MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-333A24
Chromosome	17 (Build37)
Map Location	43,995,242 - 44,117,575
singlet/doublet	doublet
Overlap gene	Dscr1l1
Upstream gene	Cd2ap, Tnfrsf21, LOC100043770, Gpr110, Gpr116, Mep1a, LOC100043332, Pla2g7, Tdrd6, Slc25a27, Cyp39a1
Downstream gene	Enpp5, Enpp4, Clic5, Runx2, Supt3h, 4930564C03Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cd2ap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12488 MGI:1330281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnfrsf21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94185 MGI:2151075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043770 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043770
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein

name	Gpr110 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77596 MGI:1924846
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr116 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224792 MGI:2182928
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mep1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17287 MGI:96963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043332 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Pla2g7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27226 MGI:1351327
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tdrd6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210510 MGI:2679727
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a27 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74011 MGI:1921261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp39a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56050 MGI:1927096
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dscr1l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53901 MGI:1858219
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Enpp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83965 MGI:1933830
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Enpp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224794 MGI:2682634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clic5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224796 MGI:1917912
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Runx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12393 MGI:99829
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Supt3h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109115 MGI:1923723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930564C03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75341 MGI:1922591
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Cd2ap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125987598 GeneID:12488 MGI:1330281
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD2-associated protein transcript_id : NM_009847.3

name	Tnfrsf21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365760 GeneID:94185 MGI:2151075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor necrosis factor receptor superfamily, member 21 transcript_id : NM_178589.3

name	LOC100043770 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268853 GeneID:100043770
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : hypothetical protein LOC100043770 transcript_id : XM_001481023.1

name	Gpr110 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527001 GeneID:77596 MGI:1924846
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 110 transcript_id : NM_133776.1

name	Gpr116 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487170 GeneID:224792 MGI:2182928
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 116 transcript_id : NM_001081178.1

name	Mep1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982198 GeneID:17287 MGI:96963
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : meprin 1 alpha transcript_id : NM_008585.2

name	LOC100043332 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268715 GeneID:100043332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to hCG2042411 transcript_id : XM_001479985.1

name	Pla2g7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801997 GeneID:27226 MGI:1351327
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) transcript_id : NM_013737.3

name	Tdrd6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38259207 GeneID:210510 MGI:2679727
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tudor domain containing 6 transcript_id : NM_198418.1

name	Slc25a27 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357157 GeneID:74011 MGI:1921261
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25, member 27 transcript_id : NM_028711.2

name	Cyp39a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369036 GeneID:56050 MGI:1927096
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 39, subfamily a, polypeptide 1 transcript_id : NM_018887.3

name	Dscr1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46560586 GeneID:53901 MGI:1858219
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region gene 1-like 1 transcript_id : NM_207649.1

name	Dscr1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46559378 GeneID:53901 MGI:1858219
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome critical region gene 1-like 1 transcript_id : NM_030598.2

name	Enpp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:14030778 GeneID:83965 MGI:1933830
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ectonucleotide pyrophosphatase/phosphodiesterase 5 transcript_id : NM_032003.1

name	Enpp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84872230 GeneID:224794 MGI:2682634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ectonucleotide pyrophosphatase/phosphodiesterase 4 transcript_id : NM_199016.2

name	Clic5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85662398 GeneID:224796 MGI:1917912
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chloride intracellular channel 5 transcript_id : NM_172621.2

name	Runx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909357 GeneID:12393 MGI:99829
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : runt related transcription factor 2 transcript_id : NM_009820.2

name	Supt3h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803014 GeneID:109115 MGI:1923723
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : suppressor of Ty 3 homolog (S. cerevisiae) transcript_id : NM_178652.2

name	4930564C03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401995 GeneID:75341 MGI:1922591
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 4930564C03 gene transcript_id : XM_484637.3

name	Cd2ap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125987599 GeneID:12488 MGI:1330281
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : SH3 domain-containing adaptor protein METS-1; mesenchyme-to-epithelium transition protein with SH3 domains 1; SH3 domain-containing adapter protein product : CD2-associated protein protein_id : NP_033977.3

