BAC Information

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BAC

Clone NameB6Ng01-330B20
Chromosome17 (Build37)
Map Location 94,089,336 - 94,173,152
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668877, LOC100043746, LOC100043747, LOC100043748, LOC100043907, Adcyap1, LOC676157, LOC627503
Downstream geneLOC668885, LOC668886, Mettl4, 2700099C18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330B20.bB6Ng01-330B20.g
ACCGA116883GA116884
length1,1791,172
definitionB6Ng01-330B20.b B6Ng01-330B20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,171,955 - 94,173,152)(94,089,336 - 94,090,507)
sequence
gaattctctcaataacatgttcaattcattgttaccaatagctacaaaag
taagattatcagagtgaatatttatttgctttaatatgtatttgataaga
agaaaaggtacttttaagataagacacaacctagcaaagaagtaaaatag
aatgtgctacatattggtacaatacctataattattcgtaggttttgtgt
aaaaacagtttttttttgtcctacagaataatctactagactgaaattag
ttgtttctcaactgtacaataatctacaggttatcatacaactgcatcta
gtgtgaggcttttaatcaagactcgactcaacaatgtttctttcttataa
gcacacataatttgctacaatttcttcatggtcagtatatagagaccacc
ttctttacatttggccttattgtttactcatgtgcagcaagattgctgtc
tggagttatcagaatcttaatgtctttttagcatccacgatcactccttt
gtttttaagataacaaactcagcactttgcatttgtctgcacctaaagta
tctgcaaattcttgtgaatttcttcttcaggttcacgtaattccctccta
ttcttggacagctaaaatacctctcattaccatttatgagacaaaatctc
ataaataaatacaaaatatattttcttggaagaggctttatatttagttt
cacacatgaaaccaatcccttcttttactagtgtgcttggcatgagctat
tgtggctttcaagatataatcttgcctatataattagtttgtccagttat
atcctgtttaacaaaggagaacatgttcttacacaagctattcaaataat
acatgaagattaagataactatatgaaagtatttcttcttaaaagagaat
taaagagtcaatggaaactaggttctattaaattcattggttttaatttc
atgaagtctcaagtataatattggaaattgagagatatcttagaatgtgt
gtaataattaatcattgcaagatatgggtctaggatcctcaaaacatttt
ttgtcattaaattcactgtgataggtgagtgtccaagcatatgactgatg
catcagacattcttatggagatgttagatacctgtaacaagtcactcata
cttttcagggaacaagaaacagccctgtg

gaattctggcctgtttcctggctgctggatcaaaatgattctctcttgtg
tcttggggtagaccttcactgaggttatagctttcctggattggtagata
gaactgaatttctctacagaattgggatcttggtggtaaatctgaaagag
gtgaggttcatgtcaagtcataggtcacttggtccattctttcatttgtt
tatttttatattttttgtattttaatcaatgcataattgtttatggcatt
atcatgatcctcacatatagatgtgatgatattagcacatacattgccca
aacttttaagctatcttttttgttgttgtttttgtttttcgaaacagggt
ttctctgtatagccctggctgtcttggaactcacttcgtagaccaggctg
gcctcaaactcagaaatccgcctgcctctgcctcccaactgctgggatta
aaggcgtgtgccaccacacccagcaagctgtctttttttttttttttttt
tttttttaatttaaggtgagtcctagagactgaatacaggttcatgctag
gcaaacacttaccaatgggccacatccatggttttcttttaactaagtta
cctaggctggacttaatttcattctgtagttcaaatagccctagaatttt
tagtcttcctgttttgtgctattgaatacatgaaattataagtatgcttc
tctagttcaaactattccatgtctttgtgctataagcattcagaatcctt
ccttctagttttcttgaaataatacagtacaatattgttaattatagggg
tttgtactatactataaacatcagaatttattgttctagtaaatttctta
ctcattgattaatctttcctctaacctagacttcactctatggtaacctc
ctattatgttcttgattcttatgagaccaacattttgggtcttaccaatc
agtaaaaataataatatctgtcttttttcagttcaaaatatacctgccaa
ggtgacagtaaaggagcatagtattgggcataggacctcaccaggataga
gaataaggattaatgcatgcattattgccatttattgttttaccaaaaaa
ttagcctgtttttcacccaaataaagccgaagggccggcttattagtgct
ggggaaccgtggattttatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_94171955_94173152
seq2: B6Ng01-330B20.b_46_1224 (reverse)

