BAC Information

Click to search

BAC

Clone NameB6Ng01-347C08
Chromosome17 (Build37)
Map Location 94,811,721 - 94,932,560
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC668885, LOC668886, Mettl4, 2700099C18Rik, LOC100043754, LOC668888, LOC100038868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347C08.bB6Ng01-347C08.g
ACCGA128839GA128840
length1,061292
definitionB6Ng01-347C08.b B6Ng01-347C08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,811,721 - 94,812,782)(94,932,269 - 94,932,560)
sequence
gaattctgacctctgttttcttacctgttatttgtttttctaccttcttg
agaatttgtaagtcctgtgaaggagagaaaatttaaagagattgtggaat
aaagtcaggtcatgctcaactttatctcttcttcatttgtcaaagaaata
ttggagcccctgaagatcagctggcccttcactttacatcctctctcttg
gtgacaacattcagtgttttaggttgaatggaactcctccaggccctggc
aggaaagggatttgaaaacccttcctctacaaacctctagaaatattgaa
cagtgtatgcaaaaatcattttcagtgtatgttcaaagagacaaaggatg
tcaaatattgggaggaaaataggcctccaaatgccaaaaaataagccaat
gatcattaaaaagtatcaaaaaatccctggcaagatgcctaagaagaaat
tttcagatgtatagtgataatttggcaaaataatgaaatgaggctgatgt
atatacacacaaaggaaatcaatgacacatcccactgaagactgatgggt
taagctgacaagttagaacaaacgcaacaatccaagcacctgagtaatca
gcttcatatgcatataatcccacatcaaaaagtcaaataatacattttaa
gtaaacaactaaatgtctataaagcttgactctatttgcatcaaactaac
tttccatgtgtatagaaagacctatagacacaaaccaaatcatggcacca
cagaacatgaaaatggactacaatttaaaaagtaggcaagataccagctt
gatagacatgtggctacaatgtaaaatataaaagatatgtgatgtagcca
ggaagtggtggcacacacctttaattccagcatttgggtggcaaaggccg
gtcaatttctgagttcgaggccagcctggtctacagagtgagttccagga
cagccagggctacacacagaaaccttgtctcaaagatgatgagagagaga
gagagagagagagagagagagagagagagagagagagagagagagagtgg
ttgaaaaggtt
caggacagacagggctaaacagagaaaccctgtctcccaaaaaaaaaaaa
aaaaaaaaaaaaagattttgccgtggttattgtgtctcttaactaagaca
catcatgtgccaatattcatctattgtgtagtccagccaaatatgtagca
gaggatggccttatgggacatcagtgagaggagaggcccttggtcctatg
aaggctcaatgccccagtgtagggaaatgccaggacaggaaagcaggagt
gggtgggttattgagcagggggaggggacataggataggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_94811721_94812782
seq2: B6Ng01-347C08.b_47_1107

seq1  GAATTCTGACCTCTGTTTTCTTACCTGTTATTTGTTTTTCTACCTTCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACCTCTGTTTTCTTACCTGTTATTTGTTTTTCTACCTTCTTG  50

seq1  AGAATTTGTAAGTCCTGTGAAGGAGAGAAAATTTAAAGAGATTGTGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTGTAAGTCCTGTGAAGGAGAGAAAATTTAAAGAGATTGTGGAAT  100

seq1  AAAGTCAGGTCATGCTCAACTTTATCTCTTCTTCATTTGTCAAAGAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAGGTCATGCTCAACTTTATCTCTTCTTCATTTGTCAAAGAAATA  150

seq1  TTGGAGCCCCTGAAGATCAGCTGGCCCTTCACTTTACATCCTCTCTCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCCCCTGAAGATCAGCTGGCCCTTCACTTTACATCCTCTCTCTTG  200

seq1  GTGACAACATTCAGTGTTTTAGGTTGAATGGAACTCCTCCAGGCCCTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAACATTCAGTGTTTTAGGTTGAATGGAACTCCTCCAGGCCCTGGC  250

seq1  AGGAAAGGGATTTGAAAACCCTTCCTCTACAAACCTCTAGAAATATTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGGATTTGAAAACCCTTCCTCTACAAACCTCTAGAAATATTGAA  300