name	Tnfrsf21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519885 CCDS:CCDS28794.1 GeneID:94185 MGI:2151075
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : Death receptor 6; TNFR-related death receptor-6 product : tumor necrosis factor receptor superfamily, member 21 protein_id : NP_848704.1

name	LOC100043770 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268854 GeneID:100043770
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481073.1

name	Gpr110 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527002 CCDS:CCDS28795.1 GeneID:77596 MGI:1924846
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : G-protein coupled receptor; internal gene name of KIRIN laboratory:M5 product : G protein-coupled receptor 110 protein_id : NP_598537.1

name	Gpr116 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487171 GeneID:224792 MGI:2182928
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007218 - neuropeptide signaling pathway [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 116 protein_id : NP_001074647.1

name	Mep1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982199 GeneID:17287 MGI:96963
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008533 - astacin activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004238 - meprin A activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : meprin A alpha-subunit; meprin alpha product : meprin 1 alpha protein_id : NP_032611.2

name	LOC100043332 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268716 GeneID:100043332
definition	codon_start : 1 product : similar to hCG2042411 protein_id : XP_001480035.1

name	Pla2g7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980752 CCDS:CCDS28796.1 GeneID:27226 MGI:1351327
definition	GO_component : GO:0008247 - 2-acetyl-1-alkylglycerophosphocholine esterase complex [Evidence IEA] GO_function : GO:0003847 - 1-alkyl-2-acetylglycerophosphocholine esterase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0006954 - inflammatory response [Evidence TAS]; GO:0016042 - lipid catabolism [Evidence IEA] codon_start : 1 note : phospholipase A2 group VII (platelet-activating factor acetylhydrolase, plasma); PAF acetylhydrolase product : phospholipase A2, group VII protein_id : NP_038765.2

name	Tdrd6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38259208 CCDS:CCDS28797.1 GeneID:210510 MGI:2679727
definition	GO_component : GO:0018994 - polar granule [Evidence IDA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : NY-CO-45-like; tudor repeat 2 protein product : tudor repeat 2 protein_id : NP_940810.1

name	Slc25a27 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312006 CCDS:CCDS28798.1 GeneID:74011 MGI:1921261
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006839 - mitochondrial transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 25, member 27 protein_id : NP_082987.1

name	Cyp39a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9256529 CCDS:CCDS28799.1 GeneID:56050 MGI:1927096
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence TAS] [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0008396 - oxysterol 7-alpha-hydroxylase activity [Evidence IDA]; GO:0008387 - steroid 7-alpha-hydroxylase activity [Evidence IDA] GO_process : GO:0006699 - bile acid biosynthesis [Evidence IDA] [Evidence TAS]; GO:0030573 - bile acid catabolism [Evidence IEA]; GO:0006707 - cholesterol catabolism [Evidence IDA]; GO:0007586 - digestion [Evidence TAS]; GO:0006118 - electron transport [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA] codon_start : 1 note : oxysterol 7alpha-hydroxylase; cytochrome P450, 39a1 (oxysterol 7alpha-hydroxylase); oxysterol 7-alpha-hydroxylase product : cytochrome P450, family 39, subfamily a, polypeptide 1 protein_id : NP_061375.1

name	Dscr1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46560587 CCDS:CCDS28800.1 GeneID:53901 MGI:1858219
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0019722 - calcium-mediated signaling [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; myocyte-enriched calcineurin interactin protein 2 product : Down syndrome critical region gene 1-like 1 isoform 1 protein_id : NP_997532.1

name	Dscr1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13447392 CCDS:CCDS28801.1 GeneID:53901 MGI:1858219
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0019722 - calcium-mediated signaling [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; myocyte-enriched calcineurin interactin protein 2 product : Down syndrome critical region gene 1-like 1 isoform 2 protein_id : NP_085101.1

name	Enpp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14030779 CCDS:CCDS28802.1 GeneID:83965 MGI:1933830
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004551 - nucleotide diphosphatase activity [Evidence ISS] GO_process : GO:0009166 - nucleotide catabolism [Evidence ISS] codon_start : 1 product : ectonucleotide pyrophosphatase/phosphodiesterase 5 protein_id : NP_114392.1

