MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-335O06
Chromosome	17 (Build37)
Map Location	13,245,987 - 13,420,960
singlet/doublet	doublet
Overlap gene	Tcp10c, Ttll2, Unc93a, Smok2a
Upstream gene	Park2, Agpat4, Tdgf1-ps2, Map3k4, 4732491K20Rik, LOC625753, Plg, Slc22a3, LOC100041192, Slc22a2, Slc22a1, Igf2r, Air, EG635617, Mas1, Mrgprh, Pnldc1, Mrpl18, Tcp1, Acat3, Acat2, Wtap, Sod2, Gpr31c
Downstream gene	Smok2b, LOC667359, LOC100041352, LOC667372, LOC667384, Smok4a, Tcte2, Mllt4, LOC100041464, EG635895, EG664821, EG664831, 4930488N24Rik, Dact2, Smoc2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Park2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50873 MGI:1355296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Agpat4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68262 MGI:1915512
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tdgf1-ps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21669 MGI:107366
definition	gene_synonym : Tdgf3 note : teratocarcinoma-derived growth factor, pseudogene 2 pseudo : _no_value

name	Map3k4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26407 MGI:1346875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4732491K20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224523 MGI:3026975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs

name	LOC625753 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Plg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18815 MGI:97620
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc22a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20519 MGI:1333817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041192 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 ESTs, 1 Protein pseudo : _no_value

name	Slc22a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20518 MGI:1335072
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc22a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20517 MGI:108111
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Igf2r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16004 MGI:96435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Air (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104103 MGI:1353471
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG635617 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:635617 MGI:3645097
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins pseudo : _no_value

name	Mas1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17171 MGI:96918
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrgprh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80978 MGI:1934134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pnldc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240023 MGI:2685159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins

name	Mrpl18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67681 MGI:1914931
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21454 MGI:98535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acat3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224530 MGI:109182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acat2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110460 MGI:87871
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wtap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60532 MGI:1926395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sod2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20656 MGI:98352
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr31c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:436440 MGI:1354371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcp10c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21462 MGI:98543
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttll2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625850 MGI:3644030
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 23 Proteins

name	Unc93a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381058 MGI:1933250
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smok2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27263 MGI:1351487
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 99 Proteins

name	Smok2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236574 MGI:3037705
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 99 Proteins

name	LOC667359 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667359
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein pseudo : _no_value

name	LOC100041352 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041352
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 mRNAs, 70 ESTs, 11 Proteins

name	LOC667372 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins pseudo : _no_value

name	LOC667384 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667384
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 59 Proteins

name	Smok4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:272667 MGI:3036233
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 50 Proteins

name	Tcte2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21646 MGI:98641
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mllt4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17356 MGI:1314653
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 177 ESTs, 3 Proteins

name	LOC100041464 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1021 ESTs, 8 Proteins pseudo : _no_value

name	EG635895 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:635895 MGI:3643198
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 31 Proteins

name	EG664821 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664821 MGI:3646178
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 Proteins

name	EG664831 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664831 MGI:3643256
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 28 Proteins

name	4930488N24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75011 MGI:1922261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 Proteins

name	Dact2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240025 MGI:1920347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smoc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64074 MGI:1929881
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Park2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131140 GeneID:50873 MGI:1355296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : parkin transcript_id : NM_016694.3

name	Agpat4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802840 GeneID:68262 MGI:1915512
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) transcript_id : NM_026644.2

name	Map3k4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93102420 GeneID:26407 MGI:1346875
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase kinase kinase 4 transcript_id : NM_011948.2

name	4732491K20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401588 GeneID:224523 MGI:3026975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs product : RIKEN cDNA 4732491K20 gene transcript_id : XM_488795.3

name	Plg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982112 GeneID:18815 MGI:97620
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plasminogen transcript_id : NM_008877.2

name	Slc22a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892398 GeneID:20519 MGI:1333817
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 22 (organic cation transporter), member 3 transcript_id : NM_011395.2

name	Slc22a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130849 GeneID:20518 MGI:1335072
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 22 (organic cation transporter), member 2 transcript_id : NM_013667.2

name	Slc22a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370695 GeneID:20517 MGI:108111
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 22 (organic cation transporter), member 1 transcript_id : NM_009202.3

name	Igf2r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778977 GeneID:16004 MGI:96435
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor 2 receptor transcript_id : NM_010515.2

name	Mas1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371805 GeneID:17171 MGI:96918
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS1 oncogene transcript_id : NM_008552.3

name	Mrgprh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13507681 GeneID:80978 MGI:1934134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAS-related GPR, member H transcript_id : NM_030726.1

name	Pnldc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268416 GeneID:240023 MGI:2685159
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins product : poly(A)-specific ribonuclease (PARN)-like domain containing 1 transcript_id : XM_139740.8

name	Mrpl18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343757 GeneID:67681 MGI:1914931
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L18 transcript_id : NM_026310.2

name	Tcp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802409 GeneID:21454 MGI:98535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : t-complex protein 1 transcript_id : NM_013686.3

name	Acat3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112181180 GeneID:224530 MGI:109182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acetyl-Coenzyme A acetyltransferase 3 transcript_id : NM_153151.3

name	Acat2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347821 GeneID:110460 MGI:87871
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acetyl-Coenzyme A acetyltransferase 2 transcript_id : NM_009338.2

name	Wtap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33946270 GeneID:60532 MGI:1926395
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Wilms' tumour 1-associating protein transcript_id : NM_175394.1

