Query= MSMg01no053_j17.b1 MSMg01no053_j17.b1 CHROMAT_FILE:
MSMg01no053_j17.b1 PHD_FILE: MSMg01no053_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:34 2005
(314 letters)
>mm_chr1_117972782_117973496
Length = 715
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%), Gaps = 1/312 (0%)
Strand = Plus / Plus
Query: 1 gtcttctatgggactccttaactatcaattctgggtctgttctgtaagaaatggtgaccc 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtcttctatgggactccttaactgtcaattctgggtctgttctgtaagaaatggtgaccc 260
Query: 61 tcacttcagaaaagcactggagactcagggtaggcaaagcaaaaccatttatcttactac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacttcagaaaagcactggagactcagggtaggcaaagcaaaaccatttatcttactac 320
Query: 121 cttgcaaaactattgtcagctcagaatgacagacgcactgac-tgagagcagagagcagt 179
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 cttgcaaaactattgtcagctcagaatgacagacgcactgacatgagagcagagagcagt 380
Query: 180 ttctagaaacagaacaaaaaccttctctttcttctttccctcccttcctttctcattggc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctagaaacagaacaaaaaccttctctttcttctttccctcccttcctttctcattggc 440
Query: 240 taaggagccaggagcatatattcttacacattatctaggtcttatttttccctgtcatat 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaggagtcaggagcatatattcttacacattatctaggtcttatttttccctgtcatat 500
Query: 300 atggccatcttt 311
|| |||||||||
Sbjct: 501 atagccatcttt 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_j17.g1 MSMg01no053_j17.g1 CHROMAT_FILE:
MSMg01no053_j17.g1 PHD_FILE: MSMg01no053_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:34 2005
(175 letters)
>mm_chr17_63607459_63608033
Length = 575
Score = 317 bits (164), Expect = 2e-91
Identities = 170/172 (98%)
Strand = Plus / Plus
Query: 1 tctgctggccggaccctaggctgctgtgggaaaggctacaggaacatggctgtaagtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgctggccggaccctaggctgctgtgggaaaggctacaggaacatggctgtaagtgaa 260
Query: 61 gaccactatttcaggacactggtatactgcctgcctcctttgctgtttttatctaaaggg 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 gaccactatttcaggacactggtatactgcctgcctcctttgctgtttttctctaaaggg 320
Query: 121 gactgtactggctagttttctgtcaacttgacacagctggggttatcacaga 172
|| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattgtactggctagttttctgtcaacttgacacagctggggttatcacaga 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 575
Length adjustment: 8
Effective length of query: 167
Effective length of database: 567
Effective search space: 94689
Effective search space used: 94689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
