BAC Information

Click to search

BAC

Clone NameB6Ng01-342K19
Chromosome17 (Build37)
Map Location 37,682,685 - 37,683,827
singlet/doubletsinglet
Overlap genenone
Upstream geneH2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111
Downstream geneOlfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342K19.bB6Ng01-342K19.g
ACCGA125682GA125683
length1,1461,176
definitionB6Ng01-342K19.b B6Ng01-342K19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtagtggagttaagttgagctctgagtttaaatgtttctgtt
aatgagaaaaccatcatcattgtccttttctcaaataacttctatatcct
ggaccagactattacttttgtaggttattcagagagatgatacatgtttt
taggcaggattaacctaataaggtagaccaagttcataattataatgcat
atgtataagaatgtttatagatttaaacaatgttgggagccattaaggca
acgctattgtcctaatctctgaattgggcctctcccccccctccccccga
gaagaaaagagggtcaaaagcgggccacgggacccacagctccaagaaag
tcagcgccggatgtctgaccgacctcaagatgtaccctgataccaccaag
ttcctgcttccccttgtagtcgccaaaagaaaaatttccgctgccccatc
cctcctgttgagaagtacttcctctctttctgctgccccatccctcctgc
tgaggtgcatatcctctgccccattcctcctgctgaaaggcacttcccct
tttgcttgtgtatttaaaccttgggcctggctaatacattttggggtctt
gatacaacttcagaacggtttccgcgtcgttactcgtacaagaccctcgt
ctctctctaccccccatttggttattaggaggaggtcccctcgagatcct
cgaataactggacctgctggacgggtcaaaacaacattataggtgcacca
aaatgtataaataagtttacatcatctatctgtacttttaaagtagttca
aaaagaaattatgggtgattgagtaacaaatattagaaataatgctgtga
gttcatagaaaataaaactataacaacaataaactgtaggaaagaaaaca
tgtcacaatgtaggactgagacataattttaattcttcagagtgatactg
aattattattgtacttgaatggtatctatacttgaattagatcttaaaac
atgaccattaataccgatttatgaacttgataggatttggcaaaggaaga
caggacttctgggcacacatgtgagaaattactttgatttaagttaattg
gaggtgagaaagaccaacctaagtggggcagtatctatcctgagtt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaacacccttctcaatagtcacaaataatataaa
atatcttggcgtgactctaactaaggaagtgaaagatctgtatgataaaa
acttcaaatctctgaagaaagaaattaaagaagatctcagaagatggaaa
gatctcccatgctcatggattggcaggatcaacattgtaaaaatggctat
cttgccaaaggcaatctacaaattcaatgcaatccccatcaaaattccaa
ctcaattcttcaacgaattagaaggagcaatttgcaaattcatctggaat
aacaaaaaacctaggatagccaaaagtcttctcagggataaaaaaaacct
ctggtggaatcaccatgcctgacctaaagctttactacagagcaattgtg
ataaaaactgcatggtactggtatagagacagacaagtagaccaatggaa
tagaattgaagaaccagaaatgaacccacacacctatggtcacctgatct
tcgacaagggagctaaaaccatccagtggaagaaagacagcattttcaac
aattggtgctggcacaactggttgttatcatgtagaagaatgtgaatcga
tccatactcatctccttgtactaaggtcaaatctaagtggatcaaggaac
ttcacataaaaccagagacactgaaacttatagaggagaaagtggggaaa
agccttgaagatatgggcacaggggaaaaattcctgacagaacagcaatg
gcttgtgctgtagatcgagaattcacaaatgggacctatgaaactccaag
tttctgcaagcaaaagacactgtcagtagacaaaagacacaacagattgg
gaaggattcttactatctaaatcgatagggactatatcaacatatataag
gaactcagatgtggacttcggaattcactaccatttaaattggggcctct
agaatccgtgacacagagagtaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37682685_37683827
seq2: B6Ng01-342K19.b_47_1192 (reverse)

seq1  AACTCAGGGAATAG-TACTGCCCACTTTAGGGTGGGTCTTCTCACCT-CA  48
      ||||||||  |||| ||||||||   ||||| |||   ||||||||| ||
seq2  AACTCAGG--ATAGATACTGCCCCACTTAGGTTGGTCTTTCTCACCTCCA  48

seq1  ATTAACTT-AATCAAAGTAATTTCTCACATGTGTGCCCAG-AGTCCTGTC  96
      |||||||| ||||||||||||||||||||||||||||||| |||||||||
seq2  ATTAACTTAAATCAAAGTAATTTCTCACATGTGTGCCCAGAAGTCCTGTC  98