name	Sod2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76253932 GeneID:20656 MGI:98352
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : superoxide dismutase 2, mitochondrial transcript_id : NM_013671.3

name	Gpr31c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:130505519 GeneID:436440 MGI:1354371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 31, D17Leh66c region transcript_id : NM_001013832.2

name	Tcp10c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:130497907 GeneID:21462 MGI:98543
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : t-complex protein 10c transcript_id : NM_009341.2

name	Ttll2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401591 GeneID:625850 MGI:3644030
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 23 Proteins product : tubulin tyrosine ligase-like family, member 2 transcript_id : XM_890411.2

name	Unc93a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40445394 GeneID:381058 MGI:1933250
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : unc-93 homolog A (C. elegans) transcript_id : NM_199252.1

name	Smok2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401593 GeneID:27263 MGI:1351487
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 99 Proteins product : sperm motility kinase 2A transcript_id : XM_990030.1

name	Smok2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268409 GeneID:236574 MGI:3037705
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 99 Proteins product : sperm motility kinase 2B transcript_id : XM_990063.2

name	LOC100041352 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268426 GeneID:100041352
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 64 ESTs, 5 Proteins product : similar to t-complex protein 10c, transcript variant 5 transcript_id : XM_001477351.1

name	LOC100041352 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268418 GeneID:100041352
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 50 ESTs, 5 Proteins product : similar to t-complex protein 10c, transcript variant 1 transcript_id : XM_001477276.1

name	LOC100041352 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268420 GeneID:100041352
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 46 ESTs, 2 Proteins product : similar to t-complex protein 10c, transcript variant 2 transcript_id : XM_001477299.1

name	LOC100041352 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268422 GeneID:100041352
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 47 ESTs, 1 Protein product : similar to t-complex protein 10c, transcript variant 3 transcript_id : XM_001477320.1

name	LOC100041352 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268424 GeneID:100041352
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 49 ESTs, 5 Proteins product : similar to t-complex protein 10c, transcript variant 4 transcript_id : XM_001477339.1

name	LOC667384 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268413 GeneID:667384
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 59 Proteins product : similar to Smok4a protein transcript_id : XM_001475874.1

name	Smok4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401599 GeneID:272667 MGI:3036233
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 50 Proteins product : sperm motility kinase 4A transcript_id : XM_990288.1

name	Tcte2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114687622 GeneID:21646 MGI:98641
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : t-complex-associated testis expressed 2 transcript_id : NM_022311.2

name	Mllt4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401629 GeneID:17356 MGI:1314653
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 167 ESTs, 2 Proteins product : myeloid/lymphoid or mixed lineage-leukemia translocation to 4 homolog (Drosophila), transcript variant 1 transcript_id : XM_890447.2

name	EG635895 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268490 GeneID:635895 MGI:3643198
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 31 Proteins product : predicted gene, EG635895 transcript_id : XM_972801.2

name	EG664821 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268469 GeneID:664821 MGI:3646178
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 Proteins product : predicted gene, EG664821 transcript_id : XM_972876.2

name	EG664831 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268491 GeneID:664831 MGI:3643256
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 28 Proteins product : predicted gene, EG664831 transcript_id : XM_972968.2

name	4930488N24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268493 GeneID:75011 MGI:1922261
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 26 Proteins product : RIKEN cDNA 4930488N24 gene transcript_id : XM_619430.4

name	Dact2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982103 GeneID:240025 MGI:1920347
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dapper homolog 2, antagonist of beta-catenin (xenopus) transcript_id : NM_172826.2

name	Smoc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11612492 GeneID:64074 MGI:1929881
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SPARC related modular calcium binding 2 transcript_id : NM_022315.1

name	Park2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710078 GeneID:50873 MGI:1355296
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0043005 - neuron projection [Evidence IDA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0042417 - dopamine metabolism [Evidence IMP]; GO:0051583 - dopamine uptake [Evidence IMP]; GO:0007612 - learning [Evidence IMP]; GO:0007626 - locomotory behavior [Evidence IMP]; GO:0042415 - norepinephrine metabolism [Evidence IMP]; GO:0019538 - protein metabolism [Evidence IMP]; GO:0006464 - protein modification [Evidence IEA]; GO:0046928 - regulation of neurotransmitter secretion [Evidence IMP]; GO:0050804 - regulation of synaptic transmission [Evidence IMP]; GO:0001964 - startle response [Evidence IMP]; GO:0001963 - synaptic transmission, dopaminergic [Evidence IMP]; GO:0035249 - synaptic transmission, glutamatergic [Evidence IMP] codon_start : 1 note : parkin protein; Partial coding sequence representing amino acids 206-243; Homologous to GI:7710078. Partial coding sequence amino acids 58-178 product : parkin protein_id : NP_057903.1

name	Agpat4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229064 CCDS:CCDS28389.1 GeneID:68262 MGI:1915512
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0008654 - phospholipid biosynthesis [Evidence IEA] codon_start : 1 note : lysophosphatidic acid acyltransferase-delta; 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, delta) product : 1-acylglycerol-3-phosphate O-acyltransferase 4 protein_id : NP_080920.2

name	Map3k4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:93102421 GeneID:26407 MGI:1346875
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : MEK kinase 4 product : mitogen activated protein kinase kinase kinase 4 protein_id : NP_036078.2

name	4732491K20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51769961 GeneID:224523 MGI:3026975
definition	codon_start : 1 product : hypothetical protein protein_id : XP_488795.1

