MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-072H05
Chromosome	17 (Build37)
Map Location	17,400,652 - 17,401,201
singlet/doublet	singlet
Overlap gene	LOC676238
Upstream gene	LOC100041383, LOC100041394, LOC213781, LOC100041407, LOC665072, EG383211, LOC626785, LOC665085, BC002059, BC018101, Zfp97, EG382161
Downstream gene	EG626854, LOC100041965, Riok2, Lix1, LOC383297, Lnpep, EG665140, LOC100041519, EG626942, 4930546H06Rik, Has1, Fpr1, Fpr-rs2, LOC665183, LOC670250, EG665187, LOC546683, Fprl1, LOC627060, Fpr-rs4, EG637021, EG665210, Vmn2r92, EG665227
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041383 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041383
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100041394 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041394
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC213781 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:213781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 495 ESTs, 13 Proteins pseudo : _no_value

name	LOC100041407 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041407
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 85 ESTs, 8 Proteins

name	LOC665072 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	EG383211 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383211 MGI:3644871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins pseudo : _no_value

name	LOC626785 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 211 ESTs, 5 Proteins pseudo : _no_value

name	LOC665085 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 86 ESTs, 16 Proteins pseudo : _no_value

name	BC002059 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213811 MGI:2384864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC018101 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:449000 MGI:3052731
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp97 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22759 MGI:105921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG382161 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382161 MGI:3646034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 1 Protein

name	LOC676238 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG626854 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626854 MGI:3645888
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041965 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041965
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 1484 ESTs, 6 Proteins pseudo : _no_value

name	Riok2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67045 MGI:1914295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lix1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66643 MGI:1913893
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383297 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383297
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Lnpep (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240028 MGI:2387123
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665140 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665140 MGI:3643010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC100041519 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG626942 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626942 MGI:3645076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 Proteins

name	4930546H06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75202 MGI:1922452
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Has1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15116 MGI:106590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fpr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14293 MGI:107443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fpr-rs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14289 MGI:1278319
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665183 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC670250 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	EG665187 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665187 MGI:3644434
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 148 ESTs, 6 Proteins pseudo : _no_value

name	LOC546683 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Fprl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14294 MGI:1194495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627060 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627060
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	Fpr-rs4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14291 MGI:1278317
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 Proteins

name	EG637021 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:637021 MGI:3643332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins

name	EG665210 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665210 MGI:3645072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins

name	Vmn2r92 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627111
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins

name	EG665227 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665227 MGI:3648050
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins

name	LOC100041407 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268483 GeneID:100041407
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 85 ESTs, 8 Proteins product : similar to B-myb transcript_id : XM_001476338.1

name	BC002059 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703793 GeneID:213811 MGI:2384864
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC002059 transcript_id : NM_145397.1

name	BC018101 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52851394 GeneID:449000 MGI:3052731
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC018101 transcript_id : NM_001005358.1

name	Zfp97 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110815835 GeneID:22759 MGI:105921
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 97 transcript_id : NM_011765.4

name	EG382161 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268488 GeneID:382161 MGI:3646034
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 1 Protein product : predicted gene, EG382161, transcript variant 1 transcript_id : XM_356261.6

name	EG626854 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268457 GeneID:626854 MGI:3645888
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG626854 transcript_id : XM_001471565.1

name	Riok2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385427 GeneID:67045 MGI:1914295
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIO kinase 2 (yeast) transcript_id : NM_025934.1

name	Lix1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118403301 GeneID:66643 MGI:1913893
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : limb expression 1 homolog (chicken) transcript_id : NM_025681.2

name	Lnpep (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802386 GeneID:240028 MGI:2387123
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucyl/cystinyl aminopeptidase transcript_id : NM_172827.2

name	EG626942 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268496 GeneID:626942 MGI:3645076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 Proteins product : predicted gene, EG626942 transcript_id : XM_891564.2

name	4930546H06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802652 GeneID:75202 MGI:1922452
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930546H06 gene transcript_id : NM_029205.2

