Query= MSMg01no087_l17.b1 MSMg01no087_l17.b1 CHROMAT_FILE:
MSMg01no087_l17.b1 PHD_FILE: MSMg01no087_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:57 2005
(415 letters)
>mm_chr17_63474150_63474964
Length = 815
Score = 725 bits (375), Expect = 0.0
Identities = 405/415 (97%)
Strand = Plus / Minus
Query: 1 agactgttgtgatgggtggtttgctcaacttagaccatcaggtgaaattgcttttcagtt 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 615 agactgttgtgatgggtggtttgttcaacttagaccatcaggtgaaattgcttttcagtt 556
Query: 61 aaaagaaacatttctcagaattggctcagggcagatcattgcaattacctggttacatct 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 555 aaaagaaacatttctcagaattggctcagggcagaacattgcaattacctggttacatct 496
Query: 121 agaattgctaaactgcgaagtatgaaacctccgcacactgtagcaaatatgatacaaaga 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agaattgctaaactgtgaagtatgaaacctccgcacactgtagcaaatatgatacaaaga 436
Query: 181 aaataaagcagtctcttatccaaaccttattagcttaaaattactcctggggatttgtac 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aaataaagcagtctcttagccaaaccttattagcttaaaattactcctggggatttgtac 376
Query: 241 ttacctgacctctcctctgtctttttcaacccagcatattttgaataatctgaacttcac 300
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 375 ttacctgaccacacctctgtctttttcaacccagcatattttgaataatctgaactttaa 316
Query: 301 ttactgattattaatttgacatggaactctccacagatgcccaaataccatctggagaat 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttaatgattattaatttgacatggaactctccacagatgcccaaataccatctggagaat 256
Query: 361 gctagaaattacacataataaatgtttctcttatatgactctttgtacccaatta 415
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gctacaaattacacataataaatgtttctcttatatgactctttgtacccaatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no087_l17.g1 MSMg01no087_l17.g1 CHROMAT_FILE:
MSMg01no087_l17.g1 PHD_FILE: MSMg01no087_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:58 2005
(284 letters)
>mm_chr17_63333718_63334401
Length = 684
Score = 526 bits (272), Expect = e-154
Identities = 281/284 (98%), Gaps = 1/284 (0%)
Strand = Plus / Plus
Query: 1 caggtccctgctggacatgtccttatagggagagaggaaattgaacctgtgatttggcca 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 202 caggtccctgctggacatgtccttatagggagagaggaaattgaac-tgtgatttggcca 260
Query: 61 ccaggctacctcacaggtggcagagaggccacatgtaccagaacatgcagacccagagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaggctacctcacaggtggcagagaggccacatgtaccagaacatgcagacccagagta 320
Query: 121 agaggggaactatcctaactcctgccagtctcaggatgtttagcatttggacacgtctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaggggaactatcctaactcctgccagtctcaggatgtttagcatttggacacgtctcc 380
Query: 181 acctcactcttgctctagactggggaccctaaaagcttgtctttccagccccacactaca 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 acctcactcttgctctagactggggaccctaaaagcttggctttccagccccacactaca 440
Query: 241 ccttactcccagccccctccttctctgttccagttgaccattga 284
|||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 ccttactctcagccccctccttctctgttccagttgaccattga 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