seq1  CAGTGTATGCAAAAATCATTTTCAGTGTATGTTCAAAGAGACAAAGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTATGCAAAAATCATTTTCAGTGTATGTTCAAAGAGACAAAGGATG  350

seq1  TCAAATATTGGGAGGAAAATAGGCCTCCAAATGCCAAAAAATAAGCCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATTGGGAGGAAAATAGGCCTCCAAATGCCAAAAAATAAGCCAAT  400

seq1  GATCATTAAAAAGTATCAAAAAATCCCTGGCAAGATGCCTAAGAAGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTAAAAAGTATCAAAAAATCCCTGGCAAGATGCCTAAGAAGAAAT  450

seq1  TTTCAGATGTATAGTGATAATTTGGCAAAATAATGAAATGAGGCTGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGATGTATAGTGATAATTTGGCAAAATAATGAAATGAGGCTGATGT  500

seq1  ATATACACACAAAGGAAATCAATGACACATCCCACTGAAGACTGATGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACACAAAGGAAATCAATGACACATCCCACTGAAGACTGATGGGT  550

seq1  TAAGCTGACAAGTTAGAACAAACGCAACAATCCAAGCACCTGAGTAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGACAAGTTAGAACAAACGCAACAATCCAAGCACCTGAGTAATCA  600

seq1  GCTTCATATGCATATAATCCCACATCAAAAAGTCAAATAATACATTTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATATGCATATAATCCCACATCAAAAAGTCAAATAATACATTTTAA  650

seq1  GTAAACAACTAAATGTCTATAAAGCTTGACTCTATTTGCATCAAACTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAACTAAATGTCTATAAAGCTTGACTCTATTTGCATCAAACTAAC  700

seq1  TTTCCATGTGTATAGAAAGACCTATAGACACAAACCAAATCATGGCACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGTGTATAGAAAGACCTATAGACACAAACCAAATCATGGCACCA  750

seq1  CAGAACATGAAAATGGACTACAATTTAAAAAGTAGGCAAGATACCAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACATGAAAATGGACTACAATTTAAAAAGTAGGCAAGATACCAGCTT  800

seq1  GATAGACATGTGGCTACAATGTAAAATATAAAAGATATGTGATGTAGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGACATGTGGCTACAATGTAAAATATAAAAGATATGTGATGTAGCCA  850

seq1  GGAAGTGGTGGCACACACCTTTAATTCCAGCATTTGGGTGGCAAAGGCCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGGTGGCACACACCTTTAATTCCAGCATTTGGGTGGCAAAGGCCG  900

seq1  GTCAATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGA  950

seq1  CAGCCAGGGCTACACACAGAAACCTTGTCTCAAAAGATGAGTGAGAGAGA  1000
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  CAGCCAGGGCTACACACAGAAACCTTGTCTC-AAAGATGA-TGAGAGAGA  998

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGT  1048

seq1  GGTTG-AGAGGTT  1062
      ||||| | |||||
seq2  GGTTGAAAAGGTT  1061

seq1: chr17_94932269_94932560
seq2: B6Ng01-347C08.g_73_364 (reverse)

seq1  CCCCCTATCCTATGTCCCCTCCCCCTGCTCAATAACCCACCCACTCCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTATCCTATGTCCCCTCCCCCTGCTCAATAACCCACCCACTCCTGC  50

seq1  TTTCCTGTCCTGGCATTTCCCTACACTGGGGCATTGAGCCTTCATAGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTCCTGGCATTTCCCTACACTGGGGCATTGAGCCTTCATAGGAC  100

seq1  CAAGGGCCTCTCCTCTCACTGATGTCCCATAAGGCCATCCTCTGCTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCCTCTCCTCTCACTGATGTCCCATAAGGCCATCCTCTGCTACAT  150

seq1  ATTTGGCTGGACTACACAATAGATGAATATTGGCACATGATGTGTCTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCTGGACTACACAATAGATGAATATTGGCACATGATGTGTCTTAG  200

seq1  TTAAGAGACACAATAACCACGGCAAAATCTTTTTTTTTTTTTTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGACACAATAACCACGGCAAAATCTTTTTTTTTTTTTTTTTTTTT  250

seq1  TTTTGGGAGACAGGGTTTCTCTGTTTAGCCCTGTCTGTCCTG  292
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGAGACAGGGTTTCTCTGTTTAGCCCTGTCTGTCCTG  292