MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-350L22
Chromosome	17 (Build37)
Map Location	62,440,169 - 62,441,377
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC433129, EG620725, LOC100043560
Downstream gene	Efna5, Fbxl17
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC433129 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433129
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins pseudo : _no_value

name	EG620725 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620725 MGI:3647626
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100043560 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043560
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 85 mRNAs, 1467 ESTs, 27 Proteins pseudo : _no_value

name	Efna5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13640 MGI:107444
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Fbxl17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50758 MGI:1354704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 65 ESTs, 5 Proteins

name	Efna5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46560568 GeneID:13640 MGI:107444
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ephrin A5 transcript_id : NM_010109.2

name	Efna5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46560569 GeneID:13640 MGI:107444
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ephrin A5 transcript_id : NM_207654.1

name	Fbxl17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268887 GeneID:50758 MGI:1354704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 65 ESTs, 5 Proteins product : F-box and leucine-rich repeat protein 17, transcript variant 3 transcript_id : XM_925135.3

name	Efna5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753724 CCDS:CCDS28934.1 GeneID:13640 MGI:107444
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0045499 - chemorepellant activity [Evidence IDA]; GO:0048503 - GPI anchor binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0031290 - retinal ganglion cell axon guidance [Evidence IDA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : ephrin A5 isoform 2 protein_id : NP_034239.1

name	Efna5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46560570 CCDS:CCDS28935.1 GeneID:13640 MGI:107444
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0045499 - chemorepellant activity [Evidence IDA]; GO:0048503 - GPI anchor binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0031290 - retinal ganglion cell axon guidance [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : ephrin A5 isoform 1 protein_id : NP_997537.1

name	Fbxl17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94402100 GeneID:50758 MGI:1354704
definition	codon_start : 1 product : F-box and leucine-rich repeat protein 17 isoform 3 protein_id : XP_930228.2

name	EG620725 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:620725
definition	number : 1 pseudo : _no_value

name	LOC433129 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268778 GeneID:433129
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : similar to Obox6 protein pseudo : _no_value transcript_id : XR_034674.1

name	LOC100043560 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268779 GeneID:100043560
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 85 mRNAs, 1467 ESTs, 27 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_034681.1