name	Plg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982113 CCDS:CCDS28390.1 GeneID:18815 MGI:97620
definition	GO_component : GO:0005615 - extracellular space [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004283 - plasmin activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IDA]; GO:0007596 - blood coagulation [Evidence IEA]; GO:0042730 - fibrinolysis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IDA]; GO:0046716 - muscle maintenance [Evidence IMP]; GO:0045445 - myoblast differentiation [Evidence IMP]; GO:0016525 - negative regulation of angiogenesis [Evidence TAS]; GO:0043537 - negative regulation of blood vessel endothelial cell migration [Evidence ISS]; GO:0050874 - organismal physiological process [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0009888 - tissue development [Evidence IEA]; GO:0042246 - tissue regeneration [Evidence IMP] codon_start : 1 exception : mismatches in translation product : plasminogen protein_id : NP_032903.2

name	Slc22a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755538 CCDS:CCDS28391.1 GeneID:20519 MGI:1333817
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0015075 - ion transporter activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0015101 - organic cation transporter activity [Evidence ISS]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0015695 - organic cation transport [Evidence ISS]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : solute carrier family 22, member 3; organic cation transporter 3 product : solute carrier family 22 (organic cation transporter), member 3 protein_id : NP_035525.1

name	Slc22a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305499 CCDS:CCDS28392.1 GeneID:20518 MGI:1335072
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0015101 - organic cation transporter activity [Evidence ISS] [Evidence IDA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IDA]; GO:0015695 - organic cation transport [Evidence ISS]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : solute carrier family 22, member 2; organic cation transporter 2 product : solute carrier family 22 member 2 protein_id : NP_038695.1

name	Slc22a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982010 CCDS:CCDS28393.1 GeneID:20517 MGI:108111
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0015101 - organic cation transporter activity [Evidence IDA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IDA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : solute carrier family 22, member 1 product : solute carrier family 22 member 1 protein_id : NP_033228.2

name	Igf2r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778978 GeneID:16004 MGI:96435
definition	GO_component : GO:0005768 - endosome [Evidence ISS]; GO:0005764 - lysosome [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005641 - nuclear envelope lumen [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0030140 - trans-Golgi network transport vesicle [Evidence ISS] GO_function : GO:0005520 - insulin-like growth factor binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : IGF-II/CI-MPR; cation-independent MPR; cation-independent mannose 6-phosphate receptor; mannose-6-phosphate receptor, cation independent product : insulin-like growth factor 2 receptor protein_id : NP_034645.2

name	Mas1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543241 CCDS:CCDS28394.1 GeneID:17171 MGI:96918
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : MAS1 oncogene protein_id : NP_032578.2

name	Mrgprh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13507682 CCDS:CCDS28395.1 GeneID:80978 MGI:1934134
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : G-protein coupled receptor GPR90; G protein-coupled receptor 90 product : MAS-related GPR, member H protein_id : NP_109651.1

name	Pnldc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268417 GeneID:240023 MGI:2685159
definition	codon_start : 1 product : poly(A)-specific ribonuclease (PARN)-like domain containing 1 protein_id : XP_139740.6

name	Mrpl18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385808 CCDS:CCDS28396.1 GeneID:67681 MGI:1914931
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 product : mitochondrial ribosomal protein L18 protein_id : NP_080586.1

name	Tcp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625624 CCDS:CCDS28397.1 GeneID:21454 MGI:98535
definition	GO_component : GO:0005832 - chaperonin-containing T-complex [Evidence IDA]; GO:0005815 - microtubule organizing center [Evidence IDA]; GO:0005720 - nuclear heterochromatin [Evidence IDA]; GO:0000242 - pericentriolar material [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0044267 - cellular protein metabolism [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : snoRNA MBI-39; snoRNA MBI-125; t-complex polypeptide 1 product : t-complex protein 1 protein_id : NP_038714.2

name	Acat3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625948 CCDS:CCDS28398.1 GeneID:224530 MGI:109182
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : acetyl CoA transferase-like product : acetyl-Coenzyme A acetyltransferase 3 protein_id : NP_694791.2

name	Acat2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30348956 GeneID:110460 MGI:87871
definition	GO_function : GO:0003985 - acetyl-CoA C-acetyltransferase activity [Evidence IEA]; GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : t-complex protein 1, related sequence 1 product : acetyl-Coenzyme A acetyltransferase 2 protein_id : NP_033364.1

name	Wtap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33946271 GeneID:60532 MGI:1926395
definition	GO_component : GO:0005654 - nucleoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : Wilms' tumour 1-associating protein protein_id : NP_780603.1

name	Sod2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980762 CCDS:CCDS28399.1 GeneID:20656 MGI:98352
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0030145 - manganese ion binding [Evidence IEA]; GO:0008383 - manganese superoxide dismutase activity [Evidence IMP] [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA] GO_process : GO:0001315 - age-dependent response to reactive oxygen species [Evidence ISS]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0000303 - response to superoxide [Evidence ISS]; GO:0006801 - superoxide metabolism [Evidence ISS] [Evidence IMP] codon_start : 1 note : manganese SOD; manganese superoxide dismutase product : superoxide dismutase 2, mitochondrial protein_id : NP_038699.2

name	Gpr31c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:130505520 GeneID:436440 MGI:1354371
definition	codon_start : 1 product : G protein-coupled receptor 31, D17Leh66c region protein_id : NP_001013854.2

name	Tcp10c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:130497908 CCDS:CCDS28401.1 GeneID:21462 MGI:98543
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : t-complex protein 10c protein_id : NP_033367.2

name	Ttll2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94401592 GeneID:625850 MGI:3644030
definition	codon_start : 1 product : similar to RP3-366N23.3 protein_id : XP_895504.2

