Query= MSMg01no086_j09.b1 MSMg01no086_j09.b1 CHROMAT_FILE:
MSMg01no086_j09.b1 PHD_FILE: MSMg01no086_j09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:23 2005
(240 letters)
>mm_chr17_10866310_10866949
Length = 640
Score = 439 bits (227), Expect = e-128
Identities = 236/239 (98%)
Strand = Plus / Minus
Query: 1 aggcagcaagggaaaggttgagtatggcagccgggcctgaccatgcactgcaaatgaggc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 439 aggcagcaagggaaaggttgagtatggcagccgggcctgaccatgcactggaaatgaggc 380
Query: 61 gtgtttgtgtcagtcagaaacactgtcccaggcctctctcctgttcatttcctatcctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtgtttgtgtcagtcagaaacactgtcccaggcctctctcctgttcatttcctatcctaa 320
Query: 121 ggggctccactcggacagcagcacatctgtatgggttcactactgagtgtggacagatgg 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 319 ggggctccactcggacagcagcacatctgtatgggttcactactgagtatggacagatgg 260
Query: 181 gtctggaggggtggaggatagagttttggtgctccaggaaagcagagagagtctttgga 239
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 259 gtctggaggggtggaggatagagttttggggctccaggaaagcagagagagtctttgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no086_j09.g1 MSMg01no086_j09.g1 CHROMAT_FILE:
MSMg01no086_j09.g1 PHD_FILE: MSMg01no086_j09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:23 2005
(158 letters)
>mm_chr17_10744839_10745398
Length = 560
Score = 296 bits (153), Expect = 5e-85
Identities = 157/159 (98%), Gaps = 2/159 (1%)
Strand = Plus / Plus
Query: 1 ctgtgtctcaggtgggagggctggccttggagagcttgtctcctgagcctg--gcataga 58
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ctgtgtctcaggtgggagggctggccttggagagcttgtctcctgagcctgtggcataga 260
Query: 59 cttttgtgtcttggagcttgtggcatctgaagcagcttgcttttagcgggcaggtacaat 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttttgtgtcttggagcttgtggcatctgaagcagcttgcttttagcgggcaggtacaat 320
Query: 119 gaggggccgtgatagaactatcagaccctgttaggccta 157
|||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggggccgtgatagaactatcagaccctgttaggccta 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 560
Length adjustment: 8
Effective length of query: 150
Effective length of database: 552
Effective search space: 82800
Effective search space used: 82800
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