name	Enpp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872231 CCDS:CCDS28803.1 GeneID:224794 MGI:2682634
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0009117 - nucleotide metabolism [Evidence IEA] codon_start : 1 product : ectonucleotide pyrophosphatase/phosphodiesterase 4 protein_id : NP_950181.2

name	Clic5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369886 CCDS:CCDS28804.1 GeneID:224796 MGI:1917912
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence ISS]; GO:0005626 - insoluble fraction [Evidence ISS]; GO:0005902 - microvillus [Evidence ISS] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : chloride intracellular channel 5 protein_id : NP_766209.1

name	Runx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20806530 GeneID:12393 MGI:99829
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence TAS] GO_process : GO:0048469 - cell maturation [Evidence IMP] [Evidence IGI]; GO:0002062 - chondrocyte differentiation [Evidence IGI]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence IMP]; GO:0001649 - osteoblast differentiation [Evidence IGI] [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IGI]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI] [Evidence IDA]; GO:0040036 - regulation of fibroblast growth factor receptor signaling pathway [Evidence IMP]; GO:0042487 - regulation of odontogenesis (sensu Vertebrata) [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001501 - skeletal development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : AKV core binding factor; polyomavirus enhancer binding factor 2 (PEBP2); core binding factor alpha 1; testicular RUNX2 isoform; PEBP2 alpha A; SL3-3 enhancer factor 1; runt domain, alpha subunit 1 product : runt related transcription factor 2 protein_id : NP_033950.1

name	Supt3h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520009 GeneID:109115 MGI:1923723
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 product : suppressor of Ty 3 homolog protein_id : NP_848767.1

name	4930564C03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51770289 GeneID:75341 MGI:1922591
definition	codon_start : 1 product : hypothetical protein LOC75341 protein_id : XP_484637.1