clone name	MSMg01-320H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315O06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-545I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313G03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-372D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306M15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-536H05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-157B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519K05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-309M13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-545D09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-060I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114F12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-350L22.b	B6Ng01-350L22.g
ACC	GA131330	GA131331
length	1,167	1,173
definition	B6Ng01-350L22.b	B6Ng01-350L22.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctcctccagtgccctttcatcttgtgctatttttgaggattaaca attggctattatgatggaaattattattttatgaaaattgtccctttctg acttccttgttgacaacaccagttttaggcaattcttatccctcagtatc taggtttcaagttgcttttcagagtactaatgtagcacattaaatattgt cttctcctgtgtggctttcaaatagcaccccttacttcacagtttctagc aactgtaaattgattaactgctgatttccattttatttctggcttcttca aggaagtacatttagggtttatcactatgtgactggcaagctttaattca ggaagattaactttggcttttgctgtcttaaatttctcaccatttattgt ttgtacttcggttgaatgtctattcaagtcagtctttctttctggctcct tcaattgttttatactttgaataggatctgaccaggacttatccttagag tgtacatgtaatatggaataatatttgttgccttttgtctctagatattt tgtgacttttaatagagtttgccccaaaatttaaaagactatttctttaa tataatgacttattgatactgatagttattttgttatttttacattttta ttatatttggcataaaaatgttgtcttgctgtgtgacattttaatctaaa tccatccattttgactttttgttcttttaggaggactgcatttggcagtg taaattaaaatgatgtaatttatagatttatatttaaagtccataccaga ctatcaaaattgcaggtggacacagtttggtaagggaatataaaaaaatt aatctagaggtcatctgaaagcttcattgtgccaggataatgctatgtag ctagaagaggaaagacatcaacattcttaaaacaaaaatcttatccagct gtgactcctgtgggctctatactgatcttccagggagatattctcatgtg atacagcattgtctagtatcatgctagtatcaacacatgaaattggtgag tctatacgagagacatcagcagttctctatctgacgagacttgttgttgg aattatagtcctaagtaggatatgcgttgtagtgcaatagtgactgaatg caaaccggccttctaaa	gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagaagccccaactggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaaactggaaagaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc taggatacccacgatataagatacaatttcctaaacacatgaaactcaag aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga aaggatggaccatgtagagactgccatatccagggatccaccccataatc agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc aatggaggagctagagaaagtaccagagctaaaggatcttcaccctatag tgacacattatgactaacagtacccctgagctctgactctagctgcatat gtatcaaagattgactagtccgtcatcactgcaaagagagtcatgaactc gcagacctttggtgtgctagtaagaacgcagttcaagggggggaattggg tgccatagggaatacttccctgc
quality values	Open. Hide. 58 29 23 26 58 58 58 58 58 58 62 38 22 62 62 62 62 62 62 62 46 36 31 31 62 62 62 56 62 56 37 49 47 56 54 62 62 62 62 59 62 62 62 59 43 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 42 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 43 49 58 58 58 58 58 58 58 58 58 58 54 58 58 52 58 54 58 58 58 58 54 58 58 48 58 58 58 58 54 58 54 58 52 58 53 54 58 58 58 44 31 31 38 41 48 58 48 46 58 53 51 58 58 58 50 58 40 58 58 54 58 54 58 58 58 49 50 51 52 51 52 50 48 41 58 58 49 54 51 51 49 58 58 41 49 53 53 58 58 58 49 54 58 51 51 51 41 58 58 58 58 43 51 51 52 58 58 58 54 52 50 26 50 58 58 58 51 52 39 39 58 53 58 53 58 58 58 39 41 49 53 51 58 58 58 23 40 58 39 58 58 45 53 53 54 51 37 54 54 53 54 53 51 38 35 39 50 54 54 41 35 39 45 53 41 25 54 49 49 44 37 30 53 44 44 32 51 49 49 54 42 52 33 54 54 54 54 46 47 37 38 42 37 54 54 40 32 34 40 53 23 53 31 27 45 46 27 31 37 36 51 35 46 29 32 31 32 52 40 40 52 32 32 52 32 51 51 32 34 52 39 32 53 32 31 45 32 53 51 32 42 36 32 37 28 53 53 45 43 30 29 51 45 31 51 42 31 32 26 25 22 41 31 26 25 23 34 34 24 31 31 31 36 32 51 51 39 30 37 31 29 15 22 23 15 46 30 30 21 20 22 25 38 28 47 31 42 46 36 32 36 31 47 30 35 35 30 28 31 32 48 46 47 46 48 29 32 38 30 31 31 31 36 31 30 41 24 39 25 32 27 37 31 30 31 37 44 38 24 29 30 34 33 18 33 24 32 26 31 24 28 14 16 20 31 18 33 24 27 41 33 31 33 31 36 33 31 23 31 42 34 31 26 30 23 44 18 21 33 48 33 26 24 13 12 37 38 22 15 25 16 38 34 34 19 31 31 44 36 33 34 33 36 44 48 23 32 32 12 20 15 24 17 24 31 32 32 34 32 16 20 21 18 33 17 22 32 37 23 24 43 18 31 34 20 29 8 20 21 20 27 32 22 29 30 20 20 13 12 14 11 37 18 6 5 7 10 16 19 22 7 5 6 4 4 28 16 15 28 10 16 6 11 17 16 17 22 19 11 5 8 8 3 5 10 16 13 27 21 14 23 26 27 26 15 11 24 8 10 25 18 9 10 20 6 31 8 11 47 18 9 7 12 12 3 3 5 6 19 25 6 8 19 6 6 5 16 7 22 18 5 4 18 6 11 10 9 3 3 13 14 8 7 7 16 6 5 2 5 11 20 23 13 7 18 6 20 12 14 9 10 7 5 16 16 6 12 8 6 6 15 8 4 4 12 11 12 16 16 8 5 9 3 3 6 23 14 3 3 3 2 6 6 3 6 14 1 3 2 3 2 2 1 2 8 5 23 6 4 2 2 1 7 18 14 8 5 5 3 4 18 20 5 5 4 1 2 7 5 4 4 5 7 19 6	Open. Hide. 62 47 42 47 62 62 62 47 51 62 56 38 38 29 22 49 46 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 54 62 62 62 62 62 59 54 54 62 59 62 54 62 62 62 62 49 54 62 62 62 62 62 62 62 62 59 62 62 59 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 42 54 62 62 62 62 62 62 62 59 59 59 62 62 54 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 49 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 34 34 46 38 62 62 62 62 62 62 62 62 62 62 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 58 58 58 58 58 58 54 54 58 58 58 58 58 58 54 58 58 58 58 54 58 58 58 58 58 54 58 54 42 58 58 58 54 58 58 54 58 58 58 58 58 54 58 54 52 54 58 54 58 58 50 58 58 58 58 58 47 42 58 58 46 41 58 58 58 58 58 40 58 58 49 51 58 58 52 54 53 53 51 54 54 52 54 58 58 38 45 50 51 58 50 50 58 50 58 58 58 51 58 50 58 51 58 58 58 51 48 58 58 49 51 49 58 41 54 54 58 58 54 50 49 58 58 54 50 54 58 58 51 50 49 58 50 52 58 58 47 40 50 48 51 58 50 49 58 54 50 51 44 44 42 41 49 54 39 58 38 31 49 40 46 50 50 49 50 51 40 52 51 50 58 52 51 30 41 49 50 51 54 58 51 42 53 39 33 54 50 44 32 50 40 54 54 54 54 54 40 51 42 52 54 53 49 49 49 54 35 39 52 51 51 39 40 26 50 51 40 52 40 53 53 33 54 49 34 40 37 42 47 47 51 52 40 39 33 31 34 32 37 30 42 45 39 34 32 25 53 52 49 39 54 35 32 29 52 51 40 40 40 33 44 38 31 34 40 40 40 37 12 33 47 27 32 47 33 40 31 32 52 53 52 52 35 53 51 31 40 32 32 37 41 47 29 32 52 32 46 13 35 33 36 31 51 45 31 42 30 26 31 30 30 19 43 31 31 45 31 32 31 31 31 31 30 31 45 25 32 23 43 31 42 23 32 25 30 51 46 27 31 24 25 21 25 40 41 31 30 35 31 32 30 32 38 36 29 42 37 25 31 31 46 31 31 43 25 31 31 31 18 24 23 29 24 30 32 31 27 24 35 35 30 20 30 37 43 35 31 27 25 38 32 20 46 46 30 22 31 32 38 31 48 22 18 20 30 15 31 27 32 21 30 31 31 34 31 30 23 37 34 26 27 38 32 18 31 26 18 26 31 22 33 22 32 24 30 22 9 36 11 26 36 38 13 12 14 32 32 11 26 25 36 31 19 18 29 24 28 19 30 22 28 17 19 15 16 29 23 32 32 22 24 22 20 32 34 25 17 21 28 12 11 23 21 25 9 15 26 25 14 27 21 17 13 20 18 43 26 7 31 16 32 12 7 11 17 18 25 7 5 11 25 16 32 33 17 23 31 24 28 43 26 11 27 27 23 3 5 5 3 8 26 28 10 30 15 7 12 3 9 24 15 20 9 9 6 18 21 27 14 13 7 24 7 3 3 5 10 4 9 17 9 28 28 16 30 8 22 13 14 12 7 13 15 20 27 28 24 17 16 22 20 6 13 17 6 17 14 20 9 15 7 15 13 16 20 15 10 23 9 16 16 16 15 11 10 22 16 25 28 17 8 11 8 4 3 2 2 18 20 4 3 4 5 5 1 6 12 18 7 7 10 11 3 3 5 22 7 5 9 3 3 2 1 3 5 3 2 2 5 3 5 8 5 14 8 7 13 7 5 20 22 19 8 5 4 4 3 5 16 1 1 3 2 1 1 5 2 2 6 4 7 2 3 1 1 7 8 17 11 29 30 28 18 4 4 17 5 12 5 6 4 5 3 2 1 1 1 4 12 7 15 10 1 2 1 2 1 2 3 1 2 4 6 5 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_62440169_62441377
seq2: B6Ng01-350L22.b_47_1213 (reverse)

