Query= MSMg01no078_g02.b1 MSMg01no078_g02.b1 CHROMAT_FILE:
MSMg01no078_g02.b1 PHD_FILE: MSMg01no078_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:41 2005
(351 letters)
>mm_chr17_32491906_32492656
Length = 751
Score = 650 bits (336), Expect = 0.0
Identities = 345/348 (99%)
Strand = Plus / Plus
Query: 4 ggaattccacttcacaccacctgcataggaacacagaaagaagtggccaatgctttgagg 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccacttcacagaacctgcataggaacacagaaagaagtggccaatgctttgagg 263
Query: 64 aaaggccgaggtgtagtctagtccaagtgcttagaggcatatccaccactacacagtatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaaggccgaggtgtagtctagtccaagtgcttagaggcatatccaccactacacagtatg 323
Query: 124 gatgttaagacaagaactcaagggaagaagtgtcttccaacggacagccatctcttctat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gatgttaagacaagaactcaagggaagaagtgtcttccaacggacagccatctcttctat 383
Query: 184 tgtggagtcatggcagagtctcctgggcatgataagcagaggattccccaagtgcctttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtggagtcatggcagagtctcctgggcatgataagcagaggattccccaagtgcctttg 443
Query: 244 tcatctgatgagtgtgctctgatatggtggtggttataaagcaaagcctgactaaccatc 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 444 tcatctgatgagtgtgctctgatatggtggtgggtataaagcaaagcctgactaaccatc 503
Query: 304 cttcccctctcttgtggcagccttaagctagtttccaatgaacagagg 351
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cttcccctctcttgtggcagccttaagctagtttccaatgaacagagg 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_g02.g1 MSMg01no078_g02.g1 CHROMAT_FILE:
MSMg01no078_g02.g1 PHD_FILE: MSMg01no078_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:41 2005
(144 letters)
>mm_chr17_32664376_32664919
Length = 544
Score = 259 bits (134), Expect = 5e-74
Identities = 144/152 (94%), Gaps = 8/152 (5%)
Strand = Plus / Minus
Query: 1 agtagccagaccacacaaagtatgaagagagaaccaattcctatccaagagttgtcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agtagccagaccacacaaagtatgaagagagaaccaattcctatccaagagttgtcttct 247
Query: 61 aacctccacacatgccatggacttcacacacactctcgagcgtgcg--------cgcgca 112
|||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 246 aacctccacacatgccatggacttcacacacactctcgagcgtgcgtgcgcgcgcgcgca 187
Query: 113 cacacacacacacacacacacacacacacaca 144
||||||||||||||||||||||||||||||||
Sbjct: 186 cacacacacacacacacacacacacacacaca 155
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