clone name	MSMg01-406H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119F16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-147I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220P13
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-333A24.b	B6Ng01-333A24.g
ACC	GA118982	GA118983
length	1,111	919
definition	B6Ng01-333A24.b	B6Ng01-333A24.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(43,995,242 - 43,996,353)	(44,116,657 - 44,117,575)
sequence	gaattctaggtaaccaatgtcgacagaatgaaagtgaatccagcggatgt aacctttgcaaatctcctttggcacaggttgttacactaattattgctta gcccaaagtgtgagaatattctgatctattaatatgtaaaagtgtcacca ttaataaataatgcgttgggaagcgtgtttaattgtctaagagtttgccg ccaggaacagacccaatctgtggtgtgtcgagtttctcaagatgtgctgt agctcatactctgagactcctgacatctagatctgatggttgtgggcatt gaagcctccttgtgatctataggatacttaccttgcatggggccatccct gtgtcctataggatggctcctaccatccttgtcttccaggcccagatgcc acggtggcactgttttcacacaataaccaaaaactgtccacagacattgc cagagtctctagcctcatgggtaaataagagaagtattctgggtctttct ctctacctaatccaggactttactttattggctatgctattgaacttagg gatcgcagtatatgccccaagccaggttcagccacccaccatcaataagt caatttaaagattcatattaatagagaaaagcagaaaatggggattggtt cagtgtggctacattgagaagatggataaagagggtaagtgaaacctcta gtctgtctttgggtccctgaagtcaaattttaaatagaggttcaagaata tgtacacggagacagtctcaacaggtgtggtctcattgtctggacttgag ttgccacctgaaaggcagtcagagacagttagagctgtgtggagtcgcct tcctgaagacatatgttccctctgagtggcctcacgtccttcttctagct taaatatccagagaagttccgattttatttaaggaccactcttgcaacca tctgatagttagactgagagacatggatgttctattagaatgtctttatt tctgccatactgggttataattaggaatctcatctcaggggtggggaggt caccagagcatcactgaaacaattcatttataagtattaatgcagtaggt acatttgagag	gaattctcaggaagagataaatggaataaaaaacgctaacaataacatcc caatatccaatagctttcttgtacagttaagatatagttctccgatgagt cacccctgctaccagtgtctggttttagtagaggttacacagaatgcact caaagctgagccttgaagaagtctgatcatgttatacccagatacaccaa cagaagggcccttgaaaagctcttctccattcttcatcctcacagtgtag actcttctcatgttcttccttatccctgcgctctgttcagagcaactttg agataaaggctgtgtttctacagagcctcttcattatctttccagggtct gatcctgaactggtgtgtttctataggacagggccattcccaataccctg catcaggcacctggtggaacatcttttccaagaaaggctttcagcgtggc agattcttcagacactggtttactccatatgagctctgtcagggcagaga gaggagaagatgcagccatctgtcactgcatacagaataacgaaagaggc tccactcagccagggaagattaaagagcacagcttcctggacttggtgtg aggaatgggatctagacacttgcattctctcgacacctacagagggtaca gacatgccaaccaacccatagtctgggtccctgatgaggtaaggactcct gcagggtccggacagaactgaaagcaaagccatcaccaagaactatgact tccctcaagtcgaggcatagaatatgtgtatatgaatatatgtatatgaa tatatatgaacctatatatgaacatatatgaacatatagatgaatatata tgaatatgcatatgaatgtatatgaacctatatatgaatatatatgaact atatatggagtatatatga
quality values	Open. Hide. 49 54 28 25 58 42 49 42 62 25 62 62 62 62 47 31 62 54 47 47 62 54 62 62 47 62 62 44 43 59 38 34 44 59 46 46 62 56 59 62 59 59 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 54 49 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 59 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 43 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 49 40 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 58 58 54 58 58 54 58 54 58 54 58 58 41 41 58 58 54 54 58 58 43 54 54 58 58 58 54 49 51 58 58 50 58 58 43 47 58 44 47 58 58 47 58 58 51 58 58 58 54 51 51 51 58 54 54 58 58 50 47 38 58 51 53 58 53 54 46 58 54 58 58 58 58 53 58 58 58 58 51 50 58 50 58 58 58 44 49 58 58 58 58 39 39 51 58 46 41 53 53 39 52 53 58 53 58 49 44 51 40 43 27 53 54 51 54 50 58 54 52 41 26 58 58 49 39 58 58 51 54 58 27 58 49 32 52 58 53 58 51 49 50 39 25 33 44 50 50 53 53 47 42 53 54 42 49 54 54 40 30 54 50 42 40 51 29 47 52 51 51 32 41 40 37 54 39 52 54 36 31 22 36 35 53 53 40 51 35 52 45 40 40 33 29 52 54 12 24 37 42 54 51 41 44 40 44 37 51 35 31 22 23 37 45 35 42 53 40 32 45 36 32 28 53 40 53 51 36 46 34 45 45 43 31 46 42 41 31 41 41 42 52 32 28 34 35 33 35 24 47 41 41 30 31 30 34 40 32 30 42 51 42 32 46 24 31 29 28 31 31 32 46 32 32 26 31 30 32 32 39 36 51 25 33 31 43 31 36 31 38 28 31 26 31 31 32 27 18 26 7 18 41 27 31 30 38 24 30 26 26 43 31 33 42 30 23 28 41 29 31 30 29 34 37 22 22 24 32 17 25 22 25 29 31 25 27 27 36 31 39 27 29 31 31 31 36 26 31 31 31 26 47 33 25 23 31 25 26 31 26 39 20 33 32 22 31 30 18 22 10 31 11 44 43 17 19 26 44 31 13 15 5 10 34 16 12 19 38 38 33 25 31 30 30 21 14 15 13 19 29 23 29 31 31 24 32 18 23 22 21 23 32 25 32 32 31 19 32 21 19 13 15 32 20 26 4 12 30 12 15 26 16 27 20 33 24 19 32 16 18 21 12 25 22 48 30 10 14 48 28 32 32 33 11 15 21 29 20 16 8 10 29 18 24 15 13 11 7 18 16 20 13 19 11 22 14 20 20 24 21 19 17 15 16 24 8 22 34 38 24 20 32 34 34 18 7 4 16 4 7 9 11 21 10 6 11 3 9 18 26 15 13 15 14 13 22 33 20 19 7 18 13 13 11 6 18 28 20 16 21 11 17 7 7 16 10 17 6 13 6 9 14 10 6 3 5 11 16 7 10 14 5 18 25 16 15 14 5 10 4	Open. Hide. 62 49 51 59 62 62 62 59 44 43 49 28 34 32 49 34 54 39 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 59 59 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 54 62 62 62 62 62 54 54 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 59 62 59 62 62 62 62 62 62 62 62 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 56 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 42 54 52 62 54 44 52 45 58 58 52 52 54 58 52 54 58 58 58 58 52 54 41 54 49 58 58 58 58 58 58 54 52 54 52 52 58 53 52 58 58 58 58 58 52 58 58 58 45 53 58 49 58 58 42 58 58 42 38 58 58 58 41 39 52 54 52 51 51 48 46 58 58 58 58 49 50 58 54 50 51 49 49 52 53 49 50 50 45 58 58 54 58 50 53 45 29 58 58 50 50 51 46 53 51 52 53 53 51 58 41 46 49 44 37 33 49 50 49 49 50 53 53 53 53 53 53 58 58 50 41 41 50 46 50 51 39 39 51 58 32 51 25 49 49 41 58 41 32 49 40 51 52 54 52 41 21 54 54 33 40 51 49 54 33 34 37 41 54 45 39 53 53 53 53 53 40 42 40 53 53 38 40 44 30 53 35 52 47 46 29 31 53 48 40 35 36 32 47 35 30 28 38 45 26 40 32 53 34 31 51 45 33 34 31 32 25 38 27 22 34 31 39 51 45 31 31 31 51 45 51 36 31 31 28 43 31 42 43 45 31 45 30 31 46 38 31 31 31 42 31 36 36 41 31 38 42 42 31 43 42 46 37 31 43 42 31 39 27 37 31 41 36 32 25 31 26 39 29 39 31 36 41 33 31 25 18 41 31 31 29 35 29 32 30 26 30 25 27 31 31 31 31 31 37 37 30 38 25 30 37 34 33 33 31 34 32 27 34 31 35 18 20 26 15 24 26 26 30 28 24 24 31 33 19 32 25 23 28 21 19 32 21 34 19 28 17 19 28 20 11 17 4 12 30 7 6 4 4 12 10 29 10 11 24 31 16 20 14 17 10 21