name	Unc93a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40445395 CCDS:CCDS28402.1 GeneID:381058 MGI:1933250
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : unc93 (C.elegans) homolog A product : unc-93 homolog A protein_id : NP_954860.1

name	Smok2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94401594 GeneID:27263 MGI:1351487
definition	codon_start : 1 product : sperm motility kinase 2 protein_id : XP_995124.1

name	Smok2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268410 GeneID:236574 MGI:3037705
definition	codon_start : 1 product : sperm motility kinase 2B protein_id : XP_995157.2

name	LOC100041352 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268419 GeneID:100041352
definition	codon_start : 1 product : similar to t-complex protein 10c isoform 1 protein_id : XP_001477326.1

name	LOC100041352 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268421 GeneID:100041352
definition	codon_start : 1 product : similar to t-complex protein 10c isoform 2 protein_id : XP_001477349.1

name	LOC100041352 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268425 GeneID:100041352
definition	codon_start : 1 product : similar to t-complex protein 10c isoform 4 protein_id : XP_001477389.1

name	LOC100041352 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268427 GeneID:100041352
definition	codon_start : 1 product : similar to t-complex protein 10c isoform 5 protein_id : XP_001477401.1

name	LOC100041352 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268423 GeneID:100041352
definition	codon_start : 1 product : similar to t-complex protein 10c isoform 3 protein_id : XP_001477370.1

name	LOC667384 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268414 GeneID:667384
definition	codon_start : 1 product : similar to Smok4a protein protein_id : XP_001475924.1

name	Smok4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94401600 GeneID:272667 MGI:3036233
definition	codon_start : 1 product : similar to Smok4a protein protein_id : XP_995382.1

name	Tcte2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114687623 GeneID:21646 MGI:98641
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : t-complex-associated testis expressed 2 protein_id : NP_071706.2

name	Mllt4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94401630 GeneID:17356 MGI:1314653
definition	codon_start : 1 product : myeloid/lymphoid or mixed lineage-leukemia translocation to 4 homolog isoform 1 protein_id : XP_895540.2

name	EG635895 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94401632 GeneID:635895 MGI:3643198
definition	codon_start : 1 product : similar to EG635895 protein protein_id : XP_977895.1

name	EG664821 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268470 GeneID:664821 MGI:3646178
definition	codon_start : 1 product : similar to EG635895 protein protein_id : XP_977970.2

name	EG664831 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268492 GeneID:664831 MGI:3643256
definition	codon_start : 1 product : similar to EG635895 protein protein_id : XP_978062.2

name	4930488N24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268494 GeneID:75011 MGI:1922261
definition	codon_start : 1 product : hypothetical protein LOC75011 protein_id : XP_619430.4

name	Dact2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982104 CCDS:CCDS28406.1 GeneID:240025 MGI:1920347
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : dapper 2 protein_id : NP_766414.2

name	Smoc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11612493 GeneID:64074 MGI:1929881
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : unclassified translation discrepancy product : secreted modular calcium-binding protein 2 protein_id : NP_071710.1

name	LOC625753 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625753
definition	number : 1 pseudo : _no_value

name	LOC100041192 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268415 GeneID:100041192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 ESTs, 1 Protein product : similar to NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3 pseudo : _no_value transcript_id : XR_033029.1

name	Air (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:84872146 GeneID:104103 MGI:1353471
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : antisense Igf2r RNA transcript_id : NR_002853.1

name	EG635617 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94401589 GeneID:635617 MGI:3645097
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 6 Proteins product : predicted gene, EG635617 pseudo : _no_value transcript_id : XR_002006.1

name	LOC667359 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268411 GeneID:667359
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein product : similar to G protein-coupled receptor 31, D17Leh66c region pseudo : _no_value transcript_id : XR_032451.1

name	LOC667372 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268412 GeneID:667372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to UNC-93A protein pseudo : _no_value transcript_id : XR_032456.1

name	LOC100041464 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268487 GeneID:100041464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 1021 ESTs, 8 Proteins product : similar to ribosomal protein L21 pseudo : _no_value transcript_id : XR_033253.1

