Query= MSMg01no084_g18.b1 MSMg01no084_g18.b1 CHROMAT_FILE:
MSMg01no084_g18.b1 PHD_FILE: MSMg01no084_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:27 2005
(381 letters)
>mm_chr17_42644584_42645364
Length = 781
Score = 663 bits (343), Expect = 0.0
Identities = 366/377 (97%), Gaps = 6/377 (1%)
Strand = Plus / Minus
Query: 9 gaattctacagtttcatgagaaatcatcacaggtccatttttaaggtactgtaacttctg 68
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gaattctacagtctcatgagaaatcatcacaggtccatttttaaggtactgtaacttctg 334
Query: 69 gcttgctttagggcatccagagcatatttgattcctgcctaatgcagattctgcttgacc 128
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gcttgctttagggcatccagggcatatttgattcctgcctaatgcagattctgcttgacc 274
Query: 129 cagcacagacctggcttagccctgggttttcccaatggccatcttagtgtaggtggc--- 185
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cagcagagacctggcttagccctgggttttcccaatggccatcttagtgtaggtggcttt 214
Query: 186 ---ttttttttgatactatgagaaagcaattttctgattgcttcccttagcatgaagttt 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tttttttttttgatactatgagaaagcaattttctgattgcttcccttagcatgaagttt 154
Query: 243 tttatggactttagggctttgcaactaaaacccatgaggcatttatgatacagaatatga 302
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 153 tttatggactttagggctttgcaactaaaacccatgaggcatttatgatagagaatatga 94
Query: 303 caattttaataaaaagtgtaataaccctgaaaatagtgtctttaatcatctacatactag 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 gaattttaataaaaagtgtaataaccctgaaaatagtgtctttaatcatctacatactag 34
Query: 363 taatcatgcgtgcattg 379
|||||||||||||||||
Sbjct: 33 taatcatgcgtgcattg 17
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_g18.g1 MSMg01no084_g18.g1 CHROMAT_FILE:
MSMg01no084_g18.g1 PHD_FILE: MSMg01no084_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:27 2005
(306 letters)
>mm_chr17_42496695_42497400
Length = 706
Score = 559 bits (289), Expect = e-164
Identities = 303/309 (98%), Gaps = 3/309 (0%)
Strand = Plus / Plus
Query: 1 aaggccagccagatctgcatagtaagttctggggcacagggccaggcccaagaagtggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 aaggccagccagatctgcatagtaagttctggggcacagggccaggcccaagaagtggga 257
Query: 61 gtgggtgcgtaggggaacagtgcgggggaaggttacagggaactttctggatagcatttg 120
|||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 258 gtgggtgcgtaggggagcagtgtgggggaagggtacagggaactttctggatagcatttg 317
Query: 121 aagtgtaaataaagaaaatatctaataaaaaaaggaaaaaaaaaa---gaaatgtgttct 177
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 318 aagtgtaaataaagaaaatatctaataaaaaaaggaaaaaaaaaaaaagaaatgtgttct 377
Query: 178 tctgaataatccagtacagttcaaatcatggagttccaaatacaaggtgaaacattctga 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tctgaataatccagtacagttcaaatcatggagttccaaatacaaggtgaaacattctga 437
Query: 238 tcacttcttgactttagtatacggtgccttacatatgaaattaaagataagtaatttttt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcacttcttgactttagtatacggtgccttacatatgaaattaaagataagtaatttttt 497
Query: 298 tgagacaga 306
|||||||||
Sbjct: 498 tgagacaga 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 706
Length adjustment: 9
Effective length of query: 297
Effective length of database: 697
Effective search space: 207009
Effective search space used: 207009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
