BAC Information

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BAC

Clone NameB6Ng01-340O22
Chromosome17 (Build37)
Map Location 37,962,820 - 37,963,756
singlet/doubletsinglet
Overlap genenone
Upstream geneTrim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124
Downstream geneOlfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340O22.bB6Ng01-340O22.g
ACCGA124474GA124475
length1,0401,177
definitionB6Ng01-340O22.b B6Ng01-340O22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatagctgaacaagaaattattttacttcctcatttctttctctt
tcctgctatatagtaataaaaagactatttcaatcctatacacaaagcaa
agattacaaaagaagaaagtaggaacagcattatcttattcttatctcac
aagcaggacactaaaatatcttagtaattccagagcaaaggccaatgacc
cttaatggatgcctggtgacattttaattttccttagtgaccccttggaa
gttatgtgtaagtattacatagggataacgaccatggtgggaatgtcact
aattgactggaatagagcaggcagtaacaccagtaacacagtgacatgag
gttaggactggctatgatgtccccacactagaaagaatttaatgtatcta
aatacaaggttaagtgcattaaagaatatgtaacatcgctgcctatagaa
gatcctctgccacaggaatccacacccaaacagcatcagcagggagtgag
tatcccaggagtgctaacaggcctgtgagtataggtaggatcaccactgc
tgctcagaggaactctcccagaaccctcaggacacaggaagcaagggaat
gcctgggacaagagtcttccagtctctttctgctcccagagctgatcctg
tgccacagaactacatacacaaatatcaccaggaaagagcaagatgccca
agcatgcctacacatttgtgagcacaggtaagaccaatatttctaatcaa
attcctggcccaagagggacacctacagagccatcagacacaggaaccaa
aggatcagctggggacagaattcttctggtctctatctacaccccagagc
tgaccctgtaccatagttctccatatccaaactcctctaggagagaactg
gtctcccaggaatacggacacacaggcttgaaaaagggacacaccaaact
cagagacagcagaccagttaactccagagatacccagatggcgaaaggca
agtgcagacataagcaacagaacatgactacttggcatca
gaattctcacctgaggaataccgaatggcagagaagtacctgaaaaaatg
ctcagcatccttaatcatcagagacatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
atatgctggcgtggatgtggagaaagagtaccactcctccattgttggag
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactatcggaggatccctcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gaccctcacaggggaatggatacagaaaatgtggtacatttacacaatgg
aatactactcagctattaaaaacaatgaatttatgaaatttctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcaaatgatatgtactcactgataagtggatattagcccagaaact
tagaatacccaagatataagatacaatttgtcaaacaatttgtgaaactc
aaaaagaatggaaaccaaagtgtggacactttgccccttcttagaattgg
gaacaaaacacacatggaaggaattacagagacaaactatggagctgaga
ccaaaggatggaccatctagagactgccagatcccaggatccattccata
atcagcctccaaatgctgacaccattgcatacactagcaagagtttgctg
aaaggaccctgatatagctgtctcttgtgacagtatgcctgagcctagca
aagacagaattggatgctcacagtcagctattggatggatcatagggccc
aatggaggagctagagaaagtacccaaggagctaaagggatctgcaccct
atagtggacacaatatgaactatcagtaccaggagctcgtgtctctagct
gcatatgtatcagagatgactagttgtcatcgtgaaaagaagagaccatg
gtcatgcaaagtttaatggctcagtataggaccgcagtgccagaagtgga
atgtgggccgggtagaaagaagattgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37962820_37963756
seq2: B6Ng01-340O22.b_46_982

seq1  GAATTCATAGCTGAACAAGAAATTATTTTACTTCCTCATTTCTTTCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGCTGAACAAGAAATTATTTTACTTCCTCATTTCTTTCTCTT  50

seq1  TCCTGCTATATAGTAATAAAAAGACTATTTCAATCCTATACACAAAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTATATAGTAATAAAAAGACTATTTCAATCCTATACACAAAGCAA  100

seq1  AGATTACAAAAGAAGAAAGTAGGAACAGCATTATCTTATTCTTATCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACAAAAGAAGAAAGTAGGAACAGCATTATCTTATTCTTATCTCAC  150

seq1  AAGCAGGACACTAAAATATCTTAGTAATTCCAGAGCAAAGGCCAATGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGACACTAAAATATCTTAGTAATTCCAGAGCAAAGGCCAATGACC  200

seq1  CTTAATGGATGCCTGGTGACATTTTAATTTTCCTTAGTGACCCCTTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGGATGCCTGGTGACATTTTAATTTTCCTTAGTGACCCCTTGGAA  250

seq1  GTTATGTGTAAGTATTACATAGGGATAACGACCATGGTGGGAATGTCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTGTAAGTATTACATAGGGATAACGACCATGGTGGGAATGTCACT  300

seq1  AATTGACTGGAATAGAGCAGGCAGTAACACCAGTAACACAGTGACATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGACTGGAATAGAGCAGGCAGTAACACCAGTAACACAGTGACATGAG  350

seq1  GTTAGGACTGGCTATGATGTCCCCACACTAGAAAGAATTTAATGTATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGACTGGCTATGATGTCCCCACACTAGAAAGAATTTAATGTATCTA  400

seq1  AATACAAGGTTAAGTGCATTAAAGAATATGTAACATCGCTGCCTATAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAGGTTAAGTGCATTAAAGAATATGTAACATCGCTGCCTATAGAA  450

seq1  GATCCTCTGCCACAGGAATCCACACCCAAACAGCATCAGCAGGGAGTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCTGCCACAGGAATCCACACCCAAACAGCATCAGCAGGGAGTGAG  500

seq1  TATCCCAGGAGTGCTAACAGGCCTGTGAGTATAGGTAGGATCACCACTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCAGGAGTGCTAACAGGCCTGTGAGTATAGGTAGGATCACCACTGC  550

seq1  TGCTCAGAGGAACTCTCCCAGAACCCTCAGGACACAGGAAGCAAGGGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGAGGAACTCTCCCAGAACCCTCAGGACACAGGAAGCAAGGGAAT  600

seq1  GCCTGGGACAAGAGTCTTCCAGTCTCTTTCTGCTCCCAGAGCTGATCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGACAAGAGTCTTCCAGTCTCTTTCTGCTCCCAGAGCTGATCCTG  650

seq1  TGCCACAGAACTACATACACAAATATCACCAGGAAAGAGCAAGATGCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAGAACTACATACACAAATATCACCAGGAAAGAGCAAGATGCCCA  700

seq1  AGCATGCCTACACATTTGTGAGCACAGGTAAGACCAATATTTCTAATCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCCTACACATTTGTGAGCACAGGTAAGACCAATATTTCTAATCAA  750

seq1  ATTCCTGGCCCAAGAGGGACACCTACAGAGCCATCAGGACACAGGAACC-  799
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  ATTCCTGGCCCAAGAGGGACACCTACAGAGCCATCA-GACACAGGAACCA  799

seq1  AAGGATCAGCTGGGGACAGAATTCTTCTGGTCTCTATCTACACCCCAGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATCAGCTGGGGACAGAATTCTTCTGGTCTCTATCTACACCCCAGAG  849

seq1  CTGACCCTGTACCATAGTTCTCCATATCCAAACTCCTCTAGGAGAGAACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCTGTACCATAGTTCTCCATATCCAAACTCCTCTAGGAGAGAACT  899

seq1  GGTCTCCCAGGAATACGGACACACAGGCTTGAAAAAGG  937
      ||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCCAGGAATACGGACACACAGGCTTGAAAAAGG  937