clone name	MSMg01-069I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532D12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-196F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132I22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-374H05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-461I15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-472I23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-312E18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-482J10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-423K21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-110K03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-306M03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-132I22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-351J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312E18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-499L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345P17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-502E01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-265M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307F21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-267E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370N19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-274P22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-484D06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-260N15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-378N19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-500C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531H11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-158D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340D05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-335O06.b	B6Ng01-335O06.g
ACC	GA120978	GA120979
length	1,140	1,164
definition	B6Ng01-335O06.b	B6Ng01-335O06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(13,245,987 - 13,247,176)	(13,419,804 - 13,420,960)
sequence	gaattcttcattttaatttaattccttttaatcatgcaaaggctgaagcc aatataatttaagtcttctgtctgggtccagggagaaagatcctctgatg ctcagaaggagggaagtgagggactaacatttacagaggaaggagctgga ccttaagactttggtcttgaccatctgtcttaggttggtgcattgtctat gcctgcacctttctggaattgtcagctgcagccagggctgtttacaagac acgtcctgcaatgtgctacccagagcccactgtgcccctgctcccaatgt gcactttcttgtgggcagaccctgccttggccgccaacacttgagctact actgtcctgcctgcagatgtgtcagccttcagcagcagctcttgttccat gtgctagggaccctctggagtgcagttttgagttcacatttctcaatgtc tcagttgtagaaatatttaatcctgacctggggtttctacctctccttag acaacttacttctagggtaaaacacacacacacacacacacacacatata cacacacacatacacacacacacatacacacacacacacacacacacaca cacacacacacacacacacacagagagcctttatatttacaataagcctt aaatagtacaaaagcttggcagctgtctatgttctatgctattagaatgt actttcctaccaataaccccaagttactagttactatgtttcatctgtgc tgctcttaatctaattggacagccctcagggccacgttctcttgagtcct aaaccatggtggcttcttcttcccttctcccttgtggtccctttccaatc cccatgtctgggaaacctaaactccacctctgtctcttctgcccaactat tgactttatttaccaatcagacatatcttgggggcccaaggttgttatgt gagggactctctcattctctgggaacaaccagggtcatggggggcccacc acttagcattacaatagaatagcaaaagaccaaaacctttaatatggtct ccctggcatttcaccatctgtttcacaactgcagaggccagttgttgttc tgagaggggcaatcaccaccctatcccttggtatctattc	gaattcacaggttgactgggcttgcctctgtgtaagtgggtcaagctgat ggtatctaatgttctctctggtccttctgatcatgctgctgggtccagaa gtacccaaagtccacacccagcttctacattcccccacttcaggtacctg aaagcttggtcccttcaaaggcacttttaatgatctggtggtttggggtg tgaagttattctacctggggcttttgaacaccacaggaacatttttccta tgtaaagaagaggcaggaaaacctccgaggtcatctttcacaaacatcta ttttattctcagagcaggagtctgattatgaccctgggtaggcagagggg cttttgtctctaccagctttggacaggctttcagcccctgctcggaatgg tgatcccggagaccatctgggatttcatcatttgctttcttccctctggc tggacccagaacatgatgcctttccacaaggttcccttttgcaggtccat gtctatacatgggtcctttccaatactataactgttgaatcatagcatcc ggcatcctctagtgatcttctaaaatgcaaaagcacatgtgagagggact ctgagaacctcagctgcacagggcatctctccagctggggttaccctgtt tcacactgctcccccaaattgcctcctcctgtctgaacctcttcccccca tctactatttcccaccaaataccaccctctcctccctcagcatctcctcc tcttccttctcctacttcctctccctagcatggtcagttctccttcttgt tcatcatgcaggatacgcacaggagatacctttctgggatgctagatatg ttggcaggttcaatttaaccatttatcccaaggtgtctagacctagcttc accatgcattgcaccatatacatatacatattcataagtataatctgcca gttgaccacagacatgagtaacatagatacattccaatacaaaaatgtac ctgtgccgaggccgaatgctcgttcctcctgacaccctttctgttgtctt aattttttggggggagacttctccctctggcccaggtgagatgttctcat ttggatgggatacagctacagagcttcctcatcgcatttcatctgctagt tcagcctgatgcct
