BAC Information

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BAC

Clone NameB6Ng01-324K19
Chromosome17 (Build37)
Map Location 83,408,260 - 83,409,441
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625467, LOC668836, EG433141, EG625514, LOC100043711
Downstream geneLOC100043900, AW548124, EG545226, Eml4, Cox7a2l, Kcng3, Mta3, Haao
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324K19.bB6Ng01-324K19.g
ACCGA112927GA112928
length1,1561,183
definitionB6Ng01-324K19.b B6Ng01-324K19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaataccgctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggtatcatcctgagtgaagtaacccaatcacaaag
gaactcgcacactatgtactcactgataagtggatattagtcaagaaact
taggatacccaagatataagatacaacttgccaaacgcatgaaattcaag
aagaacgaagaccaaagtgtggacactttgccccttcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatctagagactgccatatccatcccataattagcctccaa
acgatgacaccattgcatacactagcaagattttgctgaaaagacccaga
tatagctctctcttgtgagactatgcccggggcctagcaaacacagaagt
ggatgatcacagtcagctattggatgggtcacacggccccaatggagagc
tagagaaattacccaaggagctaagggaactgcaacctatagtgaacaca
atatgactaaccagtacccggagctcttgtctttagctgcatatgtatca
aagatggctagtcgcatcactgcaagagaggccattgactgccactttat
atgcctcagtacagggcacgcctagggcaaaaatgcaattgggttgctta
agtgat
gaattccaggacagccagggctacacagagaaaccctgtctcgatccccc
gcccccaaatcatccaactctgaaacctcaagccataagttgaaggactc
tgagatcgtttgatggaaatccattaaacctgatacagaattgaatccat
ctaatcctggaagggagctcctactaaaagacctgtgtggctgtaagcta
cagttactgtgggaaatgagacagtcacgatgaacagggaatcattttca
tatactttttgtattaaatacttgccttgctgctgtaacacctgcccaat
tgcttcttaaggaaggaatggtttctctggcttgcagtttgagcccagct
ggtcacaccgcatcagccttcaggaagcagagagtaaccgatgctatgat
ccactagctttctccgttatatgtagccaggaccccagactatgaagtgg
tcctgcacccatttagagggactttccccatatcagttagctttatctgg
ataatccctctcagacacacccagagatttgtttctatggtgaccccacc
aagttgacaatcaagataactatcacagtcatttaattttaagatctgct
tgtatatgatacttttactaagagacaggcaggtggtcagtgagtactga
gttaggtaatatttgcaacagatcaaagtggttcacacacaaggtaaaga
caattaacatttcccttaaaatttatcccctaaagcaactcattcaatag
caaacaaactagcctacattcaccatctatgaaagccacagtttgatatt
aatataaatactctctccctctcacccccttggtgaatgtgtacaaagca
tttgtatatgggtgcatcaaggccatacaaggatgttggacctccaggaa
ttgtaattacagacattttgtaggatacctgcctcgcaatgtgggttgtg
ggcctccaaactccattcccttatgattgcatggcagagctctcaaccgc
ctgactcatttcctcaggccaactttgatcgctaatctgcacaatatgta
cgcaaggaggagaagactttcccaatgttatagctgaagaacatacagct
gttcattagtgtttgatcacaagcataaatttaattgactctcagtcact
gacgcaatcttaagggacttgtcttaacgccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_83408260_83409441
seq2: B6Ng01-324K19.g_64_1246 (reverse)

seq1  CTGGCGTTA--ACAAACTCCTTAAGATTTGCGTCAGTGACTGGAGAGTTT  48
      |||||||||  ||||   |||||||| |||||||||||||| |||||  |
seq2  CTGGCGTTAAGACAAGTCCCTTAAGA-TTGCGTCAGTGACT-GAGAG--T  46

seq1  CAATT-AATTATTCCTGGTGATTCAAACACCTAATGGACAGCTGTATG-T  96
      ||||| ||||  | || |||| ||||||| |||||| ||||||||||| |
seq2  CAATTAAATTTATGCTTGTGA-TCAAACA-CTAATGAACAGCTGTATGTT  94

seq1  CTTCAGCTATAACAT--GGGAAGTCTTCTCCTCCTTGCGTACATATTGTG  144
      |||||||||||||||  || ||||||||||||||||||||||||||||||
seq2  CTTCAGCTATAACATTGGGAAAGTCTTCTCCTCCTTGCGTACATATTGTG  144

seq1  CAGATTAAGCGATCAAAGTTGGCCTGAGGAAATGAGTCA-GCGGTTGAGA  193
      |||||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGATT-AGCGATCAAAGTTGGCCTGAGGAAATGAGTCAGGCGGTTGAGA  193

