BAC Information

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BAC

Clone NameB6Ng01-319J02
Chromosome17 (Build37)
Map Location 37,748,958 - 37,750,075
singlet/doubletsinglet
Overlap genenone
Upstream geneH2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115
Downstream geneOlfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-319J02.bB6Ng01-319J02.g
ACCGA109163GA109164
length1,128928
definitionB6Ng01-319J02.b B6Ng01-319J02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaccagtgtgaactccaaaagaagtcttccatctatacagaca
taaatcactgttaaataaagtagatagcttttgtttcatctgatacaact
attgtgtttgaaagtctcttgtctcctgctctgtgtacctcagttatagc
ttgaaacattttataatatcatcatactgtttgacttcttcaacacttaa
tctacataaaagaaataagagaaaaatcatagatcttccttacgtctctc
atagttttcaacttttcaaattctttgctttgatagtatttgtctttgag
attggtaaaatgataaacagatttataattattgtttataataaatttta
tattggttcatttaaattaacaattcattatgataaatcaaactagctca
tttaatattaatattttaatctgtcaaatcaaaccagtacactgggagtt
gagaaagccgaataatattgatcatccatgtaaatgaacagaaaacatgt
ttgggtccttgctaaaataagtgtcccttggtccacacagataatttcat
catcttgcagataagcatttaaatagaaaaatttaagtgctcagagctta
agtaacatcaagttataatttatacatatcaaaaaaaccacagggacagg
gtaataatcacattgaacatggctacttaggctgtctctaatattgatat
ctaagagctgttgaagaagtgctttaactgtttacagaagtgtcacatat
gcaagaatataacatgttaacttttcttattcagtagtcttctcacattg
tctcttattctgtttagatggattttaaaaccattgtttttgtttttgtt
tttcagtaaagtgcccttgcttccttgttataatgatagccttgcttttc
caaactaaagttgtatggttttgttagaccttccataaaatacttatctt
tcctctttcaagttccaggaactcactccagtatgacttgttatgaattt
gggctttccaagctgatcaatttctcattattttcttctgcatgactgca
gttcttttaatcatataaagtcttcttagagaataattttgggtcagctt
gttttctttgcagagaaggggtaagaac
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgccttt
gagtttgtttatataatggattacattgatggatttttgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgtttttggattcggttagcgagacttttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagttcgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaaccggtccg
gtcctggggttttatttgctgggagactattaatatctgcttctatttct
ttaggggatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcattttctgattttgttaa
ttaggattttgtccctgtgccctctagtgagtctagctaagggtttatct
atctttgttgattttctcaaagaaccaactcctcgtttggttaattcttt
gaattagttcttcttgtttccacttggttgatttcacccctgagttgatt
atttcctgccgtctactcctcttgggtgaatttgcttcctttttttctag
agctttagaatgtgttgtctacctgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37748958_37750075
seq2: B6Ng01-319J02.b_47_1174

seq1  GAATTCAAACCAGTGTGAACTCCAAAAGAAGTCTTCCATCTATACAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCAGTGTGAACTCCAAAAGAAGTCTTCCATCTATACAGACA  50

seq1  TAAATCACTGTTAAATAAAGTAGATAGCTTTTGTTTCATCTGATACAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCACTGTTAAATAAAGTAGATAGCTTTTGTTTCATCTGATACAACT  100

seq1  ATTGTGTTTGAAAGTCTCTTGTCTCCTGCTCTGTGTACCTCAGTTATAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTTTGAAAGTCTCTTGTCTCCTGCTCTGTGTACCTCAGTTATAGC  150

seq1  TTGAAACATTTTATAATATCATCATACTGTTTGACTTCTTCAACACTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACATTTTATAATATCATCATACTGTTTGACTTCTTCAACACTTAA  200

seq1  TCTACATAAAAGAAATAAGAGAAAAATCATAGATCTTCCTTACGTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATAAAAGAAATAAGAGAAAAATCATAGATCTTCCTTACGTCTCTC  250

