BAC Information

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BAC

Clone NameB6Ng01-344A13
Chromosome17 (Build37)
Map Location 33,516,967 - 33,518,173
singlet/doubletsinglet
Overlap geneZfp101
Upstream geneWiz, A430107D22Rik, Pglyrp2, 4732474A20Rik, EG208285, Cyp4f16, LOC667178, LOC677156, EG631304, Cyp4f15, LOC623809, 9030612M13Rik, Zfp811, 6030490I01Rik, LOC631266, BC066107, Cyp4f14, Cyp4f13, 6030422M01Rik, Zfp472, C920016K16Rik, 1700065O13Rik, 4921501E09Rik, Zfp563, Morc2b, LOC100038859, LOC100038860, LOC100043474, Zfp422-rs1, Olfr63, LOC100043468, Zfp81
Downstream gene1700029I08Rik, LOC100042953, Adamts10, Myo1f, Zfp414, Pram1, Hnrpm, March2, Rab11b, Angptl4, Ankrd47, Rps28, Ndufa7, Cd320, LOC100042967, LOC630219, LOC100042970, BC051226, Daxx, Zbtb22, Tapbp, Rgl2, H2-Ke2, Wdr46, B3galt4, Rps18, Vps52, EG630499, LOC100042989, AA388235, H2-K1, LOC654352, Ring1, H2-Ke6, Slc39a7, Rxrb, Col11a2, LOC672505, H2-Pa, H2-Oa, Brd2, LOC100043003, LOC100043522, H2-DMa, H2-DMb2, H2-DMb1, Psmb9, Tap1, Psmb8, Tap2, H2-Ob, H2-Ab1, H2-Aa, H2-Eb1, H2-Eb2, H2-Ea, Btnl2, LOC100038862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344A13.bB6Ng01-344A13.g
ACCGA126642GA126643
length1,1251,192
definitionB6Ng01-344A13.b B6Ng01-344A13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatagtaaaagcaatacacagcaaacca
gtagccaacatcaaactaaatggacagaaatttgaagcaatcccactaaa
atcaggcaccagacaaggctgtcccctctctctccctttctattaaatat
agtatttgaagttctagctagaacaattaaacaagaaaaggaagtcaaaa
aggatacaaactgaacaggcagatttgcagagaatatgatagtatactta
agtgacccgaaaaattccaccagaaatctcctacagctaataaacaactt
cagcaaagtggccagatacaacattaactcaaacaaataaaagctttcct
atacttagaagataaacagactgagaaagaaattagggaaatgacaccct
tcacgattgtcacaaacaacattaagtatcttggtgtgactctaactaaa
caagtgaaagagctatattgtagtctcccctcccccagcctgaaacctgc
ttgctcaggggtggagcttcccgctcaatcgttctgccatgcccactgct
ggaacctgccactttgctgttaggagccgtgcacttggtcaccctgctat
tggactccaagattatttggcgggaattgggcccctcccccttcctttat
aactgagtgccgaaatagtaaaaattgaaccttgagcagagagctttgtc
ttggttccttccttatctctcgcccacctagcccctcttctcttccaggt
ttccaaaatgcctttccaggttagaacccaggttgtgatctgctggccgg
atacaacactatatgacaagaacttcaagtttctgaataaagaaatcaaa
gaagaccttagaaaatggaaagatctcccatgctcatggattggcaggat
taaaaatggccatcttgaggagctaaagggctctgcaaccctatagtgga
acaacatatgaactaaccagtaccccccggagctcgtgtctctagctgca
tatgtatcagagatggcctagtcagccatcattggaaagagagcccattg
gtcttgcaaactttatatgcctccatacaggaacaccagggccaagaagt
gggaatgggggggggtaaggggaat
gaattcacactggagagaagccgtatacatgtaagcattgcacaaaaact
tttaccacttccagtacccgtaacagtcatgaaaaaactcacactgcaga
gaagcattttgcgtgtaacctttgtgggaaaaccttcaacagtcagagtt
cctattacactcataaaaaaatacactctatgaaagagaaactttatgta
tgtaaacactgtgggaaagaattcacttactgtggtaatttccttaagca
tgaaagaagtcacaccatggaaacattatccatatgaacaataggtaaaa
gcatttctgggtcctacatcccattagaaacctatataaaaatctcacag
tgacagaacttgtataactataaactgtgtggtcaacttgcctttattgt
gaggtatggaaaaagtttgggtgggccacgcgagatagcttagctagtca
tggttctttaggatagcctgattttgattttaaccctgaaactcacatgg
agttcccaaaagttgtcttctgagttccacatgtacaacattgaatgtat
ttgtgtatgtccacaaataaagtaaataaatggagtgctaaacaagaaaa
aaatgaaaacatgttgaagtggaaacagacatgaccagcaaaatgtaatt
ttagccctaaaataccagcatatgtaggatgaaatcctgttcccatacat
attttgatgtctatctgctttccttacaggtagggtaggaggctagcaaa
atacagtatctaatccaggacatttgaatagcacttaggacttttaaggt
gaacctgttccaaccaaatgtaaattttaaagagaaaataaagctgtgtg
attgaaatagaatgttttcatgtagttaaatcatataaggagaatttaag
tttgtatattttagaaataacctgaaagaagaacaataaaattttagcat
tttgatctttggttcattcccacacaagactgattttgctttttgtttgt
aatcttggagttgagatttgcttaataaaaaaaaaaaagatttgctcaat
aacattggcataaatttctggtcttgccattcctgtcactgaaagacaag
ctacaagaaactgtgtcaaccatagcagcatttaaaagatgattgcagcc
tggaatgttacttcctgaataccgtgtttgccactcctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_33516967_33518173
seq2: B6Ng01-344A13.g_67_1258 (reverse)

