XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
TTGTTTCTCTCTCTCCTTTCTCCTTTCTCTTCTGTCTAGTATTAGGGTGT
CAAACTAGGGGTAATTTTGTGGAGAAAAGGAAAAGAAGGATAGATTATAT
CTACCTTTAGAATATGAAAGGGACAAATGTCTGGAATTAGGTTGATAAGG
ATTTTTGGAGATGAATGAAATTTTAATGTCATAAAGACCTAATTAGATTA
ATAATAATTAAAGAGTTATACCTAAGTACTATGTCTTTGCCAATTGCTCA
TCATCAAGCTGTTAAATAATTTAGATAAGTAACAACCTAGACGTTTTGGG
TCCCACAAGAAAATCCTTTCCAAATTTCAGTGATTTAGACAGAATATTCA
ATCCATTAGAAGGTTGAAGAAGGTGACCACTTTCTAAAAAAGGAGTGGTT
CTCCTATCTCTGAGAAGCACTACTTTTGTCTCTTCCATTAATATAGGACA
GGTACCCATTGCTATGTCTAAGTCAATGCTGGCTATTAAGATTTCTATGT
GATTTCCTGGAAGACAGTTTCGGTAAATTAGAATTGCACTTTCACCTTTA
ATTAATGGATAGACTATTGTTTTTTTTTTTAATTTTCCCTGTTTTCATGT
TCACTTTAGTTGCCTGTTACCATATAGACTGTGTCTATGATTACATATTT
AATTTGATAATAAAA

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCAGAACAGCTAGGGCTACACAGGGAAACCCTG
ACTTGAAAACAAAGCAAAGCAAAACAAAACAAAACAAAATAAAAATAAGA
TAACTTTGTAAGGAATAACCATCCCTGATGTCAAACAGCACTACAGAGTA
CTAGTGACAAAAAGTAAATGATACTGGTACAGAAACAGACACATTGATCA
AATAATTTGTATCGGTGGCCCATCAATAAATCCATGCAACTGTGGATACT
TGATTTTGATAAAGAAACCAAACCATACACAGAAAAGAGAGAGTATCAAT
GAATGATACTGATCTAACTGGGCTTCCACATGTAGAAGAAAGAAAATAGA
GTCATGGTTACCACCCTCCACAATGCTGAAGTTCAAGTGGATCAATGACC
TAATCAAAAAATTAGATACAATAAATCTCATAAATGAGAAAGGGGGAAAA
AGCCTTGAATGCATTAGTACAGGAGACAATGACCTGAAGAGAACTTCAAT
GTTTCAGCCTTTAAGATAACAAGCTTATCACTTGTGGGATATCATGAAAT
TGCAAAGCTTCTGTAAGGCAAAGGACACTGTCCATAGGACAAAATATAAG
ACCACAGATTGTGAAGGGACATTCACTAATCCTATATATGACAGTGGCCT
AATATCCAAAATTA

Query= MSMg01no079_n17.b1 MSMg01no079_n17.b1 CHROMAT_FILE:
MSMg01no079_n17.b1 PHD_FILE: MSMg01no079_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:36 2005
         (665 letters)



>mm_chr17_19906426_19907493
          Length = 1068

 Score = 1087 bits (562), Expect = 0.0
 Identities = 645/688 (93%), Gaps = 28/688 (4%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctttgtttctctctctcctttctcctttctcttctgtctagtattagggtgtca 63
           |||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| |
Sbjct: 204 ggaattctttgtttctctatctcctgtctcctttctcttctgtctagtgttagggtgtga 263

                                                                       
Query: 64  aactaggggtaattttgtggagaaaaggaaaagaaggatag---attatatctaccttta 120
           |||||||||||||||||||||||||||||||||||||||||   ||| |||||| |||||
Sbjct: 264 aactaggggtaattttgtggagaaaaggaaaagaaggatagaatattgtatctaacttta 323

                                                                       
Query: 121 gaatatgaaagggacaaatgtctggaattaggttgataaggatttttggagatgaatgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 324 gaatatgaaagggacaaatgtctggaattaggttgataaggatttttggagatgattgaa 383

                                                                       
Query: 181 attttaatgtcataaagacctaattagattaataataattaaagagttatacctaagtac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 384 attttaatgtcataaagacctaattagattaataataattaaagagttatacctaagtaa 443

                                                                       
Query: 241 tatgtctttgccaattgctcatcatcaagctgttaaataatttagataagtaacaaccta 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatgtccttgccaattgctcatcatcaagctgttaaataatttagataagtaacaaccta 503

                                                                       
Query: 301 gacgttttgggtcccacaagaaaatcctttccaaatttcagtgatttagacagaatattc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gacgttttgggtcccacaagaaaatcctttccaaatttcagtgatttagacagaatattc 563

                                                                       
Query: 361 aatccattagaaggttgaagaaggtgaccactttctaaaaaaggagtggttctcctatct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aatccattagaaggttgaagaaggtgaccactttctaaaaaaggagtggttctcctatct 623

                                                                       
Query: 421 ctgagaagcactacttttgtctcttccattaatataggacaggtacccattgctatgtct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 624 ctgagaagcactacttttgtctcttccattaatataggacaggtacccattgctatgtca 683

                                                                       
Query: 481 aagtcaatgctggctattaaga-tt-tctatgtgatttcctggaagacagtttcggtaaa 538
           || ||||||||||||||||||| || ||||||  |||| |||||||||||||||||||||
Sbjct: 684 aactcaatgctggctattaagacttctctatg--attttctggaagacagtttcggtaaa 741

                                                                       
Query: 539 ttagaattgcactttcacctttaattaatggatagactattgttttttttttt------- 591
           |||||||||||||||| ||||||||||||||||||||| ||||||||||||||       
Sbjct: 742 ttagaattgcactttcccctttaattaatggatagactcttgtttttttttttttttttt 801

                                                                       
Query: 592 --------------aattttccctgttttcatgttcactttagttgcctgttaccatata 637
                         ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ttttttttttttttaattttccctgttttcatgttcactttagttgcctgttaccatata 861

                                       
Query: 638 gactgtgtctatgattacatatttaatt 665
           ||||||||| ||||||||||||||||||
Sbjct: 862 gactgtgtccatgattacatatttaatt 889


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1068
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1058
Effective search space:   692990
Effective search space used:   692990
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)