name	Has1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680168 GeneID:15116 MGI:106590
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hyaluronan synthase1 transcript_id : NM_008215.1

name	Fpr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71361679 GeneID:14293 MGI:107443
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : formyl peptide receptor 1 transcript_id : NM_013521.2

name	Fpr-rs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50345973 GeneID:14289 MGI:1278319
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : formyl peptide receptor, related sequence 2 transcript_id : NM_008039.2

name	LOC670250 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268571 GeneID:670250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to mitochondrial ribosomal protein L41 transcript_id : XM_001478218.1

name	Fprl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124358929 GeneID:14294 MGI:1194495
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : formyl peptide receptor-like 1 transcript_id : NM_008042.2

name	EG637021 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268498 GeneID:637021 MGI:3643332
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins product : predicted gene, EG637021 transcript_id : XM_975323.2

name	EG665210 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268502 GeneID:665210 MGI:3645072
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins product : predicted gene, EG665210 transcript_id : XM_975359.2

name	Vmn2r92 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268508 GeneID:627111
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins product : vomeronasal receptor Vmn2r92 transcript_id : XM_001476639.1

name	EG665227 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268510 GeneID:665227 MGI:3648050
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins product : predicted gene, EG665227 transcript_id : XM_975475.2

name	LOC100041407 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268484 GeneID:100041407
definition	codon_start : 1 product : similar to B-myb protein_id : XP_001476388.1

name	BC002059 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703794 GeneID:213811 MGI:2384864
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC213811 protein_id : NP_663372.1

name	BC018101 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52851395 GeneID:449000 MGI:3052731
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC449000 protein_id : NP_001005358.1

name	Zfp97 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110815836 GeneID:22759 MGI:105921
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : zinc finger protein 97 protein_id : NP_035895.2

name	EG382161 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268489 GeneID:382161 MGI:3646034
definition	codon_start : 1 product : similar to CDNA sequence BC018101 isoform 1 protein_id : XP_356261.6

name	EG626854 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268458 GeneID:626854 MGI:3645888
definition	codon_start : 1 product : similar to zinc finger protein 709 protein_id : XP_001471615.1

name	Riok2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385428 CCDS:CCDS28417.1 GeneID:67045 MGI:1914295
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : RIO kinase 2 protein_id : NP_080210.1

name	Lix1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118403302 GeneID:66643 MGI:1913893
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : limb expression 1 protein_id : NP_079957.2

name	Lnpep (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370240 GeneID:240028 MGI:2387123
definition	GO_component : GO:0005624 - membrane fraction [Evidence IMP]; GO:0005792 - microsome [Evidence IDA]; GO:0048471 - perinuclear region [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004177 - aminopeptidase activity [Evidence IMP]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0030163 - protein catabolism [Evidence IMP] codon_start : 1 product : leucyl/cystinyl aminopeptidase protein_id : NP_766415.1

name	EG626942 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268497 GeneID:626942 MGI:3645076
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_896657.2

name	4930546H06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037403 GeneID:75202 MGI:1922452
definition	codon_start : 1 product : hypothetical protein LOC75202 protein_id : NP_083481.1

name	Has1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680169 GeneID:15116 MGI:106590
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0050501 - hyaluronan synthase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] codon_start : 1 product : hyaluronan synthase1 protein_id : NP_032241.1

name	Fpr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305065 CCDS:CCDS28418.1 GeneID:14293 MGI:107443
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004982 - N-formyl peptide receptor activity [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence TAS]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : lipoxin A4 receptor product : formyl peptide receptor 1 protein_id : NP_038549.1

name	Fpr-rs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679853 CCDS:CCDS28419.1 GeneID:14289 MGI:1278319
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0004943 - C3a anaphylatoxin receptor activity [Evidence IEA]; GO:0004982 - N-formyl peptide receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IDA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA] codon_start : 1 note : lipoxin A4 receptor-like protein product : formyl peptide receptor, related sequence 2 protein_id : NP_032065.1

name	LOC670250 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268572 GeneID:670250
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478268.1