seq1  ATAGTTTTCAACTTTTCAAATTCTTTGCTTTGATAGTATTTGTCTTTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTCAACTTTTCAAATTCTTTGCTTTGATAGTATTTGTCTTTGAG  300

seq1  ATTGGTAAAATGATAAACAGATTTATAATTATTGTTTATAATAAATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTAAAATGATAAACAGATTTATAATTATTGTTTATAATAAATTTTA  350

seq1  TATTGGTTCATTTAAATTAACAATTCATTATGATAAATCAAACTAGCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTTCATTTAAATTAACAATTCATTATGATAAATCAAACTAGCTCA  400

seq1  TTTAATATTAATATTTTAATCTGTCAAATCAAACCAGTACACTGGGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATTAATATTTTAATCTGTCAAATCAAACCAGTACACTGGGAGTT  450

seq1  GAGAAAGCCGAATAATATTGATCATCCATGTAAATGAACAGAAAACATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGCCGAATAATATTGATCATCCATGTAAATGAACAGAAAACATGT  500

seq1  TTGGGTCCTTGCTAAAATAAGTGTCCCTTGGTCCACACAGATAATTTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCCTTGCTAAAATAAGTGTCCCTTGGTCCACACAGATAATTTCAT  550

seq1  CATCTTGCAGATAAGCATTTAAATAGAAAAATTTAAGTGCTCAGAGCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGCAGATAAGCATTTAAATAGAAAAATTTAAGTGCTCAGAGCTTA  600

seq1  AGTAACATCAAGTTATAATTTATACATATCAAAAAAACCACAGGGACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACATCAAGTTATAATTTATACATATCAAAAAAACCACAGGGACAGG  650

seq1  GTAATAATCACATTGAACATGGCTACTTAGGCTGTCTCTAATATTGATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAATCACATTGAACATGGCTACTTAGGCTGTCTCTAATATTGATAT  700

seq1  CTAAGAGCTGTTGAAGAAGTGCTTTAACTGTTTACAGAAGTGTCACATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGCTGTTGAAGAAGTGCTTTAACTGTTTACAGAAGTGTCACATAT  750

seq1  GCAAGAATATAACATGTTAACTTTTCTTATTCAGTAGTCTTCTCACATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAATATAACATGTTAACTTTTCTTATTCAGTAGTCTTCTCACATTG  800

seq1  TCTCTTATTCTGTTTAGATGGATTTTAAAACCATTGTTTTTGTTTTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTATTCTGTTTAGATGGATTTTAAAACCATTGTTTTTGTTTTTGTT  850

seq1  TTTCAGTAAAGTGCCCTTGCTTCCTTGTTATAATGATAGCCTTGCTTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTAAAGTGCCCTTGCTTCCTTGTTATAATGATAGCCTTGCTTTTC  900

seq1  CAAACTAAAGTTGTATGGTTTTGTTAGACCTTCCATAAAATACTTATCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTAAAGTTGTATGGTTTTGTTAGACCTTCCATAAAATACTTATCTT  950

seq1  TCCTCTTTCAAGTTCCAGGAACTCACTCCAGTATGACTTGTTATGAATTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTCAAGTTCCAGGAACTCACTCCAGTATGACTTGTTATGAATTT  1000

seq1  -GGCTTTCCAAGCTGATCAATTTCTCAT--ATTTCTTCTGCATGACTGCA  1047
       |||||||||||||||||||||||||||   |||||||||||||||||||
seq2  GGGCTTTCCAAGCTGATCAATTTCTCATTATTTTCTTCTGCATGACTGCA  1050

seq1  GTCTTTTAAATCATATAAAGTCT--CTAGAGAATAATTTT-GGTCAGC-T  1093
      ||  ||| |||||||||||||||   |||||||||||||| ||||||| |
seq2  GTTCTTTTAATCATATAAAGTCTTCTTAGAGAATAATTTTGGGTCAGCTT  1100

seq1  GTTTTC-TTGCAGAGA--GGGGAAGAAC  1118
      |||||| |||||||||  ||| ||||||
seq2  GTTTTCTTTGCAGAGAAGGGGTAAGAAC  1128