BAC Information

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BAC

Clone NameB6Ng01-326P07
Chromosome17 (Build37)
Map Location 56,703,386 - 56,894,840
singlet/doubletdoublet
Overlap geneSafb2, Safb, 2410015M20Rik, Rpl36, Lonp1, LOC619718, Tmem146, Ranbp3, Ccpn-ps, AI662250, Ndufa11, Fut4-ps1, Nrtn
Upstream geneLOC383258, Pot1b, Emr4, Zfp119, BC011426, EG433125, BC031441, Ebi3, Ccdc94, Shd, Fsd1, AW049765, Mpnd, Sh3gl1, Chaf1a, Ubxd1, Hdgfrp2, S3-12, 2310076L09Rik, Lrg1, Sema6b, Tnfaip8l1, D17Wsu104e, Dpp9, LOC668573, A230051N06Rik, Fem1a, Ticam1, M6prbp1, Arrdc5, Uhrf1, Jmjd2b, Ptprs, EG668592, Znrf4
Downstream geneDus3l, Gm546, Rfx2, Acsbg2, 1700061G19Rik, Mllt1, Asah3, Clpp, Alkbh7, Pspn, Gtf2f1, Khsrp, Slc25a41, Slc25a23, Crb3, Dennd1c, Tubb4, Tnfsf9, Cd70, Tnfsf14, C3, Gpr108, Trip10, LOC668635, Vav1, Emr1, EG224916
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326P07.bB6Ng01-326P07.g
ACCGA114628GA114629
length504551
definitionB6Ng01-326P07.b B6Ng01-326P07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,894,331 - 56,894,840)(56,703,386 - 56,703,942)
sequence
ctttaaaagttcaataagtaaacagaataagaagagaaagaaagtgccgg
gccgcctagactcccagctcccgtctggggaaactaaggcccagatgctc
tcccatctcccagctggggaaactgaggttcagataggctcccagttctc
gcctggagaaactgaggctcggagaacagacacctttatctaggacctga
gaccaaactttgaatttgggaaggaaggagaggacaggcaagtgccctcc
ctccccaccctgttactgccgcatccggcgcctgcctcagtttcccttcc
aagccagatggccaggactctagcgggtgactcttcccagccaccctcag
ggccccgcgccagcggctcagcccgcattagcctgatccggttatgcgtg
gggcctcctgctcacaaccagctgctgtgctgtgtgccctgccgcgcaaa
gtccacctttctggttctgcctgtcgcgggctggggagggggtgaaggga
acag
aacagtagataggagcacagcctccaaacacaccacagcatggaagggtc
tcaaggacacggtgttcattgagatcaagtgtatgtatgcatttcaccat
atatgcttgcaaagccatggtggtggatttgtgggtaaaagccctgggtg
ggtaaggggcaggctgctggtggtatgtgctttccaaaatgaaagcagta
taatccaggctggaattaggaactgacagcagacagtatgtaacagggaa
gcaggaaagtgcttgggaggctaaggcaggaggactgtgtggaaccccag
cctgtgttccacctcaaaccacctaaccacgagtgctcctactgcctgtc
aatgcattgacgggctcctactgcagtggagattcacaccctgttgccat
gcacagaacagggacaaggttcacacctgccatcatagtctctatggtgc
agccaaggatagcaggagctttcattgttccctctgagaacaccccagaa
acccatctcaggttcctcctatatagaatacttacctggggggagggggt
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_56894331_56894840
seq2: B6Ng01-326P07.b_52_561 (reverse)

seq1  CTGTTCCCTTCACCCCCTCCCCAGCCCGCGACAGGCAGAACCAGAAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCCTTCACCCCCTCCCCAGCCCGCGACAGGCAGAACCAGAAAGGT  50

seq1  GGACTTTGCGCGGCAGGGCACACAGCACAGCAGCTGGTTGTGAGCAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTGCGCGGCAGGGCACACAGCACAGCAGCTGGTTGTGAGCAGGAG  100

seq1  GCCCCACGCATAACCGGATCAGGCTAATGCGGGCTGAGCCGCTGGCGCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCACGCATAACCGGATCAGGCTAATGCGGGCTGAGCCGCTGGCGCGG  150