name	Fprl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124358930 CCDS:CCDS28420.1 GeneID:14294 MGI:1194495
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004943 - C3a anaphylatoxin receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004982 - N-formyl peptide receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IDA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence TAS]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : formyl peptide receptor-like 1 protein_id : NP_032068.2

name	EG637021 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268499 GeneID:637021 MGI:3643332
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_980417.2

name	EG665210 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268503 GeneID:665210 MGI:3645072
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_980453.2

name	Vmn2r92 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268509 GeneID:627111
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_001476689.1

name	EG665227 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268511 GeneID:665227 MGI:3648050
definition	codon_start : 1 product : similar to putative pheromone receptor protein_id : XP_980569.2

name	LOC100041383 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041383
definition	number : 3 pseudo : _no_value

name	LOC100041383 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041383
definition	number : 2 pseudo : _no_value

name	LOC100041383 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041383
definition	number : 1 pseudo : _no_value

name	LOC100041394 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041394
definition	number : 1 pseudo : _no_value

name	LOC100041394 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041394
definition	number : 2 pseudo : _no_value

name	LOC100041394 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041394
definition	number : 3 pseudo : _no_value

name	LOC665072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665072
definition	number : 1 pseudo : _no_value

name	LOC665072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665072
definition	number : 2 pseudo : _no_value

name	LOC665072 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665072
definition	number : 3 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 1 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 2 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 3 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 4 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 5 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 6 pseudo : _no_value

name	LOC676238 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676238
definition	number : 7 pseudo : _no_value

name	LOC383297 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383297
definition	number : 1 pseudo : _no_value

name	EG665140 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665140
definition	number : 1 pseudo : _no_value

name	EG665140 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665140
definition	number : 2 pseudo : _no_value

name	LOC100041519 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041519
definition	number : 4 pseudo : _no_value

name	LOC100041519 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041519
definition	number : 3 pseudo : _no_value

name	LOC100041519 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041519
definition	number : 2 pseudo : _no_value

name	LOC100041519 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041519
definition	number : 1 pseudo : _no_value

name	LOC665183 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665183
definition	number : 2 pseudo : _no_value

name	LOC665183 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665183
definition	number : 1 pseudo : _no_value

name	LOC546683 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:546683
definition	number : 1 pseudo : _no_value

name	LOC627060 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627060
definition	number : 1 pseudo : _no_value

name	LOC213781 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268548 GeneID:213781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 495 ESTs, 13 Proteins product : similar to ribosomal protein L7a pseudo : _no_value transcript_id : XR_033527.1

name	EG383211 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149268485 GeneID:383211 MGI:3644871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins product : predicted gene, EG383211 pseudo : _no_value transcript_id : XR_001688.2

name	LOC626785 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268553 GeneID:626785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 211 ESTs, 5 Proteins product : similar to Lysosomal-associated protein transmembrane 4B pseudo : _no_value transcript_id : XR_033531.1

name	LOC665085 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268486 GeneID:665085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 86 ESTs, 16 Proteins product : similar to cyclin B pseudo : _no_value transcript_id : XR_032712.1

name	LOC100041965 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268563 GeneID:100041965
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 mRNAs, 1484 ESTs, 6 Proteins product : similar to ornithine decarboxylase antizyme pseudo : _no_value transcript_id : XR_033561.1

name	EG665187 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149268568 GeneID:665187 MGI:3644434
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 148 ESTs, 6 Proteins product : predicted gene, EG665187 pseudo : _no_value transcript_id : XR_001702.2

name	Fpr-rs4 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149268573 GeneID:14291 MGI:1278317
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 Proteins product : formyl peptide receptor, related sequence 4 transcript_id : XR_035345.1