seq1  TTTAGAAGGCAGTTTGGCTATCAGACCACTTATTACAACCAAACAACAGC  50
      |||||||||| | || ||  ||||  ||| |||| ||     ||||| ||
seq2  TTTAGAAGGCCGGTTTGCATTCAG-TCAC-TATTGCA---CTACAAC-GC  44

seq1  AATTAATTCCCTACTAGGGACTATAAAATCCCCAACCACAAGTTCTTCGT  100
           ||  ||||||  |||||||||     ||||| ||||||   ||||
seq2  -----ATATCCTACTTAGGACTATAA---TTCCAACAACAAGT--CTCGT  84

seq1  CAGATTTAGAGAACCTGGCCTGATTGTCCTCTTCTGTAATAGGACTCCAA  150
      ||||  ||||||| |||  |||| ||||    |||   ||| |||||   
seq2  CAGA--TAGAGAA-CTG--CTGA-TGTC----TCTCGTATA-GACTC---  120

seq1  CCCAATTTCAATGTGTTTGATTACTAGCATGATACTTAAGACAATGCTGT  200
       |||||||| ||||| |||| |||||||||||||||  ||||||||||| 
seq2  ACCAATTTC-ATGTG-TTGA-TACTAGCATGATACT--AGACAATGCTG-  164

