BAC Information

Click to search

BAC

Clone NameB6Ng01-323K02
Chromosome17 (Build37)
Map Location 64,620,734 - 64,621,840
singlet/doubletsinglet
Overlap genenone
Upstream geneFbxl17, Ppia-ps17_1026.1, LOC638867, LOC668677, A930002H24Rik, Fert2, LOC669778
Downstream genePja2, LOC100043582, Man2a1, 4930583I09Rik, LOC100043871, E130009J12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323K02.bB6Ng01-323K02.g
ACCGA112159GA112160
length1,2161,093
definitionB6Ng01-323K02.b B6Ng01-323K02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgtgaagcacctgaagaaaat
gttcagcatccttaatcatcagggaaatgcaaatcaaagcaaccctgaga
ttccatctcacaccagtcagaatggctaagatcaaaaacgcaggtgacag
cagatgctggcgagaatgtggagaaagaggaacactccttcattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctc
agaaaattggacatagtactaccggaggatccagcaatacctttcctggg
catatatccagaagatgttccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgtccctcaacagaggaatggatacagaaactgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaatttctaggca
aatggatggatctggagggcatcatcctgagtgagataacccaatcacaa
aagaactcacacaatatgtagtcactgataagtggatattagcccagaaa
cttagaatacccaagatacaagatacaatctgcaaaacacatgaaactca
agaagaacaaagactaaaatgtggacactttgccccttcttagaattggg
aataaaacacccatggaagaaattacagagacaaagtttggagctgagat
aaaagaatggaccatctagagactgccatacccggggatccatcccacaa
tcagcctccaaacgctgacaacattgcataaaggaccataaagatcttgc
agaaaggaccaagatatagctgtctcttatgagactatgctggggcgtag
caaacacagaagtggatgctcacagtcagctattggatgcatcacagggc
ccccaatggaggagctagagacagtacccaaggagctaaaggggtcggca
accctatagtggaacacatatgactaacagtaacgctccccccccccaga
agctcatgtttctagctgcatattatattcagaaagatgggcctagtagt
catcatgccaaagagaagcccacagtctgccaacctttatatgccaagtt
acaggaatgcaggctagaatggcagtggcgggggcatattgtctatacgc
tatctgtatatcgctg
gaattcctggtgtgtccccactcccacccctttgagtcctgccattctca
gggctggttggcttgaaaagtcactttttacttccttgatgagggtgaag
ccagtgagaggtgctgggcctgatgaaaggctcccgttttcctacattct
ctgttgtttccatgcctggtaaccccctctgatgtcaaaccaacagcaga
aacttctgcttgtccagtctagaggccaggtagcaacccaggcacttaga
gagacagagaaagacagggctcctgacctcggggaattccctgggcctcc
agaatttcactcagcagaaactaggggctctaaatgatctcccaacaaca
gttgtgtattttacttggtctcaagacctgtttgtttgttttttaaagtc
aagaatttcactaatctttttaaaaaagtaagaatgtttctaaactctca
ggtgttccacaggtctttcttggttactgtttcttggggttggggagcaa
gatcatgaggctgtgataggtttgactgaaagaggagcctgtccctaagt
gaagtccctacctggttttagtgagccaagctctgccaaaatgaagctca
cagcccactaacacaaacttctttcactccctgagcccgtgagtaaacat
acttcctttttaaatctcatgttttcctttctaatcattcgaaatttctg
cccaggataaaatcatcacccagattctcacagaactcatgaataatatt
taaatccactctcctaagcagcagggcctcaatttaaatagtactctaaa
cgcaagcacaaatttattttcaaagctctgaaaataaatgatgaagcctc
ctacgaggttatcttttatgcagtagaggagaaatatctttgagggtcag
ttgctcaggctgccaagggagtcagcactaggaagccatggggaaggaca
tgtgctgtcattcacatgggatggtgcagttggtttgaggggccaggctg
ataagtcactctatgttgccgaggctagggccaataaagtcttcttcaga
ccatgaatccctcacccatagagcacttctactagatgcagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_64620734_64621840
seq2: B6Ng01-323K02.g_67_1159 (reverse)

seq1  TACTGCAATCTAGTAGAAGTGGCTTTCCTTAATGGGTGAGGGAATCAATG  50
      |||||| ||||||||||||||      ||  |||||||||||| || |||
seq2  TACTGC-ATCTAGTAGAAGTG------CTCTATGGGTGAGGGATTC-ATG  42

seq1  GTCTGAAGAAGGACTTTTATTGG-CCTAGCCTCGGCACAATAGAGTGACT  99
      |||||||||| ||| |||||||| |||||||||||||  |||||||||| 
seq2  GTCTGAAGAA-GAC-TTTATTGGCCCTAGCCTCGGCAACATAGAGTGAC-  89