clone name	MSMg01-105G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411F01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-379G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045H22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-279G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360G08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-296M08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-296N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143F14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-234O05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-494F06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-072H05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-198A12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-515F20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-417A16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-449I17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-306J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291A03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-277L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422N20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-532J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356J01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-145F02
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-224G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272C05
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-072H05.T7 (MSMg01no072_h05.b1)	MSMg01-072H05.TJ (MSMg01no072_h05.g1)
ACC	AG295991	AG295992
length	690	693
length of high quality (start - end)	554 (45 - 598)	473 (76 - 548)
definition	CHROMAT_FILE: MSMg01no072_h05.b1 PHD_FILE: MSMg01no072_h05.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:20:12 2005	CHROMAT_FILE: MSMg01no072_h05.g1 PHD_FILE: MSMg01no072_h05.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:20:12 2005
singlet/doublet	singlet	---
BLAST hit	plural	no hit data
sequence	CTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGA ATTCACAACTTCTTTCTGAATACATCAAAAACCTCAGACTGCAGAAAATT CCTATGAGTATTAGTAATGTAGAAATGTTCTGTTTCTCCTGTTTAACTTC CCAAATGTTGTATGGCTCATATTATAGGAAAATTCATGAATCCAATCATT GTGGTAAAGCTGTGAATGCTTGCACATTTTGTCAAATATATGAAAAACCT CATAAAGGAAAAAGATATTGTAACTTTGGGCCATGTGATAAATGCTCTTT CCATCACTGGTAGTTTTAAAGATGTAAATAATAACCATAATGAATCAAAC CAACATGGATAAAAACAACATGACAGAACCTTATTATATCTGATTCCTCT TTACAATTAGAATACATTGTTAACCTAATCTATACAGATAAATGATTCAT TAGTATAATAAATGGGGTAAAACTTATACATGTACCAATTGCATGCACAG TCTTAAATAAAATCTTACTATAGAGAAACACTCTGAAAATATCTAATGTG TTAAATTCTATTTATATCACAGGCATCTTCAAAGGGATGGACCAAGTAAT ACTGGAGAGAAACCCTTTGGATGTATTCAATATGATGGAGCCTTTGCAAG AAACAGTTATCATCAGTTATATAAGAGCACTGTATCTTTC	ACGATACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXAATTCCAAACAGACAACTTCAAATG GCTGAGAAACACTTGAAGAAATGTTCTCCATCCTTAGCCAATATGGAAAT GCAAATAAATACTTCATTATAATTCCATAGTACACATGTCATAATGGGTA CGATCACACCAATGATTGTTCATACTTGATAAAAAGTAAGTTTACATCCA CTCTTCTGCTTGTAGGTATGCAAACTAATACAAATGTTATGGAAATCAAT ATCATGATGTCTTAGGAAAGTGGGAGTTTATATACAAGATCCATCTATAT CAGTCTTGGGAAAAACACAAAGGGAACTCCTTCCACAAAAATGAAAAGAC ACATGCTCAACTATGTACATAGCAGCTTTATTTGTACTAGCCAGAAGCTA AAGACAACTTAGATGTCTTAAAGCTAAAGAATGAAGAAAGAAAATGTGCT ATGATTATATAATGGAAGTATCACTAACCTACTAAAATAAAACAACATAT ATGAATGCTTGATTACAGGCCTATGAATGCACCTAGAAGAAATATCACAC TAAATCAGGTAATCCAAAATCCGGAATGACAGAAATGGTATATATTCAGT GATAAATGGATACTAGGCTTTAGGTAAACTATAACCAAGCTAT
