Query= MSMg01no047_m21.b1 MSMg01no047_m21.b1 CHROMAT_FILE:
MSMg01no047_m21.b1 PHD_FILE: MSMg01no047_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:12 2005
(585 letters)
>mm_chr17_8431450_8432434
Length = 985
Score = 1093 bits (565), Expect = 0.0
Identities = 577/581 (99%)
Strand = Plus / Plus
Query: 5 gaattcaggccaacaggggtggtggtgcacgcctttaatctaagcactggggaagcggag 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 gaattcaggccaacaggggtggtggtgcacgcctttaatctaagcactggggaagcagag 264
Query: 65 gcagtgcgagctccaggacagacagagctacacaaaccctgtcttgaaaaaccaagaaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcagtgcgagctccaggacagacagagctacacaaaccctgtcttgaaaaaccaagaaag 324
Query: 125 aaagggaaggacggaaagaatgaaaagaaggagggaggcagggaagggagagggagagat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagggaaggacggaaagaatgaaaagaaggagggaggcagggaagggagagggagagat 384
Query: 185 tgcattcacaatctaaggaagggctgagcataggcactgggttctgtccccagaactgca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgcattcacaatctaaggaagggctgagcataggcactgggttctgtccccagaactgca 444
Query: 245 caaaactggatttgataacaggcacctgtgatccgagcactgccgaggtggaggccaaag 304
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caaaactggatttggtaacaggcacctgtgatccgagcactgccgaggtggaggccaaag 504
Query: 305 cttctgaagaaggtcaccctcagtcacacagccagctggagatcagcctagaccacgaga 364
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 505 cttctgaagaaggtcaccctcagtcacacaggcagctggagatcagcctagaccacgaga 564
Query: 365 gaccctgtctcaaaggaaacaaaatgtaacactttcccgcagaggaaagaatctggccag 424
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 565 gaccctgtctcaaaggaaacaaaatgtaacactttcccgcagaggaatgaatctggccag 624
Query: 425 ccacacgttgactcttacttgttaaaatgtttctatttgacaaggcgtaaaaaccctacg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccacacgttgactcttacttgttaaaatgtttctatttgacaaggcgtaaaaaccctacg 684
Query: 485 ggtgacaagccgagagggaaaaccaagaagaaaggcaggtgaaagaagaggtttatatct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggtgacaagccgagagggaaaaccaagaagaaaggcaggtgaaagaagaggtttatatct 744
Query: 545 caaaaaccaaggagaaatttaggggtggcgttccaagacgt 585
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caaaaaccaaggagaaatttaggggtggcgttccaagacgt 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no047_m21.g1 MSMg01no047_m21.g1 CHROMAT_FILE:
MSMg01no047_m21.g1 PHD_FILE: MSMg01no047_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:12 2005
(630 letters)
>mm_chr17_8448003_8449032
Length = 1030
Score = 1178 bits (609), Expect = 0.0
Identities = 624/629 (99%)
Strand = Plus / Minus
Query: 1 attcctgaatgataatgaaaatagaaatcgtgacagtgtgatttcaagcaaccacaccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 attcctgaatgataatgaaaatagaaatcgtgacagtgtgatttcaagcaaccacaccta 770
Query: 61 gccatgccagagtccctgccaagataaagtagattctcaccccaagcaggcgtggttctc 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 769 gccatgccagagtccctgccaagataaagtagattctcaccccaggcaggcgtggttctc 710
Query: 121 tatgtggatgggagagccagatctggtgtagaaagggaagtgggcagttcaaccacactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tatgtggatgggagagccagatctggtgtagaaagggaagtgggcagttcaaccacactc 650
Query: 181 tcactagtgcagatgttgggagagcagaggtgaagctgggggaaagaaaaggcaaagtgt 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tcactagtgcagatgtcgggagagcagaggtgaagctgggggaaagaaaaggcaaagtgt 590
Query: 241 gccccagtcatgctgtgttctggaacattctaccccatcagaacacactgcaatgcatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gccccagtcatgctgtgttctggaacattctaccccatcagaacacactgcaatgcatgg 530
Query: 301 tgctcaatgtgaaaatacccacttcacgggctttcctggtcacttctgagcctgagagca 360
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 529 cgctcaatgtgaaaatacccacgtcacgggctttcctggtcacttctgagcctgagagca 470
Query: 361 aacactgggggctctttctcagtgacagtctggcttcggtgactcggaaatggccataag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aacactgggggctctttctcagtgacagtctggcttcggtgactcggaaatggccataag 410
Query: 421 gaacacgtaaatgaactggttagcattgacagttaattgccagtttgtaatctttggcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gaacacgtaaatgaactggttagcattgacagttaattgccagtttgtaatctttggcct 350
Query: 481 aagaaaagtcatatcaagaaaaaaaatgatctgcataggtcttcacccaaaattccagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aagaaaagtcatatcaagaaaaaaaatgatctgcataggtcttcacccaaaattccagtt 290
Query: 541 aattgtatatgagaaaatctcacagaacaaaaatctatctgtgctagctatctagatgtg 600
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 289 aattgtatatgagaaaatctcacagaacaaaaatctatctgcgctagctatctagatgtg 230
Query: 601 gattaaagcccatgattcaaagactggag 629
|||||||||||||||||||||||||||||
Sbjct: 229 gattaaagcccatgattcaaagactggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