seq1  TTATCAGCCTGGCCCCTCAAAACCAACTGCACCATCCCATTGTGAATGAC  149
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  TTATCAGCCTGGCCCCTC-AAACCAACTGCACCATCCCA-TGTGAATGAC  137

seq1  AGCACATGTCCTTCCCCATGGCTTCCTAGTGCCTGACTCCCTTGGCAGCC  199
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGCACATGTCCTTCCCCATGGCTTCCTAGTG-CTGACTCCCTTGGCAGCC  186

seq1  TGAGCAACCTGACCCTCAAAGATATTTCTCCTCTACTGCATAAAAGATAA  249
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAA-CTGACCCTCAAAGATATTTCTCCTCTACTGCATAAAAGATAA  235

seq1  CCTCGTAGGAGGCTTCATCATTTATTTTCAGAGCTTTGAAAATAAATTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTAGGAGGCTTCATCATTTATTTTCAGAGCTTTGAAAATAAATTTG  285

seq1  TGCTTGCGTTTAGAGTACTATTTAAATTGAGGCCCTGCTGCTTAGGAGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCGTTTAGAGTACTATTTAAATTGAGGCCCTGCTGCTTAGGAGAG  335

seq1  TGGATTTAAATATTATTCATGAGTTCTGTGAGAATCTGGGTGATGATTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTAAATATTATTCATGAGTTCTGTGAGAATCTGGGTGATGATTTT  385

seq1  ATCCTGGGCAGAAATTTCGAATGATTAGAAAGGAAAACATGAGATTTAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGGCAGAAATTTCGAATGATTAGAAAGGAAAACATGAGATTTAAA  435

seq1  AAGGAAGTATGTTTACTCACGGGCTCAGGGAGTGAAAGAAGTTTGTGTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGTATGTTTACTCACGGGCTCAGGGAGTGAAAGAAGTTTGTGTTA  485

seq1  GTGGGCTGTGAGCTTCATTTTGGCAGAGCTTGGCTCACTAAAACCAGGTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCTGTGAGCTTCATTTTGGCAGAGCTTGGCTCACTAAAACCAGGTA  535

seq1  GGGACTTCACTTAGGGACAGGCTCCTCTTTCAGTCAAACCTATCACAGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTCACTTAGGGACAGGCTCCTCTTTCAGTCAAACCTATCACAGCC  585

seq1  TCATGATCTTGCTCCCCAACCCCAAGAAACAGTAACCAAGAAAGACCTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATCTTGCTCCCCAACCCCAAGAAACAGTAACCAAGAAAGACCTGT  635

seq1  GGAACACCTGAGAGTTTAGAAACATTCTTACTTTTTTAAAAAGATTAGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACCTGAGAGTTTAGAAACATTCTTACTTTTTTAAAAAGATTAGTG  685

seq1  AAATTCTTGACTTTAAAAAACAAACAAACAGGTCTTGAGACCAAGTAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTTGACTTTAAAAAACAAACAAACAGGTCTTGAGACCAAGTAAAA  735

seq1  TACACAACTGTTGTTGGGAGATCATTTAGAGCCCCTAGTTTCTGCTGAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAACTGTTGTTGGGAGATCATTTAGAGCCCCTAGTTTCTGCTGAGT  785

seq1  GAAATTCTGGAGGCCCAGGGAATTCCCCGAGGTCAGGAGCCCTGTCTTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCTGGAGGCCCAGGGAATTCCCCGAGGTCAGGAGCCCTGTCTTTC  835

seq1  TCTGTCTCTCTAAGTGCCTGGGTTGCTACCTGGCCTCTAGACTGGACAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTCTAAGTGCCTGGGTTGCTACCTGGCCTCTAGACTGGACAAG  885

seq1  CAGAAGTTTCTGCTGTTGGTTTGACATCAGAGGGGGTTACCAGGCATGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTTCTGCTGTTGGTTTGACATCAGAGGGGGTTACCAGGCATGGA  935

seq1  AACAACAGAGAATGTAGGAAAACGGGAGCCTTTCATCAGGCCCAGCACCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAGAGAATGTAGGAAAACGGGAGCCTTTCATCAGGCCCAGCACCT  985

seq1  CTCACTGGCTTCACCCTCATCAAGGAAGTAAAAAGTGACTTTTCAAGCCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGGCTTCACCCTCATCAAGGAAGTAAAAAGTGACTTTTCAAGCCA  1035

seq1  ACCAGCCCTGAGAATGGCAGGACTCAAAGGGGTGGGAGTGGGGACACACC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCCCTGAGAATGGCAGGACTCAAAGGGGTGGGAGTGGGGACACACC  1085

seq1  AGGAATTC  1107
      ||||||||
seq2  AGGAATTC  1093