seq1  CACA-GGCTGTTTCTTGTTCCCTGAAAAAGTATTGAGTGGACTTTGTACC  49
      |||| ||||||||||||||||||| ||||||| ||||| ||| ||||  |
seq2  CACAGGGCTGTTTCTTGTTCCCTG-AAAAGTA-TGAGT-GAC-TTGTTAC  46

seq1  AGGTAATCTAAACAATTCCTTCCCATAAGATGGTTCTTGGATGCCATTCA  99
      |||| ||||||      | |  ||||||||  | |||  |||||   |||
seq2  AGGT-ATCTAA------CATCTCCATAAGAATG-TCT--GATGC--ATCA  84

seq1  AGGTCAATATGCTTTGGACACTCACCTATCACCAAGTGAA-TTAATGAC-  147
        ||| |||||| |||||||||||||||||||  |||||| |||||||| 
seq2  --GTC-ATATGC-TTGGACACTCACCTATCAC--AGTGAATTTAATGACA  128

seq1  AAAAATGTTTTGAGGATCCTAGAACCATATCTTGCAATGATTAATTATTA  197
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAAAATGTTTTGAGGATCCTAGACCCATATCTTGCAATGATTAATTATTA  178

seq1  CACACATTCTAAGATATCTCTCAATTTCCAATATTATACTTGAGACTTCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATTCTAAGATATCTCTCAATTTCCAATATTATACTTGAGACTTCA  228

seq1  TGAAATTAAAACCAATGAATTTAATAGAACCTAGTTTCCATTGACTCTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTAAAACCAATGAATTTAATAGAACCTAGTTTCCATTGACTCTTT  278

seq1  AATTCTCTTTTAAGAAGAAATACTTTCATATAGTTATCTTAATCTTCATG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCTTTTAAGAAGAAATACTTTCATATAGTTATCTTAATCTTCATG  328

seq1  TATTATTTGAATAGCTTGTGTAAGAACATGTTCTCCTTTGTTAAACAGGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTGAATAGCTTGTGTAAGAACATGTTCTCCTTTGTTAAACAGGA  378

seq1  TATAACTGGACAAACTAATTATATAGGCAAGATTATATCTTGAAAGCCAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTGGACAAACTAATTATATAGGCAAGATTATATCTTGAAAGCCAC  428

seq1  AATAGCTCATGCCAAGCACACTAGTAAAAGAAGGGATTGGTTTCATGTGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTCATGCCAAGCACACTAGTAAAAGAAGGGATTGGTTTCATGTGT  478

seq1  GAAACTAAATATAAAGCCTCTTCCAAGAAAATATATTTTGTATTTATTTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAAATATAAAGCCTCTTCCAAGAAAATATATTTTGTATTTATTTA  528

seq1  TGAGATTTTGTCTCATAAATGGTAATGAGAGGTATTTTAGCTGTCCAAGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTTTGTCTCATAAATGGTAATGAGAGGTATTTTAGCTGTCCAAGA  578

seq1  ATAGGAGGGAATTACGTGAACCTGAAGAAGAAATTCACAAGAATTTGCAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGGGAATTACGTGAACCTGAAGAAGAAATTCACAAGAATTTGCAG  628

seq1  ATACTTTAGGTGCAGACAAATGCAAAGTGCTGAGTTTGTTATCTTAAAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTAGGTGCAGACAAATGCAAAGTGCTGAGTTTGTTATCTTAAAAA  678