seq1  AGAGAAGAGTGGCAAACACTGTTAATCACGTATGTTAACCATTTTTCCAG  50
      ||||| ||||||||||||| | || ||| | |   ||||     ||||||
seq2  AGAGAGGAGTGGCAAACAC-GGTATTCAGGAA--GTAAC----ATTCCAG  43

seq1  GCTGCAATCCATCTTTTTAAATGCTTGCTATTGTTTGACACAGTTTCTTG  100
      |||||||| |||| |||||||||| ||||| || ||||||||||||||| 
seq2  GCTGCAAT-CATC-TTTTAAATGC-TGCTA-TGGTTGACACAGTTTCTT-  88

seq1  GTAGCTTGTCTTTCAAGTGACAGGAATGGC-AGACCAGAAATTTATGCCA  149
      |||||||||||||| ||||||||||||||| |||||||||||||||||||
seq2  GTAGCTTGTCTTTC-AGTGACAGGAATGGCAAGACCAGAAATTTATGCCA  137

seq1  ATGTTATTGAGCAAATCTTTTTTTTTTTTTATTAAGCAAATCTCAACTCC  199
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATGTTATTGAGCAAATC-TTTTTTTTTTTTATTAAGCAAATCTCAACTCC  186

seq1  AAGATTACAAACAAAAAAGCAAAAATCAGTCTTGTGTGGGAATGAACCAA  249
      |||||||||||| ||||||| |||||||||||||||||||||||||||||
seq2  AAGATTACAAAC-AAAAAGC-AAAATCAGTCTTGTGTGGGAATGAACCAA  234

seq1  AGATCAAAATGCTAAAATTTTATTGTTCTTCTTTCAGGTTATTTCTAAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAAATGCTAAAATTTTATTGTTCTTCTTTCAGGTTATTTCTAAAA  284

seq1  TATACAAACTTAAATTCTCCTTATATGATTTAACTACATGAAAACATTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAACTTAAATTCTCCTTATATGATTTAACTACATGAAAACATTCT  334

seq1  ATTTCAATCACACAGCTTTATTTTCTCTTTAAAATTTACATTTGGTTGGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAATCACACAGCTTTATTTTCTCTTTAAAATTTACATTTGGTTGGA  384

seq1  ACAGGTTCACCTTAAAAGTCCTAAGTGCTATTCAAATGTCCTGGATTAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTCACCTTAAAAGTCCTAAGTGCTATTCAAATGTCCTGGATTAGA  434

seq1  TACTGTATTTTGCTAGCCTCCTACCCTACCTGTAAGGAAAGCAGATAGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTATTTTGCTAGCCTCCTACCCTACCTGTAAGGAAAGCAGATAGAC  484

seq1  ATCAAAATATGTATGGGAACAGGATTTCATCCTACATATGCTGGTATTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATATGTATGGGAACAGGATTTCATCCTACATATGCTGGTATTTT  534

seq1  AGGGCTAAAATTACATTTTGCTGGTCATGTCTGTTTCCACTTCAACATGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTAAAATTACATTTTGCTGGTCATGTCTGTTTCCACTTCAACATGT  584

seq1  TTTCATTTTTTTCTTGTTTAGCACTCCATTTATTTACTTTATTTGTGGAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTTTTTCTTGTTTAGCACTCCATTTATTTACTTTATTTGTGGAC  634

seq1  ATACACAAATACATTCAATGTTGTACATGTGGAACTCAGAAGACAACTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAAATACATTCAATGTTGTACATGTGGAACTCAGAAGACAACTTT  684

seq1  TGGGAACTCCATGTGAGTTTCAGGGTTAAAATCAAAATCAGGCTATCCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACTCCATGTGAGTTTCAGGGTTAAAATCAAAATCAGGCTATCCTA  734

seq1  AAGAACCATGACTAGCTAAGCTATCTCGCGTGGCCCACCCAAACTTTTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCATGACTAGCTAAGCTATCTCGCGTGGCCCACCCAAACTTTTTC  784

seq1  CATACCTCACAATAAAGGCAAGTTGACCACACAGTTTATAGTTATACAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTCACAATAAAGGCAAGTTGACCACACAGTTTATAGTTATACAAG  834

seq1  TTCTGTCACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCACTGTGAGATTTTTATATAGGTTTCTAATGGGATGTAGGACCC  884

seq1  AGAAATGCTTTTACCTATTGTTCATATGGATAATGTTTCCATGGTGTGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCTTTTACCTATTGTTCATATGGATAATGTTTCCATGGTGTGAC  934

seq1  TTCTTTCATGCTTAAGGAAATTACCACAGTAAGTGAATTCTTTCCCACAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCATGCTTAAGGAAATTACCACAGTAAGTGAATTCTTTCCCACAG  984

seq1  TGTTTACATACATAAAGTTTCTCTTTCATAGAGTGTATTTTTTTATGAGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACATACATAAAGTTTCTCTTTCATAGAGTGTATTTTTTTATGAGT  1034

seq1  GTAATAGGAACTCTGACTGTTGAAGGTTTTCCCACAAAGGTTACACGCAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAGGAACTCTGACTGTTGAAGGTTTTCCCACAAAGGTTACACGCAA  1084

seq1  AATGCTTCTCTGCAGTGTGAGTTTTTTCATGACTGTTACGGGTACTGGAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTCTCTGCAGTGTGAGTTTTTTCATGACTGTTACGGGTACTGGAA  1134

seq1  GTGGTAAAAGTTTTTGTGCAATGCTTACATGTATACGGCTTCTCTCCAGT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAAAAGTTTTTGTGCAATGCTTACATGTATACGGCTTCTCTCCAGT  1184

seq1  GTGAATTC  1207
      ||||||||
seq2  GTGAATTC  1192