quality values	Open. Hide. 58 33 35 26 58 58 62 62 31 31 62 62 62 47 50 62 62 62 47 62 62 62 62 62 62 62 49 62 47 56 62 54 47 59 62 62 59 62 59 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 59 59 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 59 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 54 62 62 59 56 62 62 62 59 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 59 59 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 51 59 62 49 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 54 62 56 62 62 49 54 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 58 58 58 58 58 58 58 58 54 58 58 58 54 58 54 58 54 58 54 58 58 58 54 58 54 58 58 58 54 58 54 58 54 58 54 58 54 58 54 54 54 58 54 58 54 58 54 58 54 58 54 58 54 58 54 58 54 58 58 58 58 58 52 54 53 54 52 52 52 58 54 58 54 58 58 58 58 58 58 58 58 58 58 58 58 51 50 54 48 51 53 58 58 58 52 58 51 54 53 58 54 58 53 51 58 53 51 50 46 49 41 49 41 48 51 50 54 58 43 53 53 32 58 51 47 42 42 50 51 51 49 49 48 58 54 52 32 53 53 50 46 58 54 54 50 52 58 49 39 25 46 53 42 49 51 51 49 58 50 52 49 53 53 58 52 50 50 50 58 49 49 40 42 41 53 31 47 50 34 49 50 42 40 53 58 53 58 54 39 41 35 40 27 58 37 35 44 49 54 38 34 19 54 31 54 51 37 45 40 53 37 33 38 35 33 40 47 49 51 53 38 39 32 37 49 53 50 50 30 51 52 42 49 42 39 37 51 32 29 33 33 54 39 39 33 19 20 44 51 51 31 40 36 44 33 31 45 31 23 7 42 35 24 41 40 45 18 30 54 40 52 40 46 40 38 41 24 42 30 28 20 46 51 18 12 34 31 27 46 47 31 51 40 31 33 34 37 21 39 40 31 35 18 47 17 27 22 45 32 34 40 38 27 31 42 25 18 46 25 32 51 37 33 46 26 20 41 26 33 31 51 45 40 34 27 21 29 30 29 30 38 40 32 32 51 42 25 40 32 31 41 38 29 18 16 25 21 32 36 31 41 30 33 29 31 31 32 22 29 26 28 36 31 46 30 15 18 21 43 22 35 31 31 34 22 31 48 26 22 29 48 31 21 21 31 18 32 27 27 32 12 39 23 31 43 31 38 16 9 20 30 41 39 41 32 9 31 13 44 9 6 16 8 5 6 9 6 7 18 25 20 17 8 6 41 14 21 20 32 32 37 25 12 31 27 21 7 9 29 25 26 32 44 25 22 16 14 8 15 9 19 14 15 38 18 33 33 31 28 37 44 44 31 34 26 23 48 33 8 6 17 15 18 19 20 32 24 32 32 28 34 15 25 16 33 13 29 13 19 31 13 34 31 17 30 43 34 28 15 29 13 15 17 33 43 8 24 22 12 31 13 37 14 28 27 13 10 12 18 28 28 7 40 14 13 12 10 19 11 11 17 9 9 10 9 18 5 5 7 7 13 13 21 9 14 20 4 3 10 8 10 11 9 9 5 10 7 5 21 14 11 18 15 6 7 5 5 11 10 13 24 19 10 5 3 8 13 23 25 17 8 7 6 23 15 8 11 8 6 6 25 7 4 5 15 8 27 17 5 5 11 6 2 5 6 7 5 7 1 7 4	Open. Hide. 62 49 51 44 62 47 42 62 44 59 62 59 56 49 31 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 47 47 62 62 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 52 62 62 62 62 62 62 58 54 58 58 58 58 58 58 58 58 49 54 54 58 54 58 58 58 58 58 58 58 58 58 58 58 54 54 39 58 52 54 54 49 58 58 58 58 58 58 58 58 58 52 58 58 58 58 58 58 58 58 58 58 58 41 53 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 58 52 58 54 58 58 52 58 52 58 58 58 40 58 52 50 53 58 58 58 58 53 58 53 51 58 46 39 58 58 58 58 53 53 58 58 58 52 58 52 51 58 58 58 50 58 53 53 51 58 58 58 58 58 52 54 31 58 58 45 32 58 58 58 50 58 34 58 50 35 58 54 53 36 42 51 58 52 50 40 52 37 37 49 49 37 50 41 58 51 58 51 52 51 50 52 50 51 51 39 25 31 50 49 39 50 58 54 50 54 26 58 51 42 46 50 50 51 49 58 52 53 52 58 58 58 50 37 58 54 50 51 51 40 54 49 42 52 53 32 52 50 51 41 50 49 50 58 26 52 39 53 53 53 52 39 58 58 58 58 50 37 53 53 39 40 45 42 52 31 54 51 35 54 40 37 35 47 23 54 41 39 40 51 39 39 41 54 49 51 53 53 39 44 34 32 38 39 46 39 40 32 34 34 43 43 40 35 54 37 33 51 35 53 37 46 40 53 32 54 38 42 39 53 29 37 38 31 23 37 46 42 45 41 31 54 54 33 52 27 33 35 33 42 47 23 40 40 25 28 38 35 31 43 41 33 31 40 29 32 39 15 31 33 32 39 40 34 31 37 31 28 24 11 34 24 37 34 35 35 31 32 32 26 34 39 18 39 19 24 16 33 16 46 13 31 14 33 46 32 28 17 43 34 33 25 19 31 26 25 31 32 25 31 42 51 31 31 31 46 16 38 43 30 31 20 47 30 34 32 37 31 19 19 47 8 16 31 36 46 31 13 22 33 34 17 42 33 43 33 34 33 34 19 33 31 36 25 38 32 38 38 20 17 48 32 31 36 33 24 21 21 24 21 35 27 30 23 34 35 31 18 27 18 26 19 6 8 35 22 38 32 24 33 19 24 30 24 48 19 30 31 28 22 33 21 30 22 31 19 31 29 18 17 34 30 11 6 6 6 11 7 8 12 9 17 28 38 44 27 32 33 15 9 7 7 5 7 25 16 17 24 20 25 32 9 9 30 25 11 18 23 9 40 43 48 32 24 32 13 12 22 19 25 10 4 13 20 11 10 22 12 10 12 12 9 30 32 21 32 17 10 8 14 30 8 5 5 4 13 37 15 15 9 6 9 24 36 27 13 38 7 23 4 15 10 9 13 13 10 24 13 8 6 15 47 28 34 27 11 14 34 47 33 32 13 19 5 5 4 5 5 6 7 16 29 11 20 10 13 19 5 27 29 27 6 8 9 6 11 27 7 7 6 7 6 10 10 8 7 10 19 32 38 9 12 18 6 8 21 16 11 8 6 4 5 6 1 1 2 4 4 4 21 7 18 17 11 14 5 9 6 18 22 6 4 14 22 17 20 13 3 2 2 3 12 9 5 12 10 13 7 4 11 7 6 17 7 2 2 12 4 3 7 17 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_13245987_13247176
seq2: B6Ng01-335O06.b_45_1184