seq1  GGCCCTGAGGGTGGCTGGGAAGAGTCACCCGCTAGAGTCCTGGCCATCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGAGGGTGGCTGGGAAGAGTCACCCGCTAGAGTCCTGGCCATCTG  200

seq1  GCTTGGAAGGGAAACTGAGGCAGGCGCCGGATGCGGCAGTAACAGGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAAGGGAAACTGAGGCAGGCGCCGGATGCGGCAGTAACAGGGTGG  250

seq1  GGAGGGAGGGCACTTGCCTGTCCTCTCCTTCCTTCCCAAATTCAAAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGGGCACTTGCCTGTCCTCTCCTTCCTTCCCAAATTCAAAGTTT  300

seq1  GGTCTCAGGTCCTAGATAAAGGTGTCTGTTCTCCGAGCCTCAGTTTCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCAGGTCCTAGATAAAGGTGTCTGTTCTCCGAGCCTCAGTTTCTCC  350

seq1  AGGCGAGAACTGGGAGCCTATCTGAACCTCAGTTTCCCCAGCTGGGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGAGAACTGGGAGCCTATCTGAACCTCAGTTTCCCCAGCTGGGAGAT  400

seq1  GGGAGAGCATCTGGGCCTTAGTTTCCCCAGACGGGAGCTGGGAGTCTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGCATCTGGGCCTTAGTTTCCCCAGACGGGAGCTGGGAGTCTAGG  450

seq1  CGGCCCGGCACTTTCTTTCTCTTCTTATTCTGTTTACTTATTGAACTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCCGGCACTTTCTTTCTCTTCTTATTCTGTTTACTTATTGAACTTTT  500

seq1  AAAGGAATTC  510
      ||||||||||
seq2  AAAGGAATTC  510

seq1: chr17_56703386_56703942
seq2: B6Ng01-326P07.g_72_628

seq1  GAATTCAACAGTAGATAGGAGCACAGCCTCCAAACACACCACAGCATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAGTAGATAGGAGCACAGCCTCCAAACACACCACAGCATGGA  50

seq1  AGGGTCTCAAGGACACGGTGTTCATTGAGATCAAGTGTATGTATGCATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTCAAGGACACGGTGTTCATTGAGATCAAGTGTATGTATGCATTT  100

seq1  CACCATATATGCTTGCAAAGCCATGGTGGTGGATTTGTGGGTAAAAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATATATGCTTGCAAAGCCATGGTGGTGGATTTGTGGGTAAAAGCCC  150

seq1  TGGGTGGGTAAGGGGCAGGCTGCTGGTGGTATGTGCTTTCCAAAATGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGTAAGGGGCAGGCTGCTGGTGGTATGTGCTTTCCAAAATGAAA  200

seq1  GCAGTATAATCCAGGCTGGAATTAGGAACTGACAGCAGACAGTATGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATAATCCAGGCTGGAATTAGGAACTGACAGCAGACAGTATGTAAC  250

seq1  AGGGAAGCAGGAAAGTGCTTGGGAGGCTAAGGCAGGAGGACTGTGTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGCAGGAAAGTGCTTGGGAGGCTAAGGCAGGAGGACTGTGTGGAA  300

seq1  CCCCAGCCTGTGTTCCACCTCAAACCACCTAACCACGAGTGCTCCTACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCCTGTGTTCCACCTCAAACCACCTAACCACGAGTGCTCCTACTG  350

seq1  CCTGTCAATGCATTGACGGGCTCCTACTGCAGTGGAGATTCACACCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAATGCATTGACGGGCTCCTACTGCAGTGGAGATTCACACCCTGT  400

seq1  TGCCATGCACAGAACAGGGACAAGGTTCACACCTGCCATCATAGTCTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGCACAGAACAGGGACAAGGTTCACACCTGCCATCATAGTCTCTA  450

seq1  TGGTGCAGCCAAGGATAGCAGGAGCTTTCATTGTTCCCTCTGAGAACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCAGCCAAGGATAGCAGGAGCTTTCATTGTTCCCTCTGAGAACACC  500

seq1  CCAGAAACCCATCTCAGGTTCCTCCTATATAGAATACTTACCTGGGGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAACCCATCTCAGGTTCCTCCTATATAGAATACTTACCTGGGGGGA  550

seq1  GGGGGTA  557
      |||||||
seq2  GGGGGTA  557