seq1  TATCACATTGGAAGAAATATCTTCCCTGGAAGATCAGTATAAGAGCCCAC  250
      ||||||||  |    |||||| |||||||||||||||||| |||||||||
seq2  TATCACATGAG----AATATC-TCCCTGGAAGATCAGTAT-AGAGCCCAC  208

seq1  AGGAGTCACAGCTGGATAAGATTTTTGTTTTAAGAATGTTGATGTCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTCACAGCTGGATAAGATTTTTGTTTTAAGAATGTTGATGTCTTTC  258

seq1  CTCTTCTAGCTACATAGCATTATCCTGGCACAATGAAGCTTTCAGATGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTAGCTACATAGCATTATCCTGGCACAATGAAGCTTTCAGATGAC  308

seq1  CTCTAGATTAATTTTTTTATATTCCCTTACCAAACTGTGTCCACCTGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGATTAATTTTTTTATATTCCCTTACCAAACTGTGTCCACCTGCAA  358

seq1  TTTTGATAGTCTGGTATGGACTTTAAATATAAATCTATAAATTACATCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATAGTCTGGTATGGACTTTAAATATAAATCTATAAATTACATCAT  408

seq1  TTTAATTTACACTGCCAAATGCAGTCCTCCTAAAAGAACAAAAAGTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTACACTGCCAAATGCAGTCCTCCTAAAAGAACAAAAAGTCAAA  458

seq1  ATGGATGGATTTAGATTAAAATGTCACACAGCAAGACAACATTTTTATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGGATTTAGATTAAAATGTCACACAGCAAGACAACATTTTTATGC  508

seq1  CAAATATAATAAAAATGTAAAAATAACAAAATAACTATCAGTATCAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATAATAAAAATGTAAAAATAACAAAATAACTATCAGTATCAATAA  558

seq1  GTCATTATATTAAAGAAATAGTCTTTTAAATTTTGGGGCAAACTCTATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTATATTAAAGAAATAGTCTTTTAAATTTTGGGGCAAACTCTATTA  608

seq1  AAAGTCACAAAATATCTAGAGACAAAAGGCAACAAATATTATTCCATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCACAAAATATCTAGAGACAAAAGGCAACAAATATTATTCCATATT  658

seq1  ACATGTACACTCTAAGGATAAGTCCTGGTCAGATCCTATTCAAAGTATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTACACTCTAAGGATAAGTCCTGGTCAGATCCTATTCAAAGTATAA  708

seq1  AACAATTGAAGGAGCCAGAAAGAAAGACTGACTTGAATAGACATTCAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTGAAGGAGCCAGAAAGAAAGACTGACTTGAATAGACATTCAACC  758

seq1  GAAGTACAAACAATAAATGGTGAGAAATTTAAGACAGCAAAAGCCAAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACAAACAATAAATGGTGAGAAATTTAAGACAGCAAAAGCCAAAGT  808

seq1  TAATCTTCCTGAATTAAAGCTTGCCAGTCACATAGTGATAAACCCTAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTCCTGAATTAAAGCTTGCCAGTCACATAGTGATAAACCCTAAAT  858

seq1  GTACTTCCTTGAAGAAGCCAGAAATAAAATGGAAATCAGCAGTTAATCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTCCTTGAAGAAGCCAGAAATAAAATGGAAATCAGCAGTTAATCAA  908

seq1  TTTACAGTTGCTAGAAACTGTGAAGTAAGGGGTGCTATTTGAAAGCCACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGTTGCTAGAAACTGTGAAGTAAGGGGTGCTATTTGAAAGCCACA  958

seq1  CAGGAGAAGACAATATTTAATGTGCTACATTAGTACTCTGAAAAGCAACT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAAGACAATATTTAATGTGCTACATTAGTACTCTGAAAAGCAACT  1008

seq1  TGAAACCTAGATACTGAGGGATAAGAATTGCCTAAAACTGGTGTTGTCAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCTAGATACTGAGGGATAAGAATTGCCTAAAACTGGTGTTGTCAA  1058

seq1  CAAGGAAGTCAGAAAGGGACAATTTTCATAAAATAATAATTTCCATCATA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAGTCAGAAAGGGACAATTTTCATAAAATAATAATTTCCATCATA  1108

seq1  ATAGCCAATTGTTAATCCTCAAAAATAGCACAAGATGAAAGGGCACTGGA  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAATTGTTAATCCTCAAAAATAGCACAAGATGAAAGGGCACTGGA  1158

seq1  GGAGAATTC  1209
      |||||||||
seq2  GGAGAATTC  1167

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information