seq1  GAATTCTTCATTTTAATTTAATTCCTTTTAATCATGCAAAGGCTGAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATTTTAATTTAATTCCTTTTAATCATGCAAAGGCTGAAGCC  50

seq1  AATATAATTTAAGTCTTCTGTCTGGGTCCAGGGAGAAAGATCCTCTGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATTTAAGTCTTCTGTCTGGGTCCAGGGAGAAAGATCCTCTGATG  100

seq1  CTCAGAAGGAGGGAAGTGAGGGACTAACATTTACAGAGGAAGGAGCTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAGGAGGGAAGTGAGGGACTAACATTTACAGAGGAAGGAGCTGGA  150

seq1  CCTTAAGACTTTGGTCTTGAGCATCTGCCTTAGGTTGGTGCATTGTCTAT  200
      |||||||||||||||||||| |||||| ||||||||||||||||||||||
seq2  CCTTAAGACTTTGGTCTTGACCATCTGTCTTAGGTTGGTGCATTGTCTAT  200

seq1  GCCTGCACCTTTCTGGAATTGTCAGCTGCAGCCAGGGCTGTTTACAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCACCTTTCTGGAATTGTCAGCTGCAGCCAGGGCTGTTTACAAGAC  250

seq1  ACGTCCTGCAATGTGCTACCCAGAGCCCACTGTGCCCCTGCTCCCAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCCTGCAATGTGCTACCCAGAGCCCACTGTGCCCCTGCTCCCAATGT  300

seq1  GCACTTTCTTGTGGGCAGACCCTGCCTTGGCCACCAACACTTGATCTACT  350
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  GCACTTTCTTGTGGGCAGACCCTGCCTTGGCCGCCAACACTTGAGCTACT  350

seq1  ACTGTCCTGCCTGCAGATGTGTCAGCCTTCAGCAGCAGCTCTTGTTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCCTGCCTGCAGATGTGTCAGCCTTCAGCAGCAGCTCTTGTTCCAT  400

seq1  GTGCTAGGGACCCTCTGGAGTGCAGTTTTGAGTTCACATTTCTCAATGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGGGACCCTCTGGAGTGCAGTTTTGAGTTCACATTTCTCAATGTC  450

seq1  TCAGTTGTAGAAATATTTAATCCTGACCTGGGGTTTCTACCTCTCCTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGTAGAAATATTTAATCCTGACCTGGGGTTTCTACCTCTCCTTAG  500

seq1  ACAACTTACTTCTAGGGTAAAACACACACACACACACACACACACACACA  550
      |||||||||||||||||||||||||||||||||||||||||||       
seq2  ACAACTTACTTCTAGGGTAAAACACACACACACACACACACAC-------  543

seq1  CACACACACACACACACACATACACATACACACACACATACATACACACA  600
                                                        
seq2  --------------------------------------------------  543

seq1  CACATACACATACACATACACACACACATACACACACACACACATACACA  650
                 ||| ||||||||||||||||||||||        |||||
seq2  -----------ACATATACACACACACATACACACAC--------ACACA  574

seq1  CACACACACACACACACACACACACACACACACACACACACACACACACA  700
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TACACACACACACACACACACACACACACACACACACACACACACACAGA  624

seq1  GAGCCTTTATATTTACAATAAGCCTTAAATAGTACAAAAGCTTGGCAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTTATATTTACAATAAGCCTTAAATAGTACAAAAGCTTGGCAGCT  674

seq1  GTCTATGTTCTATGCTATTAGAATGTACTTTCCTACCAATAACCCCAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATGTTCTATGCTATTAGAATGTACTTTCCTACCAATAACCCCAAGT  724

seq1  TACTAGTTACTATGTTTCATCTGTGCTGCTCTTAATCTAATTGGACAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTTACTATGTTTCATCTGTGCTGCTCTTAATCTAATTGGACAGCC  774

seq1  CTCAGGGCCATGTTCTCTTGAGTCCTAAACCATGGTGGCTTCTTCTT-CC  899
      |||||||||| |||||||||||||||||||||||||||||||||||| ||
seq2  CTCAGGGCCACGTTCTCTTGAGTCCTAAACCATGGTGGCTTCTTCTTCCC  824

seq1  TTCTCCCTTGTGGTCCCTTTCCAATCCCCATGTCTGGGAAACCTAAACTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCTTGTGGTCCCTTTCCAATCCCCATGTCTGGGAAACCTAAACTC  874

seq1  CACCTCTGTCTCTTCTGCCCAACTATTGACTTTATTTACCAATCAGACAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTGTCTCTTCTGCCCAACTATTGACTTTATTTACCAATCAGACAT  924

seq1  ATCTTGGGG--CCAAGGT--GTATGTGA-GGACTCTCTCA-TCTCTGGG-  1042
      |||||||||  |||||||   ||||||| ||||||||||| |||||||| 
seq2  ATCTTGGGGGCCCAAGGTTGTTATGTGAGGGACTCTCTCATTCTCTGGGA  974

seq1  ACAACCA-GGTCAT-GGGGGCCCA-CACTTAGCATTACAATAG-ATAGCA  1088
      ||||||| |||||| ||||||||| |||||||||||||||||| ||||||
seq2  ACAACCAGGGTCATGGGGGGCCCACCACTTAGCATTACAATAGAATAGCA  1024

seq1  AAAGACCAAA--CCTTAATAT-GTCTCC--TGCA-TTCACCATCTGTTTC  1132
      ||||||||||  | ||||||| ||||||   ||| |||||||||||||||
seq2  AAAGACCAAAACCTTTAATATGGTCTCCCTGGCATTTCACCATCTGTTTC  1074

seq1  AACAACTGCAGA-GCCAG-TGT--GTCTGAGA-GGGCAATCACCACC--A  1175
       ||||||||||| ||||| |||   ||||||| ||||||||||||||  |
seq2  -ACAACTGCAGAGGCCAGTTGTTGTTCTGAGAGGGGCAATCACCACCCTA  1123

seq1  TCCC-TGGTATC-ATTC  1190
      |||| ||||||| ||||
seq2  TCCCTTGGTATCTATTC  1140

seq1: chr17_13419804_13420960
seq2: B6Ng01-335O06.g_70_1233 (reverse)

seq1  AGGCATCAAGGGCTGGACTAGCAAGATAGGAAATGCGATGAGGAAGCTCT  50
      ||||||||  ||||| |||||| ||||  |||||||||||||||||||||
seq2  AGGCATCA--GGCTGAACTAGC-AGAT--GAAATGCGATGAGGAAGCTCT  45

