGTAGAAGAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAATTTTATTTGAACTCTTGCAGAAAACAGAAAGGTAGAAGAAGCT  600

seq1  CAAACACATGTTTAAGTCAGAATGACACTGTTGCCAAAAGTAAACAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACATGTTTAAGTCAGAATGACACTGTTGCCAAAAGTAAACAAACA  650

seq1  CTCATAAAGATAATAAAAGAATTAGACGTAAATATACTTATTGATATACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAAAGATAATAAAAGAATTAGACGTAAATATACTTATTGATATACT  700

seq1  TATTGAATAAAGCAACGCAGATCATTGTCAAACCATCAAAACTTAAAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAATAAAGCAACGCAGATCATTGTCAAACCATCAAAACTTAAAAGT  750

seq1  TGCAATTGATTGAGAGGATAAACAAGCGATATTTATTTCAGGTTTATTGA  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGCAATTGATTGAGAGGATAAACAAGCGATATTTATTTCATGTTTATTGA  800

seq1  ATTTTTAAGAATCGAGCAGCGGTCGCCATCTTGGTCCAGGACCCGCCGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAGAATCGAGCAGCGGTCGCCATCTTGGTCCAGGACCCGCCGAA  850

seq1  CTTAGGAAATTAGTCTGAACAGGTGAGAGGGTGCGCCAGAGAACCTGACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGAAATTAGTCTGAACAGGTGAGAGGGTGCGCCAGAGAACCTGACA  900

seq1  GCTTCTGGAACAGGCGGAAGCACAGAGGCGCTGGGGCAGCACCCTGCGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGGAACAGGCGGAAGCACAGAGGCGCTGGGGCAGCACCCTGCGTG  950

seq1  GGCCGGGGACAG-CCGGCCACCTTCCGGACCAGAGGACAGGTGCCCACCC  999
      |||||||||||| ||||||||||| |||||||||||||||||||||||||
seq2  GGCCGGGGACAGCCCGGCCACCTTTCGGACCAGAGGACAGGTGCCCACCC  1000

seq1  GGCTGGGGAGGCGGCCTAAGCCACAGCAGCAGCGGTCGCCATCTTGGTCT  1049
      ||||||||| |||  |||||||||||||||||||||||||||||  ||||
seq2  GGCTGGGGA-GCG--CTAAGCCACAGCAGCAGCGGTCGCCATCT--GTCT  1045

seq1  GGGACCCGCCGAACTTAGGAAATTAGTCTGAACAGGTGAGAGGGT-GCGC  1098
      |||| |||||| |||||||||||||||||| |||||||||||||| ||||
seq2  GGGA-CCGCCGGACTTAGGAAATTAGTCTG-ACAGGTGAGAGGGTGGCGC  1093

seq1  CAGAGA  1104
      ||||||
seq2  CAGAGA  1099