seq1  CAAAGGAGTGATCGTGGATGCTAAAAAGACATTAAGATTCTGATAACTCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAGTGATCGTGGATGCTAAAAAGACATTAAGATTCTGATAACTCC  728

seq1  AGACAGCAATCTTGCTGCACATGAGTAAACAATAAGGCCAAATGTAAAGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCAATCTTGCTGCACATGAGTAAACAATAAGGCCAAATGTAAAGA  778

seq1  AGGTGGTCTCTATATACTGACCATGAAGAAATTGTAGCAAATTATGTGTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTCTCTATATACTGACCATGAAGAAATTGTAGCAAATTATGTGTG  828

seq1  CTTATAAGAAAGAAACATTGTTGAGTCGAGTCTTGATTAAAAGCCTCACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAGAAAGAAACATTGTTGAGTCGAGTCTTGATTAAAAGCCTCACA  878

seq1  CTAGATGCAGTTGTATGATAACCTGTAGATTATTGTACAGTTGAGAAACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATGCAGTTGTATGATAACCTGTAGATTATTGTACAGTTGAGAAACA  928

seq1  ACTAATTTCAGTCTAGTAGATTATTCTGTAGGACAAAAAAAAACTGTTTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTTCAGTCTAGTAGATTATTCTGTAGGACAAAAAAAAACTGTTTT  978

seq1  TACACAAAACCTACGAATAATTATAGGTATTGTACCAATATGTAGCACAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAAACCTACGAATAATTATAGGTATTGTACCAATATGTAGCACAT  1028

seq1  TCTATTTTACTTCTTTGCTAGGTTGTGTCTTATCTTAAAAGTACCTTTTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTACTTCTTTGCTAGGTTGTGTCTTATCTTAAAAGTACCTTTTC  1078

seq1  TTCTTATCAAATACATATTAAAGCAAATAAATATTCACTCTGATAATCTT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATCAAATACATATTAAAGCAAATAAATATTCACTCTGATAATCTT  1128

seq1  ACTTTTGTAGCTATTGGTAACAATGAATTGAACATGTTATTGAGAGAATT  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGTAGCTATTGGTAACAATGAATTGAACATGTTATTGAGAGAATT  1178

seq1  C  1198
      |
seq2  C  1179


seq1: chr17_94089336_94090507
seq2: B6Ng01-330B20.g_67_1238

seq1  GAATTCTGGCCTGTTTCCTGGCTGCTGGATCAAAATGATTCTCTCTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCCTGTTTCCTGGCTGCTGGATCAAAATGATTCTCTCTTGTG  50

seq1  TCTTGGGGTAGACCTTCACTGAGGTTATAGCTTTCCTGGATTGGTAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGGTAGACCTTCACTGAGGTTATAGCTTTCCTGGATTGGTAGATA  100

seq1  GAACTGAATTTCTCTACAGAATTGGGATCTTGGTGGTAAATCTGAAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAATTTCTCTACAGAATTGGGATCTTGGTGGTAAATCTGAAAGAG  150

seq1  GTGAGGTTCATGTCAAGTCATAGGTCACTTGGTCCATTCTTTCATTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTTCATGTCAAGTCATAGGTCACTTGGTCCATTCTTTCATTTGTT  200

seq1  TATTTTTATATTTTTTGTATTTTAATCAATGCATAATTGTTTATGGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTATATTTTTTGTATTTTAATCAATGCATAATTGTTTATGGCATT  250

seq1  ATCATGATCCTCACATATAGATGTGATGATATTAGCACATACATTGCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGATCCTCACATATAGATGTGATGATATTAGCACATACATTGCCCA  300

seq1  AACTTTTAAGCTATCTTTTTTGTTGTTGTTTTTGTTTTTCGAAACAGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTAAGCTATCTTTTTTGTTGTTGTTTTTGTTTTTCGAAACAGGGT  350

seq1  TTCTCTGTATAGCCCTGGCTGTCTTGGAACTCACTTCGTAGACCAGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTATAGCCCTGGCTGTCTTGGAACTCACTTCGTAGACCAGGCTG  400