seq1  -TCCTTTGCCAAATCCTATCAAGTTCAT-AATCGGTATTAATGGTCATGT  144
       ||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCCTTTGCCAAATCCTATCAAGTTCATAAATCGGTATTAATGGTCATGT  148

seq1  TTTAAGATCTAATTCAAGTATAGATAACCATTCAAGTACAATAATAATTC  194
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTAAGATCTAATTCAAGTATAGAT-ACCATTCAAGTACAATAATAATTC  197

seq1  AGTATCACTCTGAAGAATTAAAATTATGTCTCAGTCCTACATTGTGACAT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCACTCTGAAGAATTAAAATTATGTCTCAGTCCTACATTGTGACAT  247

seq1  GTTTTCTTTCCTACAGTTTATTGTTGTTATAGTTTTATTTTCTATGAACT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTTTCCTACAGTTTATTGTTGTTATAGTTTTATTTTCTATGAACT  297

seq1  CACAGCATTATTTCTAATATTTGTTACTCAATCACCCATAATTTCTTTTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCATTATTTCTAATATTTGTTACTCAATCACCCATAATTTCTTTTT  347

seq1  GAACTACTTTAAAAGTACAGATAGATGATGTAAACTTATTTATACATTTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTACTTTAAAAGTACAGATAGATGATGTAAACTTATTTATACATTTT  397

seq1  GGTGCACCTATAATGTTGTTTTGACCCGTCCAGCAGGTCCAGTTATTCGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCACCTATAATGTTGTTTTGACCCGTCCAGCAGGTCCAGTTATTCGA  447

seq1  GGATCTCGAGGGGACCTCCTCCTAATAACCAAATGGGGGGTAGAGAGAGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCGAGGGGACCTCCTCCTAATAACCAAATGGGGGGTAGAGAGAGA  497

seq1  CGAGGGTCTTGTACGAGTAACGACGCGGAAACCGTTCTGAAGTTGTATCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGGTCTTGTACGAGTAACGACGCGGAAACCGTTCTGAAGTTGTATCA  547

seq1  AGACCCCAAAATGTATTAGCCAGGCCCAAGGTTTAAATACACAAGCAAAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCCAAAATGTATTAGCCAGGCCCAAGGTTTAAATACACAAGCAAAA  597

seq1  GGGGAAGTGCCTTTCAGCAGGAGGAATGGGGCAGAGGATATGCACCTCAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGTGCCTTTCAGCAGGAGGAATGGGGCAGAGGATATGCACCTCAG  647

seq1  CAGGAGGGATGGGGCAGCAGAAAGAGAGGAAGTACTTCTCAACAGGAGGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGGATGGGGCAGCAGAAAGAGAGGAAGTACTTCTCAACAGGAGGG  697

seq1  ATGGGGCAGCGGAAATTTTTCTTTTGGCGACTACAAGGGGAAGCAGGAAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGCAGCGGAAATTTTTCTTTTGGCGACTACAAGGGGAAGCAGGAAC  747

seq1  TTGGTGGTATCAGGGTACATCTTGAGGTCGGTCAGACATCCGGCGCTGAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGTATCAGGGTACATCTTGAGGTCGGTCAGACATCCGGCGCTGAC  797

seq1  TTTCTTGGAGCTGTGGGTCCCGTGGCCCGCTTTTGACCCTCTTTTCTTCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGAGCTGTGGGTCCCGTGGCCCGCTTTTGACCCTCTTTTCTTCT  847

seq1  CGGGGGGAGGGGGGGGAGAGGCCCAATTCAGAGATTAGGACAATAGCGTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGGGAGGGGGGGGAGAGGCCCAATTCAGAGATTAGGACAATAGCGTT  897

seq1  GCCTTAATGGCTCCCAACATTGTTTAAATCTATAAACATTCTTATACATA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAATGGCTCCCAACATTGTTTAAATCTATAAACATTCTTATACATA  947

seq1  TGCATTATAATTATGAACTTGGTCTACCTTATTAGGTTAATCCTGCCTAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTATAATTATGAACTTGGTCTACCTTATTAGGTTAATCCTGCCTAA  997

seq1  AAACATGTATCATCTCTCTGAATAACCTACAAAAGTAATAGTCTGGTCCA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTATCATCTCTCTGAATAACCTACAAAAGTAATAGTCTGGTCCA  1047

seq1  GGATATAGAAGTTATTTGAGAAAAGGACAATGATGATGGTTTTCTCATTA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATAGAAGTTATTTGAGAAAAGGACAATGATGATGGTTTTCTCATTA  1097

seq1  ACAGAAACATTTAAACTCAGAGCTCAACTTAACTCCACTACAGGAATTC  1143
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACATTTAAACTCAGAGCTCAACTTAACTCCACTACAGGAATTC  1146