Query= MSMg01no080_c19.b1 MSMg01no080_c19.b1 CHROMAT_FILE:
MSMg01no080_c19.b1 PHD_FILE: MSMg01no080_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:00 2005
(584 letters)
>mm_chr17_7010139_7011121
Length = 983
Score = 1083 bits (560), Expect = 0.0
Identities = 575/580 (99%), Gaps = 1/580 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtgaacgttctagagctgggggcaatgagctggttcagtgggtaaagaggctt 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtgaacgttttagagctgggggcaatgagctggttcagtgggtaaagaggctt 264
Query: 65 tctgcctaatgacccgagtccagcctcccagattcacatggtagaatgagacacccaatt 124
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 tctgcctaatgacccgagtccagcctcccagatccacatggtagaatgagacacccaatt 324
Query: 125 tcccacaagccgtcctctgacacctactatgcactgtgaaaccggtgcctcccctctctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcccacaagccgtcctctgacacctactatgcactgtgaaaccggtgcctcccctctctc 384
Query: 185 aaaataaaaatttaaaccaagaaaagtttgtttctacaatgacactcatgtattgaccct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaataaaaatttaaaccaagaaaagtttgtttctacaatgacactcatgtattgaccct 444
Query: 245 gcccaagttcaccgatactgtaccttttttttggctactctaactcttgcctagagtcca 304
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 gtccaagttcaccgatactgtaccttttttt-ggctactctaactcttgcctagagtcca 503
Query: 305 ggatcaatattcctctaccccatctcatcctaagggcagggcaaacattttatttctctc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggatcaatattcctctaccccatctcatcctaagggcagggcaaacattttatttctctc 563
Query: 365 tttatgctcagatataccatggaataccatagctgctgaataaatgaattcaaacaaacg 424
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttatgctcagatataccatggcataccatagctgctgaataaatgaattcaaacaaacg 623
Query: 425 caggatgtgtggggtgctcatttgctggcgtttcctgtgaccgagtaggctagctagctg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caggatgtgtggggtgctcatttgctggcgtttcctgtgaccgagtaggctagctagctg 683
Query: 485 aagtatcagagatttgttccaccactctggagtccaagatggacagcagtgtctcttcct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagtatcagagatttgttccaccactctggagtccaagatggacagcagtgtctcttcct 743
Query: 545 gagggaacggtctttcccaagtctctcttcttaccttgga 584
||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gagggaacggtctttcccaagtctctcttcttaccttgga 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 983
Length adjustment: 10
Effective length of query: 574
Effective length of database: 973
Effective search space: 558502
Effective search space used: 558502
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_c19.g1 MSMg01no080_c19.g1 CHROMAT_FILE:
MSMg01no080_c19.g1 PHD_FILE: MSMg01no080_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:00 2005
(521 letters)
>mm_chr17_8125074_8125994
Length = 921
Score = 812 bits (420), Expect = 0.0
Identities = 426/428 (99%)
Strand = Plus / Plus
Query: 94 gattctattaagtaaactccagctatgggttggagtaaggaaatcccagctctgcaaagg 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gattctattaagtaaactccagctatgggttggagtaaggaaatcccagctctgcaaagg 353
Query: 154 aatgtgagtccatcaaaatggacattgagcctatataagagctacctgaaaaaccaatgt 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aatgtgagtccatcaaaatggacattgagcctatataagagctacctgaaaaaccaatgt 413
Query: 214 tacaaattcagatcaatagaccatagagaatattatcattgtcagtttcttttcctcgaa 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tacaaattcagatcaatagaccatagagaatattatcattgtcagtttcttttcctcgaa 473
Query: 274 cctttcccttccctctccattttatttttcccactttcttaccacttaaagaccatttta 333
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tctttcccttccttctccattttatttttcccactttcttaccacttaaagaccatttta 533
Query: 334 gacagaagcaaagtttcagtgtaatcagcttcttgttggatcaggccccagtacacttcc 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gacagaagcaaagtttcagtgtaatcagcttcttgttggatcaggccccagtacacttcc 593
Query: 394 accaaagcatcgttggtataaatagggtattcgctaagagagcctggacagaatgctcag 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 accaaagcatcgttggtataaatagggtattcgctaagagagcctggacagaatgctcag 653
Query: 454 ctcttccttaactttccccagacgtgtcaactctgcagaatgactcggcctatgacagca 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ctcttccttaactttccccagacgtgtcaactctgcagaatgactcggcctatgacagca 713
Query: 514 atgaccca 521
||||||||
Sbjct: 714 atgaccca 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