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_43995242_43996353
seq2: B6Ng01-333A24.b_29_1139

seq1  GAATTCTAGGTAACCAATGTCGACAGAATGAAAGTGAATCCAGCGGATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGTAACCAATGTCGACAGAATGAAAGTGAATCCAGCGGATGT  50

seq1  AACCTTTGCAAATCTCCTTTGGCACAGGTTGTTACACTAATTATTGCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTGCAAATCTCCTTTGGCACAGGTTGTTACACTAATTATTGCTTA  100

seq1  GCCCAAAGTGTGAGAATATTCTGATCTATTAATATGTAAAAGTGTCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAAGTGTGAGAATATTCTGATCTATTAATATGTAAAAGTGTCACCA  150

seq1  TTAATAAATAATGCGTTGGGAAGCGTGTTTAATTGTCTAAGAGTTTGCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAATAATGCGTTGGGAAGCGTGTTTAATTGTCTAAGAGTTTGCCG  200

seq1  CCAGGAACAGACCCAATCTGTGGTGTGTCGAGTTTCTCAAGATGTGCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAACAGACCCAATCTGTGGTGTGTCGAGTTTCTCAAGATGTGCTGT  250

seq1  AGCTCATACTCTGAGACTCCTGACATCTAGATCTGATGGTTGTGGGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATACTCTGAGACTCCTGACATCTAGATCTGATGGTTGTGGGCATT  300

seq1  GAAGCCTCCTTGTGATCTATAGGATACTTACCTTGCATGGGGCCATCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTCCTTGTGATCTATAGGATACTTACCTTGCATGGGGCCATCCCT  350