seq1  GTTGCTGTATCCCAT-CAAATGAG-ACATCTCACCTGGGGCAGA-GGAG-  96
      || |||||||||||| |||||||| |||||||||||||| |||| |||| 
seq2  GTAGCTGTATCCCATCCAAATGAGAACATCTCACCTGGGCCAGAGGGAGA  95

seq1  AGTCTCCCCC--AAAAAATAAGAC-ACAGGAAGGGTGTCAGGA-GAACGA  142
      ||||||||||  ||||| |||||| |||| ||||||||||||| ||||||
seq2  AGTCTCCCCCCAAAAAATTAAGACAACAGAAAGGGTGTCAGGAGGAACGA  145

seq1  GCATTCGG-CTCGGCACAGGTACATTTTTGTATTTGAATGTATCTATGTT  191
      |||||||| ||||||||||||||||||||||||| |||||||||||||||
seq2  GCATTCGGCCTCGGCACAGGTACATTTTTGTATTGGAATGTATCTATGTT  195

seq1  ACTCATGTCTGT-GTCAACTGGCAGATTATACTTATGAATATGTATATGT  240
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACTCATGTCTGTGGTCAACTGGCAGATTATACTTATGAATATGTATATGT  245

seq1  ATATGGTGCAATGCATGGTGAAGCTAGGTCTAGACACCTTGGGAT-AATG  289
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATATGGTGCAATGCATGGTGAAGCTAGGTCTAGACACCTTGGGATAAATG  295

seq1  GTTAAATTGAACCTGCCAACATATCTAGCATCCCAG-AAGGTATCTCCTG  338
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTTAAATTGAACCTGCCAACATATCTAGCATCCCAGAAAGGTATCTCCTG  345

seq1  TGCGTATCCTGCATGATGAACAAGAAGGAGAACTGACCATGCTAGGGAGA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTATCCTGCATGATGAACAAGAAGGAGAACTGACCATGCTAGGGAGA  395

seq1  GGAAGTAGGAGAAGGAAGAGGAGGAGATGCTGAGGGAGGAGAGGGTGGTA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAGGAGAAGGAAGAGGAGGAGATGCTGAGGGAGGAGAGGGTGGTA  445

seq1  TTTGGTGGGAAATAGTAGATGGGGGGAAGAGGTTCAGACAGGAGGAGGCA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGGGAAATAGTAGATGGGGGGAAGAGGTTCAGACAGGAGGAGGCA  495

seq1  ATTTGGGGGAGCAGTGTGAAACAGGGTAACCCCAGCTGGAGAGATGCCCT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGGGAGCAGTGTGAAACAGGGTAACCCCAGCTGGAGAGATGCCCT  545

seq1  GTGCAGCTGAGGTTCTCAGAGTCCCTCTCACATGTGCTTTTGCATTTTAG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGCTGAGGTTCTCAGAGTCCCTCTCACATGTGCTTTTGCATTTTAG  595

seq1  AAGATCACTAGAGGATGCCGGATGCTATGATTCAACAGTTATAGTATTGG  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCACTAGAGGATGCCGGATGCTATGATTCAACAGTTATAGTATTGG  645

seq1  AAAGGACCCATGTATAGACATGGACCTGCAAAAGGGAACCTTGTGGAAAG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACCCATGTATAGACATGGACCTGCAAAAGGGAACCTTGTGGAAAG  695

seq1  GCATCATGTTCTGGGTCCAGCCAGAGGGAAGAAAGCAAATGATGAAATCC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATGTTCTGGGTCCAGCCAGAGGGAAGAAAGCAAATGATGAAATCC  745

seq1  CAGATGGTCTCCGGGATCACCATTCCGAGCAGGGGCTGAAAGCCTGTCCA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGTCTCCGGGATCACCATTCCGAGCAGGGGCTGAAAGCCTGTCCA  795

seq1  AAGCTGGTAGAGACAAAAGCCCCTCTGCCTACCCAGGGTCATAATCAGAC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGTAGAGACAAAAGCCCCTCTGCCTACCCAGGGTCATAATCAGAC  845

seq1  TCCTGCTCTGAGAATAAAATAGATGTTTGTGAAAGATGACCTCGGAGGTT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTCTGAGAATAAAATAGATGTTTGTGAAAGATGACCTCGGAGGTT  895

seq1  TTCCTGCCTCTTCTTTACATAGGAAAAATGTTCCTGTGGTGTTCAAAAGC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCCTCTTCTTTACATAGGAAAAATGTTCCTGTGGTGTTCAAAAGC  945

seq1  CCCAGGTAGAATAACTTCACACCCCAAACCACCAGATCATTAAAAGTGCC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTAGAATAACTTCACACCCCAAACCACCAGATCATTAAAAGTGCC  995

seq1  TTTGAAGGGACCAAGCTTTCAGGTACCTGAAGTGGGGGAATGTAGAAGCT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGGACCAAGCTTTCAGGTACCTGAAGTGGGGGAATGTAGAAGCT  1045

seq1  GGGTGTGGACTTTGGGTACTTCTGGACCCAGCAGCATGATCAGAAGGACC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGGACTTTGGGTACTTCTGGACCCAGCAGCATGATCAGAAGGACC  1095

seq1  AGAGAGAACATTAGATACCATCAGCTTGACCCACTTACACAGAGGCAAGC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAACATTAGATACCATCAGCTTGACCCACTTACACAGAGGCAAGC  1145

seq1  CCAGTCAACCTGTGAATTC  1157
      |||||||||||||||||||
seq2  CCAGTCAACCTGTGAATTC  1164

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Alignment Information