seq1  GCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCAACTGCTGGGATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCAACTGCTGGGATTA  450

seq1  AAGGCGTGTGCCACCACACCCAGCAAGCTGTCTTTTTTTTTTTTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGTGTGCCACCACACCCAGCAAGCTGTCTTTTTTTTTTTTTTTTTT  500

seq1  TTTTTTTAATTTAAGGTGAGTCCTAGAGACTGAATACAGGTTCATGCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAATTTAAGGTGAGTCCTAGAGACTGAATACAGGTTCATGCTAG  550

seq1  GCAAACACTTACCAATGGGCCACATCCATGGTTTTCTTTTAACTAAGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACACTTACCAATGGGCCACATCCATGGTTTTCTTTTAACTAAGTTA  600

seq1  CCTAGGCTGGACTTAATTTCATTCTGTAGTTCAAATAGCCCTAGAATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGCTGGACTTAATTTCATTCTGTAGTTCAAATAGCCCTAGAATTTT  650

seq1  TAGTCTTCCTGTTTTGTGCTATTGAATACATGAAATTATAAGTATGCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTCCTGTTTTGTGCTATTGAATACATGAAATTATAAGTATGCTTC  700

seq1  TCTAGTTCAAACTATTCCATGTCTTTGTGCTATAAGCATTCAGAATCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTCAAACTATTCCATGTCTTTGTGCTATAAGCATTCAGAATCCTT  750

seq1  CCTTCTAGTTTTCTTGAAATAATACAGTACAATATTGTTAATTATA-GGG  799
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCTTCTAGTTTTCTTGAAATAATACAGTACAATATTGTTAATTATAGGGG  800

seq1  TTTGTACTATACTATAAACATCAGAATTTATTGTTCTAGTAAATTTCTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACTATACTATAAACATCAGAATTTATTGTTCTAGTAAATTTCTTA  850

seq1  CTCATTGATTAATCTTT-CTCTAACCTAGACTTCACTCTATGGTAA-CTC  897
      ||||||||||||||||| |||||||||||||||||||||||||||| |||
seq2  CTCATTGATTAATCTTTCCTCTAACCTAGACTTCACTCTATGGTAACCTC  900

seq1  CTATTATGTTCTTGATTCTTATGAGACCAACATTTTGGGTCTTACCAATC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATGTTCTTGATTCTTATGAGACCAACATTTTGGGTCTTACCAATC  950

seq1  AGT-AAAATAAT-ATATCTGTCTTTTTTTCAGTTCAAAATATA-CTG-CA  993
      ||| |||||||| ||||||||| |||||||||||||||||||| ||| ||
seq2  AGTAAAAATAATAATATCTGTC-TTTTTTCAGTTCAAAATATACCTGCCA  999

seq1  AAGTGACAGTAAAAGAGCATAGTATT-GGCATAAGAACATACACAAGATA  1042
      | ||||||||||| |||||||||||| |||||| || |  || || ||||
seq2  AGGTGACAGTAAAGGAGCATAGTATTGGGCATAGGACCTCAC-CAGGATA  1048

seq1  GAGAATACAGAATTAATGCATGCATTAATG-CATTTATTGTTTTTTAACA  1091
      ||||||| || |||||||||||||||| || |||||||||||||   | |
seq2  GAGAATA-AGGATTAATGCATGCATTATTGCCATTTATTGTTTTACCA-A  1096

seq1  AAAATTAG-CTGTTTTTCAACAAAAATAAAAACAGAAAGACAGTCTTTAT  1140
      |||||||| |||||||||| | |||   ||| | ||| | | | | ||||
seq2  AAAATTAGCCTGTTTTTCACCCAAA--TAAAGCCGAAGGGCCGGC-TTAT  1143

seq1  TTAAAGTGCTGGGGAAACTGTGTA-TTTATATA  1172
      |   |||||||||| ||| ||| | ||||||||
seq2  T---AGTGCTGGGG-AACCGTGGATTTTATATA  1172


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