seq1  GCTCTTGCCATGCAATCATAA-GGAATGGAGTTTGGA-GCCCACAACCCA  241
      |||| |||||||||||||||| ||||||||||||||| ||||||||||||
seq2  GCTC-TGCCATGCAATCATAAGGGAATGGAGTTTGGAGGCCCACAACCCA  242

seq1  CATTGCGAGGCAGGTATCCTACAAAATGTCTGTAATTACAATTCCTGGAG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCGAGGCAGGTATCCTACAAAATGTCTGTAATTACAATTCCTGGAG  292

seq1  GTCCAACATCCTTGTATGGCCTTGATGCACCCATATACAAATGCTTTGTA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAACATCCTTGTATGGCCTTGATGCACCCATATACAAATGCTTTGTA  342

seq1  CACATTCACCAAGGGGGTGAGAGGGAGAGAGTATTTATATTAATATCAAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCACCAAGGGGGTGAGAGGGAGAGAGTATTTATATTAATATCAAA  392

seq1  CTGTGGCTTTCATAGATGGTGAATGTAGGCTAGTTTGTTTGCTATTGAAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCTTTCATAGATGGTGAATGTAGGCTAGTTTGTTTGCTATTGAAT  442

seq1  GAGTTGCTTTAGGGGATAAATTTTAAGGGAAATGTTAATTGTCTTTACCT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGCTTTAGGGGATAAATTTTAAGGGAAATGTTAATTGTCTTTACCT  492

seq1  TGTGTGTGAACCACTTTGATCTGTTGCAAATATTACCTAACTCAGTACTC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGAACCACTTTGATCTGTTGCAAATATTACCTAACTCAGTACTC  542

seq1  ACTGACCACCTGCCTGTCTCTTAGTAAAAGTATCATATACAAGCAGATCT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCACCTGCCTGTCTCTTAGTAAAAGTATCATATACAAGCAGATCT  592

seq1  TAAAATTAAATGACTGTGATAGTTATCTTGATTGTCAACTTGGTGGGGTC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTAAATGACTGTGATAGTTATCTTGATTGTCAACTTGGTGGGGTC  642

seq1  ACCATAGAAACAAATCTCTGGGTGTGTCTGAGAGGGATTATCCAGATAAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGAAACAAATCTCTGGGTGTGTCTGAGAGGGATTATCCAGATAAA  692

seq1  GCTAACTGATATGGGGAAAGTCCCTCTAAATGGGTGCAGGACCACTTCAT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACTGATATGGGGAAAGTCCCTCTAAATGGGTGCAGGACCACTTCAT  742

seq1  AGTCTGGGGTCCTGGCTACATATAACGGAGAAAGCTAGTGGATCATAGCA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGGGTCCTGGCTACATATAACGGAGAAAGCTAGTGGATCATAGCA  792

seq1  TCGGTTACTCTCTGCTTCCTGAAGGCTGATGCGGTGTGACCAGCTGGGCT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTACTCTCTGCTTCCTGAAGGCTGATGCGGTGTGACCAGCTGGGCT  842

seq1  CAAACTGCAAGCCAGAGAAACCATTCCTTCCTTAAGAAGCAATTGGGCAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGCAAGCCAGAGAAACCATTCCTTCCTTAAGAAGCAATTGGGCAG  892

seq1  GTGTTACAGCAGCAAGGCAAGTATTTAATACAAAAAGTATATGAAAATGA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTACAGCAGCAAGGCAAGTATTTAATACAAAAAGTATATGAAAATGA  942

seq1  TTCCCTGTTCATCGTGACTGTCTCATTTCCCACAGTAACTGTAGCTTACA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGTTCATCGTGACTGTCTCATTTCCCACAGTAACTGTAGCTTACA  992

seq1  GCCACACAGGTCTTTTAGTAGGAGCTCCCTTCCAGGATTAGATGGATTCA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACAGGTCTTTTAGTAGGAGCTCCCTTCCAGGATTAGATGGATTCA  1042

seq1  ATTCTGTATCAGGTTTAATGGATTTCCATCAAACGATCTCAGAGTCCTTC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTATCAGGTTTAATGGATTTCCATCAAACGATCTCAGAGTCCTTC  1092

seq1  AACTTATGGCTTGAGGTTTCAGAGTTGGATGATTTGGGGGCGGGGGATCG  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATGGCTTGAGGTTTCAGAGTTGGATGATTTGGGGGCGGGGGATCG  1142

seq1  AGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAATTC  1182
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAATTC  1183