Query= MSMg01no046_h15.b1 MSMg01no046_h15.b1 CHROMAT_FILE:
MSMg01no046_h15.b1 PHD_FILE: MSMg01no046_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:38 2005
(430 letters)
>mm_chr17_73573836_73574665
Length = 830
Score = 567 bits (293), Expect = e-166
Identities = 312/323 (96%), Gaps = 9/323 (2%)
Strand = Plus / Minus
Query: 105 catcactccctggttttcatttatctatctatatagatatacctacctgatatgagcaca 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 catcactccctggttttcatttatctatctatatagatatacctacctgatatgagcaca 771
Query: 165 ctgttgctgttttcagacacaccagaagagggtactggatcccatttggttgtgagccac 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 ctgttgctgttttcagacacaccagaagagggtactggatcccatttggttgtgagccac 711
Query: 225 cctgtggttgctgggaactgaactcaggacctctggaagagcagtcagtgctcttaacct 284
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 cctgtggttgctgggatttgaactcaggacctctggaagagcagtcagtgctcttaacct 651
Query: 285 ctgagccatctctccagcccctctttctc---agtgtctttctctgcctagtccctgtcc 341
|||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 650 ctgagccatctctccagccc------ctcaaaagtgtctttctctgcctagtccctgtcc 597
Query: 342 ttttaacttgggtttctagcatggcagatttcagagaatagctcctcagggcagaaagca 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ttttaacttgggtttctagcatggcagatttcagagaatagctcctcagggcagaaagca 537
Query: 402 ggaaatggggaagggggtggggg 424
|||||||||||||||||||||||
Sbjct: 536 ggaaatggggaagggggtggggg 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_h15.g1 MSMg01no046_h15.g1 CHROMAT_FILE:
MSMg01no046_h15.g1 PHD_FILE: MSMg01no046_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:39 2005
(610 letters)
>mm_chr17_73545638_73546646
Length = 1009
Score = 1087 bits (562), Expect = 0.0
Identities = 598/610 (98%), Gaps = 1/610 (0%)
Strand = Plus / Plus
Query: 1 actgtgtacactaagctggtcatgaactcctgtaaatctgcctgtctctgcctcccgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtgtacactaagctggtcatgaactcctgtaaatctgcctgtctctgcctcccgaat 260
Query: 61 tctgtgattgaaggtatcaccatcatgcctggtcataagtgttatttttgtacaagaaat 120
||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 261 tctgtgattgaaggtgtcaccatcatacctggtcataagtgttatttttgtacaagaagt 320
Query: 121 gtttaatgtttttccttagcttttaccttatggctcctaacagtctatttttttttgtct 180
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 321 gcttaatgtttttccttagcttttaccttatggctcctaacagtctattcttttt-gtct 379
Query: 181 agaaaataataaggctaggagtaatgattttgctgagaagaacggacttcagaaatatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agaaaataataaggctaggagtaatgattttgctgagaagaacggacttcagaaatatga 439
Query: 241 gtatgttttacacccaagaaccactggctttacttttgtggtggaccgcctaagagaagg 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 440 gtatgttttacacccaagaaccactggctttacctttgtggtggaccgcctaagagaagg 499
Query: 301 taagttctgatcttaaaatgtgtggtttgaaataaatgtgacacaaatcgctgagctgta 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taagttctgatcttaaaatgtgtggtttgaaataaatgtgacacaaatcgctgagctgtg 559
Query: 361 tatgtatatctgacgtgtagtgagccatataaatccaatgacctgtgacaaatagtcacc 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 560 tatgtatatctgacgtgtagtgagccatatgaatccaatgacctgtgacaaatagtcacc 619
Query: 421 ttcctcttctaaatgtttcatgtcataaaattgcctgtgcctaacatgaaaggccttgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcctcttctaaatgtttcatgtcataaaattgcctgtgcctaacatgaaaggccttgaa 679
Query: 481 acctcaagtaagagaaggtgtctttccttaaatggcatcactgttctttgagtctgatgt 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acctcaagtaagagaaagtgtctttccttaaatggcatcactgttctttgagtctgatgt 739
Query: 541 gctttaagatacaaactataatttgctaaaatggagccttttacatcaaagtaccgtgat 600
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 740 gttttaagatacaaactataatttgctaaaatggagccttttacatcgaagtaccgtgat 799
Query: 601 tttgaagaaa 610
||||||||||
Sbjct: 800 tttgaagaaa 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1009
Length adjustment: 10
Effective length of query: 600
Effective length of database: 999
Effective search space: 599400
Effective search space used: 599400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
