XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
GAGTTCAGTGCTGCCTCTGAAACTGCATATAAAGGATGTGAAGCCCAACA
ATGAGAGGATGTCAATAAGAAGATTATAAATTGGATGCTCACAGTCATCC
ATTAGATGGAGCACAGAGTCCACAATGAAGAAGCTAGAGAAAGTACCCAA
AGAAATGAAGGGGTTTTCAGCCCCCTAGGAGAAACAACAATATGAACTAA
CCAGTAACCCAAGAGTTCCCTAGGACTAAACCACCAATTGAAGACAACAC
ACAGAGAGACTCATGGCTCTAGCTGCATATGTAGCTGAGGATGGCCTAGT
TGATCATCAAGGGGAAAAGAGGCCCTTCGTCCTGTGAAGATTCCATTCCA
CAGTATAGGTGAATGCCTGGGCCAGGAAGCAGGAGTAGGTGGGTTGGGGA
GCAGGAGGAGGGGGGATAGAATAGGGGATTTTCCCCCTCTCCTTTTACCC
ACCTTATTTTATCCTTTTCCCATTACCACCTTTCCTTTATTTTCCCTTAC
CCTTTCTTCCTCTTTCTCCCCTCCCCGTTTATGTTTTTGCTTACTTACCG
CAGCCACCCATTCCCCCACTCATTTGCTCCCCTCACCCCCCCCCCTTTTT
TCCTCCTTTTTTTTTCCCTCCCCCCCCCGCTATCCCCCTTCTATCCTTAC
GTATTCCCCCCCTTTTTCCCT

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCTATTTTTCTGTTACATTTGTTTTCTAATAA
GGCTTTGAAATGAAAATTCTCTTTGAAGCCTATTTATAAATCAAACTTCA
CTTTTAGCCATGCACTTAATGATATATTTACATAGGGTTATTAATAAGAT
TTTGGTAGATAATGACTAGTTACTCATTTCTCAAAGGTGAGTGAATCTGT
TATTGGAGATAGCAATCGAAAGAGCAGACAAGAGAATCAGGAAAGACAAT
GCTGACACACTGAACTTGTAATTTATAATGAAAGAAAATTATTTAGGATG
TATATTATTAAGTAGCATCACTTTAAATATATATTGGCTAGTGTGCTCAA
GGAACCCCCAAAAGCTAATAAATTATGTAATTCAGTTTTTTTGTATAATA
TGAGACAATGGGGCATATAAGCTATATGGTAACACTTGAAGATAATAAAT
CATAACTTGTCCCTACATACTTTCAAATAAAACCAGCTAATCTAAATTAT
GCAGATATATATAAAGAAAAAAATAAGCACGAATATTACCTGTCTAGATT
TTGACATTTTCTGTTTACAATCTCAGGTAAATCTATAGTTATTAGAAGTA
AGAATGTAAGCAGAATAATTCAAAAAAATATTGAGCATGTGCCAAAGTAA
GAA

Query= MSMg01no052_n13.g1 MSMg01no052_n13.g1 CHROMAT_FILE:
MSMg01no052_n13.g1 PHD_FILE: MSMg01no052_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:35 2005
         (625 letters)



>mm_chr17_77581779_77582806
          Length = 1028

 Score = 1098 bits (568), Expect = 0.0
 Identities = 613/630 (97%), Gaps = 7/630 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctatttttctgttacatttgttttctaataaggctttgaaatgaaaattctctttgaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 tctatttttctgttacatttgttttctaataaggctttgaaatgaaaattctctttgaag 769

                                                                       
Query: 61  cctatttataaatcaaacttcacttttagccatgcacttaatgatatatttacatagggt 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 768 cctatttataaatcaaacttcacttttagccatgcatttaatgatatatttacatagggt 709

                                                                       
Query: 121 tattaataagattttggtagataatgactagttactcatttctcaaaggtgagtgaatct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tattaataagattttggtagataatgactagttactcatttctcaaaggtgagtgaatct 649

                                                                       
Query: 181 gttattggagatagcaatcgaaagagcagacaagagaatcaggaaagacaatgctgacac 240
           ||||||||||||||||||||||| ||||||  ||| ||||||||||||||||||||||||
Sbjct: 648 gttattggagatagcaatcgaaaaagcagatgagaaaatcaggaaagacaatgctgacac 589

                                                                       
Query: 241 actgaacttgtaatttataatgaaagaaaattatttaggatgtatattattaagtagcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 actgaacttgtaatttataatgaaagaaaattatttaggatgtatattattaagtagcat 529

                                                                       
Query: 301 cactttaaatatatattggctagtgtgctcaaggaaccccc-aaaagctaataaattatg 359
           ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 528 cactttaaatatatattggttagtgtgctcaaggaaccccccaaaagctaataaattatg 469

                                                                       
Query: 360 taattcagttttttt---gtataatatgagacaatggggcatataagctatatggtaaca 416
           |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 taattcagttttttttttgtataatatgagacaatggggcatataagctatatggtaaca 409

                                                                       
Query: 417 cttgaagataataaatcataacttgtccctacatactttcaaataaaaccagctaatcta 476
           |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 408 cttgaagataataaatcataacttgtccctacatactttcaaataagatcagctaatcta 349

                                                                       
Query: 477 aattatgcagatatatataaagaaaaaaataagcacgaatattacctgtctagattttga 536
           |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||
Sbjct: 348 aattatgcagatatatataaagaaaaaaa--agcatgaatattacctgtctagattttga 291

                                                                       
Query: 537 cattttctgtttacaatctcaggtaaatctatagttattagaagtaagaatgtaagcaga 596
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 290 cattttctgtttacaatctcaggtaaatctatagttattagaagtaagagtgtaagcaga 231

                                         
Query: 597 ataattcaaaaaaa-tattgagcatgtgcc 625
           |||||||||||||| |||||||||||||||
Sbjct: 230 ataattcaaaaaaaatattgagcatgtgcc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1028
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1018
Effective search space:   626070
Effective search space used:   626070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)