seq1  GTGTCCTATAGGATGGCTCCTACCATCCTTGTCTTCCAGGCCCAGATGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTATAGGATGGCTCCTACCATCCTTGTCTTCCAGGCCCAGATGCC  400

seq1  ACGGTGGCACTGTTTTCACACAATAACCAAAAACTGTCCACAGACATTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTGGCACTGTTTTCACACAATAACCAAAAACTGTCCACAGACATTGC  450

seq1  CAGAGTCTCTAGCCTCATGGGTAAATAAGAGAAGTATTCTGGGTCTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCTCTAGCCTCATGGGTAAATAAGAGAAGTATTCTGGGTCTTTCT  500

seq1  CTCTACCTAATCCAGGACTTTACTTTATTGGCTATGCTATTGAACTTAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCTAATCCAGGACTTTACTTTATTGGCTATGCTATTGAACTTAGG  550

seq1  GATCGCAGTATATGCCCCAAGCCAGGTTCAGCCACCCACCATCAATAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGCAGTATATGCCCCAAGCCAGGTTCAGCCACCCACCATCAATAAGT  600

seq1  CAATTTAAAGATTCATATTAATAGAGAAAAGCAGAAAATGGGGATTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAAAGATTCATATTAATAGAGAAAAGCAGAAAATGGGGATTGGTT  650

seq1  CAGTGTGGCTACATTGAGAAGATGGATAAAGAGGGTAAGTGAAACCTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGGCTACATTGAGAAGATGGATAAAGAGGGTAAGTGAAACCTCTA  700

seq1  GTCTGTCTTTGGGTCCCTGAAGTCAAATTTTAAATAGAGGTTCAAGAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTTTGGGTCCCTGAAGTCAAATTTTAAATAGAGGTTCAAGAATA  750

seq1  TGTACACGGAGACAGTCTCAACAGGTGTGGTCTCATTGTCTGGACTTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACGGAGACAGTCTCAACAGGTGTGGTCTCATTGTCTGGACTTGAG  800

seq1  TTGCCACCTGAAAGGCAGTCAGAGACAGTTAGAGCTGTGTGGAGTCGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACCTGAAAGGCAGTCAGAGACAGTTAGAGCTGTGTGGAGTCGCCT  850

seq1  TCCTGAAGACATATGTTCCCTCTGAGTGGCCTCACGTCCTTCTTCTAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAGACATATGTTCCCTCTGAGTGGCCTCACGTCCTTCTTCTAGCT  900

seq1  TAAATATCCAGAGAAGTTCCGA-TTTATTTAAGGACCACTCTTGCAACCA  949
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TAAATATCCAGAGAAGTTCCGATTTTATTTAAGGACCACTCTTGCAACCA  950

seq1  TCTGATAGTTAGACTGAGAGACATGGATGTTCTATTAGAATGTCTTTATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATAGTTAGACTGAGAGACATGGATGTTCTATTAGAATGTCTTTATT  1000

seq1  TCTGCCATACT-GGTTATAATTAGGAATCTCATCTCAGGGGTGGGGAGGT  1048
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCATACTGGGTTATAATTAGGAATCTCATCTCAGGGGTGGGGAGGT  1050

seq1  CACCAGAAGCATCACTGAAACAATTCATTTATAAAGTATTAATGCAGTTA  1098
      |||||| ||||||||||||||||||||||||| |||||||||||||| ||
seq2  CACCAG-AGCATCACTGAAACAATTCATTTAT-AAGTATTAATGCAG-TA  1097

seq1  GGTACATTTGAGAG  1112
      ||||||||||||||
seq2  GGTACATTTGAGAG  1111

seq1: chr17_44116657_44117575
seq2: B6Ng01-333A24.g_69_987 (reverse)

seq1  TCATATATA-TTCATATATAGGTTCATATATATTCATATATAGGTTCATA  49
      ||||||||| | |||||||| |||||||||||||||||||||||||||||
seq2  TCATATATACTCCATATATA-GTTCATATATATTCATATATAGGTTCATA  49