quality values	Open. Hide. 8 8 8 8 9 11 15 37 37 34 33 33 33 33 33 47 35 35 30 30 30 35 43 43 28 28 28 25 23 21 21 11 11 11 17 15 9 9 7 6 6 8 8 11 15 23 30 30 30 30 31 31 36 36 36 36 38 38 26 34 21 21 21 24 12 11 11 19 25 40 48 48 40 40 47 47 68 68 68 68 68 68 54 44 44 37 37 44 48 68 68 68 68 68 68 50 48 50 50 50 50 68 68 57 57 57 43 43 57 57 57 57 47 54 47 50 50 51 50 50 42 44 32 36 36 50 50 50 51 51 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 57 57 50 50 50 57 52 57 54 57 57 57 57 57 59 59 59 57 52 43 43 43 39 45 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 52 52 52 52 57 57 57 57 57 57 57 57 57 62 62 62 62 62 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 62 62 62 62 62 62 62 62 62 52 52 52 45 52 62 62 62 62 52 52 62 62 62 62 62 62 62 62 62 62 62 62 44 43 35 44 44 44 44 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 43 39 35 35 43 43 39 43 43 52 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 62 43 39 39 35 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 34 34 11 11 11 26 33 43 62 62 62 62 62 62 43 39 43 43 47 43 45 45 57 59 59 59 59 57 57 52 45 43 43 43 52 43 43 43 57 57 52 52 52 38 38 18 28 28 44 44 59 57 57 52 52 43 43 38 27 20 20 23 41 44 52 52 52 57 57 57 59 59 52 52 43 47 35 35 32 43 28 28 28 44 43 31 29 28 32 28 43 31 38 38 43 59 57 57 48 48 43 43 32 26 13 13 20 34 44 43 39 37 42 24 32 13 17 17 30 26 32 32 37 43 42 54 48 59 42 35 35 35 44 44 57 44 44 28 28 25 36 40 37 31 37 30 32 32 39 43 59 59 68 68 53 53 50 48 48 39 28 28 14 12 12 11 11 11 18 19 37 27 42 31 22 22 24 32 23 23 25 32 23 23 22 30 29 34 28 19 13 11 11 15 19 19 19 11 11 12 11 11 11 11 13 16 27 34 32 32 31 29 19 19 17 18 11 11 11 20 25 33 30 30 30 37 24 24 16 18 15 18 20 22 24 30 28 39 37 34 26 17 14 14 13 18 21 24 16 13 15 18 23 23 37 32 32 32 35 37 39 39 33 33 36 33 33 22 24 18 19 19 23 23 13 12 12 12 19 26 20 22 16 14	Open. Hide. 6 6 6 6 8 8 8 6 8 19 19 25 22 22 33 37 37 47 47 53 57 57 53 48 48 48 50 50 47 30 25 12 9 9 9 12 12 9 10 10 12 11 11 12 18 19 37 32 33 36 36 38 38 38 57 53 53 50 33 33 17 21 24 17 19 10 12 12 16 14 24 28 33 33 33 33 33 36 36 36 36 34 34 34 39 39 39 39 39 39 39 43 42 42 36 36 36 43 59 46 43 43 42 43 43 43 43 48 48 48 50 50 50 68 57 57 48 43 36 30 30 41 41 41 50 57 57 57 54 54 54 57 57 44 44 33 32 32 42 42 57 57 57 57 48 47 47 47 47 44 57 50 41 41 41 50 50 50 57 57 57 50 57 57 52 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 57 59 52 54 52 52 52 27 27 11 11 11 27 27 43 43 52 57 57 52 52 57 57 57 59 57 59 59 57 52 52 52 52 43 57 52 45 43 57 43 52 52 52 52 57 57 57 57 57 57 57 52 43 43 39 39 43 43 57 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 35 35 62 62 62 43 39 39 43 62 62 62 62 52 52 52 38 38 24 26 26 43 43 52 52 52 62 62 62 62 52 62 62 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 62 62 62 62 59 43 35 35 39 43 43 62 62 62 62 68 62 62 62 52 52 62 62 62 62 62 62 62 62 43 52 52 62 43 43 21 21 21 43 43 43 39 31 43 43 44 43 43 43 35 35 31 43 39 35 43 31 39 39 43 44 38 29 13 13 13 38 38 62 62 62 62 62 62 62 62 62 52 45 45 62 62 44 43 31 31 35 43 44 62 43 43 35 35 35 26 43 43 44 35 35 20 16 16 22 21 27 27 27 29 44 44 57 57 57 44 43 35 35 39 32 27 14 14 14 32 38 42 42 33 33 33 42 38 35 32 32 35 35 43 43 52 38 38 20 27 20 41 41 52 57 57 43 43 32 32 24 24 22 36 22 20 20 27 38 43 43 26 21 13 13 21 24 33 33 29 29 32 43 43 43 50 42 57 44 44 48 48 57 44 44 32 32 28 35 27 36 28 28 20 27 24 42 44 26 32 11 11 11 21 21 37 44 31 25 20 21 30 31 37 36 37 28 30 30 32 28 20 20 20 14 21 11 11 11 13 23 17 19 21 25 16 22 20 23 12 10 10 10 12 13 19 19 12 12 12 11 11 15 12 17 22 19 10 10 10 11 15 12 12 12 13 12 12 11 13 16 15 15 26 30 33 33 22 23 14 14 17 18 23 20 13 15 12 12 14 28 23 22 22 22 22 25 24 20 20 18 19 23 24 21 18 12 12 25 19 22 27 27 27 25 22 27 22 25 22 22 22 27 23 15 12 12 11 10 10 10 10 13 19 15 11 11 11 12 12 12 21 18 15 13 13 14 22 19 12 10 10 13 12 12 14 16 13 17 15 12 9 9 9 9 8 11 11 11 13 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no072_h05.b1 MSMg01no072_h05.b1 CHROMAT_FILE:
MSMg01no072_h05.b1 PHD_FILE: MSMg01no072_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:12 2005
         (554 letters)



