Query= MSMg01no053_b24.b1 MSMg01no053_b24.b1 CHROMAT_FILE:
MSMg01no053_b24.b1 PHD_FILE: MSMg01no053_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:57 2005
(504 letters)
>mm_chr6_71495231_71496134
Length = 904
Score = 924 bits (478), Expect = 0.0
Identities = 493/498 (98%), Gaps = 1/498 (0%)
Strand = Plus / Minus
Query: 4 ggaattcactttgtataccacggctggcctcaaactcagaaatctgcctgcctctgcctc 63
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ggaattcactttgtagacca-ggctggcctcaaactcagaaatctgcctgcctctgcctc 737
Query: 64 ccgagtgctgggattaaaggtgtgcgccaccacgcgcccagacattcttgctaaattagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ccgagtgctgggattaaaggtgtgcgccaccacgcgcccagacattcttgctaaattagt 677
Query: 124 ttaacttggatctcatcaagtttacatccaacttccatttcacataaaatgacacaccgg 183
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 676 ttaacttggatctcatcaagtttacatccaacttccatttcacataaaataacacaccgg 617
Query: 184 aaaaagttaagggcaagacacagaccttgcaggatgatgaacagccaactctaaagtctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aaaaagttaagggcaagacacagaccttgcaggatgatgaacagccaactctaaagtctt 557
Query: 244 tacttttacaatgttactttcatttttaatgcggggattaaatttttaaaacgaatgcat 303
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 556 tacttttacaatgttactttcatttttaatgtggggattaaatttttaaaacgaatgcat 497
Query: 304 ggtaatgtctcagaaactacaacacccagactttcccgaaaaatctttgctttctgagcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ggtaatgtctcagaaactacaacacccagactttcccgaaaaatctttgctttctgagcc 437
Query: 364 actgtctagtctgcccttgaactcttgctttcaggaatgtcctgaaaatgaccaagcagc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 actgtctagtctgcccttgaactcttgctttcaggaatgtcctgaaaatgaccaagcagc 377
Query: 424 tgaactgcaggccacactgcatctcttaaaaccttttcttattaagaactttcatttacc 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 376 tgaactgcaggccacactgcatctcttaaaaccttttcttattaagaactttcattcacc 317
Query: 484 tgttacattttgctctct 501
||||||||||||||||||
Sbjct: 316 tgttacattttgctctct 299
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_b24.g1 MSMg01no053_b24.g1 CHROMAT_FILE:
MSMg01no053_b24.g1 PHD_FILE: MSMg01no053_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:57 2005
(192 letters)
>mm_chr17_84890214_84890805
Length = 592
Score = 348 bits (180), Expect = e-100
Identities = 189/192 (98%)
Strand = Plus / Plus
Query: 1 tgtgctagcagcattttatgaaggttgggtgacatgctataagctggtccacggaagagt 60
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 201 tgtgctagcagcattttatgaaggttgggtgacatgctacaagctgatccacggaagagt 260
Query: 61 ggaacactgatctcttccgcacaaactccatccccagagccacaaagaagcgggtgcagt 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaacactcatctcttccgcacaaactccatccccagagccacaaagaagcgggtgcagt 320
Query: 121 atgtttgaacctctagaaatgggaactaagtaaacttctttttaaaaacattattcaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtttgaacctctagaaatgggaactaagtaaacttctttttaaaaacattattcaccc 380
Query: 181 ttgtgtattttg 192
||||||||||||
Sbjct: 381 ttgtgtattttg 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 592
Length adjustment: 8
Effective length of query: 184
Effective length of database: 584
Effective search space: 107456
Effective search space used: 107456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