seq1  TACATTCATATGCATATTCATATATATTCATCTATATGTTCATATATGTT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCATATGCATATTCATATATATTCATCTATATGTTCATATATGTT  99

seq1  CATATATAGGTTCATATATATTCATATACATATATTCATATACACATATT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATAGGTTCATATATATTCATATACATATATTCATATACACATATT  149

seq1  CTATGCCTCGACTTGAGGGAAGTCATAGTTCTTGGTGATGGCTTTGCTTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCTCGACTTGAGGGAAGTCATAGTTCTTGGTGATGGCTTTGCTTT  199

seq1  CAGTTCTGTCCGGACCCTGCAGGAGTCCTTACCTCATCAGGGACCCAGAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTGTCCGGACCCTGCAGGAGTCCTTACCTCATCAGGGACCCAGAC  249

seq1  TATGGGTTGGTTGGCATGTCTGTACCCTCTGTAGGTGTCGAGAGAATGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTTGGTTGGCATGTCTGTACCCTCTGTAGGTGTCGAGAGAATGCA  299

seq1  AGTGTCTAGATCCCATTCCTCACACCAAGTCCAGGAAGCTGTGCTCTTTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTAGATCCCATTCCTCACACCAAGTCCAGGAAGCTGTGCTCTTTA  349

seq1  ATCTTCCCTGGCTGAGTGGAGCCTCTTTCGTTATTCTGTATGCAGTGACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCCTGGCTGAGTGGAGCCTCTTTCGTTATTCTGTATGCAGTGACA  399

seq1  GATGGCTGCATCTTCTCCTCTCTCTGCCCTGACAGAGCTCATATGGAGTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTGCATCTTCTCCTCTCTCTGCCCTGACAGAGCTCATATGGAGTA  449

seq1  AACCAGTGTCTGAAGAATCTGCCACGCTGAAAGCCTTTCTTGGAAAAGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTGTCTGAAGAATCTGCCACGCTGAAAGCCTTTCTTGGAAAAGAT  499

seq1  GTTCCACCAGGTGCCTGATGCAGGGTATTGGGAATGGCCCTGTCCTATAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCACCAGGTGCCTGATGCAGGGTATTGGGAATGGCCCTGTCCTATAG  549

seq1  AAACACACCAGTTCAGGATCAGACCCTGGAAAGATAATGAAGAGGCTCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACACCAGTTCAGGATCAGACCCTGGAAAGATAATGAAGAGGCTCTG  599

seq1  TAGAAACACAGCCTTTATCTCAAAGTTGCTCTGAACAGAGCGCAGGGATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACACAGCCTTTATCTCAAAGTTGCTCTGAACAGAGCGCAGGGATA  649

seq1  AGGAAGAACATGAGAAGAGTCTACACTGTGAGGATGAAGAATGGAGAAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAACATGAGAAGAGTCTACACTGTGAGGATGAAGAATGGAGAAGA  699

seq1  GCTTTTCAAGGGCCCTTCTGTTGGTGTATCTGGGTATAACATGATCAGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCAAGGGCCCTTCTGTTGGTGTATCTGGGTATAACATGATCAGAC  749

seq1  TTCTTCAAGGCTCAGCTTTGAGTGCATTCTGTGTAACCTCTACTAAAACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAAGGCTCAGCTTTGAGTGCATTCTGTGTAACCTCTACTAAAACC  799

seq1  AGACACTGGTAGCAGGGGTGACTCATCGGAGAACTATATCTTAACTGTAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTGGTAGCAGGGGTGACTCATCGGAGAACTATATCTTAACTGTAC  849

seq1  AAGAAAGCTATTGGATATTGGGATGTTATTGTTAGCGTTTTTTATTCCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCTATTGGATATTGGGATGTTATTGTTAGCGTTTTTTATTCCAT  899

seq1  TTATCTCTTCCTGAGAATTC  919
      ||||||||||||||||||||
seq2  TTATCTCTTCCTGAGAATTC  919

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information