>mm_chr17_17400448_17401401
          Length = 954

 Score =  878 bits (454), Expect = 0.0
 Identities = 526/550 (95%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacaacttctttctgaatacatcaaaaacctcagactgcagaaaattcctatgag 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattcacaacttctttgtgaatacatcaaaaacctcagactgcagaaaatccctatgag 264

                                                                       
Query: 65  tattagtaatgtagaaatgttctgtttctcctgtttaacttcccaaatgttgtatggctc 124
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tattactaatgtagaaatgttctgtttctcctgtttaacttcccaaatgttgtatggctc 324

                                                                       
Query: 125 atattataggaaaattcatgaatccaatcattgtggtaaagctgtgaatgcttgcacatt 184
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 atattataggaaaattcatgaatccaatcattgtggtaaagctgtgaatgcttgcatatt 384

                                                                       
Query: 185 ttgtcaaatatatgaaaaacctcataaaggaaaaagatattgtaactttgggccatgtga 244
           |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |
Sbjct: 385 ttgtcaaatatatgaaaaacctcataaaggaaaaagatattgtaactttgagtcatgtaa 444

                                                                       
Query: 245 taaatgctctttccatcactggtagttttaaagatgtaaataataaccataatgaatcaa 304
           | ||||||||||||||||| | || |||||||||||||||||||||||||||||||||||
Sbjct: 445 tgaatgctctttccatcacagatacttttaaagatgtaaataataaccataatgaatcaa 504

                                                                       
Query: 305 accaacatggataaaaacaacatgacagaaccttattatatctgattcctctttacaatt 364
           |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| 
Sbjct: 505 accaacatggataaaaacaacacgatagaaccttattatatctgattcctctttacaatc 564

                                                                       
Query: 365 agaatacattgttaacctaatctatacagataaatgattcattagtataataaatggggt 424
           |||||| ||||||||||||| | |||||||||||||||||||| ||||||||| ||||||
Sbjct: 565 agaatagattgttaacctaaccaatacagataaatgattcattggtataataattggggt 624

                                                                       
Query: 425 aaaacttatacatgtaccaattgcatgcacagtcttaaataaaatcttactatagagaaa 484
           |||||||||||||||| ||||||||| ||||| |||||||||||||||||| ||||||||
Sbjct: 625 aaaacttatacatgtatcaattgcatacacaggcttaaataaaatcttactgtagagaaa 684

                                                                       
Query: 485 cactctgaaaatatctaatgtgttaaattctatttatatcacaggcatcttcaaagggat 544
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 685 cactctgaaaatatctaatgtgttaaactctatttatatcacaggcatcttcaaagggat 744

                     
Query: 545 ggaccaagta 554
           ||||||||||
Sbjct: 745 ggaccaagta 754


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space:   513536
Effective search space used:   513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information