Query= MSMg01no062_o16.b1 MSMg01no062_o16.b1 CHROMAT_FILE:
MSMg01no062_o16.b1 PHD_FILE: MSMg01no062_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:01 2005
(264 letters)
>mm_chr17_46935520_46936183
Length = 664
Score = 511 bits (264), Expect = e-149
Identities = 264/264 (100%)
Strand = Plus / Minus
Query: 1 tctcctgtgtgtcaggttacagggcttctcaccatgacattagtcccacacaaggagagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tctcctgtgtgtcaggttacagggcttctcaccatgacattagtcccacacaaggagagc 306
Query: 61 ctactgtaccaaaatgaaacttgtaaatttttgtgtccttgtatgtaagtttacttttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctactgtaccaaaatgaaacttgtaaatttttgtgtccttgtatgtaagtttacttttta 246
Query: 121 tggaggaaagactctagataatgacaaatgaagattacaaagtgtattttactcctgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tggaggaaagactctagataatgacaaatgaagattacaaagtgtattttactcctgtga 186
Query: 181 ttaggttacaccacatgggtcataactcactcccgagcccccactgctgaagggaagcgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ttaggttacaccacatgggtcataactcactcccgagcccccactgctgaagggaagcgc 126
Query: 241 tctgcctcagtggccaacgttggt 264
||||||||||||||||||||||||
Sbjct: 125 tctgcctcagtggccaacgttggt 102
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 664
Length adjustment: 9
Effective length of query: 255
Effective length of database: 655
Effective search space: 167025
Effective search space used: 167025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no062_o16.g1 MSMg01no062_o16.g1 CHROMAT_FILE:
MSMg01no062_o16.g1 PHD_FILE: MSMg01no062_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:01 2005
(455 letters)
>mm_chr17_46783930_46784783
Length = 854
Score = 804 bits (416), Expect = 0.0
Identities = 446/456 (97%), Gaps = 3/456 (0%)
Strand = Plus / Plus
Query: 1 aagatgatgccagggagaccatctccttggagaattatatcagaggtttaccaagtgatt 60
||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagatgatgaaagggagaccatttccttggagaattatatcagaggtttaccaagtgatt 260
Query: 61 accaagtaactggataaacacattacactggtatttgtgaaggttggagattagggggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accaagtaactggataaacacattacactggtatttgtgaaggttggagattagggggca 320
Query: 121 gcgttctgagatgtttctgggaagctaaacttagtctatgtgctttcttgcttggttctc 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 gcgttctgagatgtttctgggaagctaaacttagtctaggtgctttcttgcttggttctc 380
Query: 181 taaaagagaatatttcctttaatccctagatacagagcaatgtcctccttcagctgcccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaagagaatatttcctttaatccctagatacagagcaatgtcctccttcagctgcccc 440
Query: 241 atgccttggtgtcgccctcttaccgcccaatgcatatgtttgcggaccgcagtgccaagt 300
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 441 ctgccttggtgtcgccctcttaccgcccagtgcatatgtctgcggaccgcagtgccaagt 500
Query: 301 ttgtgtcctggaagagtcgtaccaagtacacagttaaaccagtgaagatgaggaagtctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtgtcctggaagagtcgtaccaagtacacagttaaaccagtgaagatgaggaagtctg 560
Query: 361 ggggtcgagaccatacaggtgggaaaagggcctggagcattcaggaggaaagtgtgttag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggggtcgagaccatacaggtgggaaaagggcctggagcattcaggaggaaagtgtgttag 620
Query: 421 gctcctggggttttttttgttgttgtt-gttttttg 455
|||||||||||||||||| || ||||| ||||||||
Sbjct: 621 gctcctggggtttttttt-tt-ttgtttgttttttg 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 854
Length adjustment: 10
Effective length of query: 445
Effective length of database: 844
Effective search space: 375580
Effective search space used: 375580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
