Query= MSMg01no088_d23.b1 MSMg01no088_d23.b1 CHROMAT_FILE:
MSMg01no088_d23.b1 PHD_FILE: MSMg01no088_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:39 2005
(322 letters)
>mm_chr17_30623371_30624092
Length = 722
Score = 563 bits (291), Expect = e-165
Identities = 306/311 (98%)
Strand = Plus / Plus
Query: 12 ggaattccatggcggcatgactgtttaacagccatcagtgtatgtgttagaaacagccac 71
||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 212 ggaattccacggcggcatgactgtttaacagccatcaatgtatgtgttaggaacagccac 271
Query: 72 cagacactaagaatgacacggatgatgggcagaagaaaagcagggtcacgccatggaagg 131
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cagacactaagaatgagacggatgatgggcagaagaaaagcagggtcacgccatggaagg 331
Query: 132 agaaactgacagtggcagaagcgccattctttatcgaagctgacttgatttggaggaggc 191
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 332 agaaactgacagtggcagaagcaccattctttatcgaagctgacttgatttggaggaggc 391
Query: 192 aacttggtcactgaaacagatccaactttgaccagtgttccttgactcctagagccttta 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aacttggtcactgaaacagatccaactttgaccagtgttccttgactcctagagccttta 451
Query: 252 ggtctaacatttgagcaccgaaacaacaaatctagcagatcttacattagcctccacaaa 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ggtctaacatttgagcaccgaaacaacaaatctagcagatcttacattagcctccacaaa 511
Query: 312 gtcagctgagg 322
|||||||||||
Sbjct: 512 gtcagctgagg 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_d23.g1 MSMg01no088_d23.g1 CHROMAT_FILE:
MSMg01no088_d23.g1 PHD_FILE: MSMg01no088_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:39 2005
(315 letters)
>mm_chr17_30763113_30763827
Length = 715
Score = 549 bits (284), Expect = e-161
Identities = 308/316 (97%), Gaps = 2/316 (0%)
Strand = Plus / Minus
Query: 1 atcatgttccactatcttgagag-acttctagaaatctttgagggggaacacgtcataga 59
||||||||||| ||||||||||| | ||||||||||||||||||||||| | ||||||||
Sbjct: 515 atcatgttccagtatcttgagagca-ttctagaaatctttgagggggaaaatgtcataga 457
Query: 60 gctgtgcaaactgttaacaatgttttctgtggactttgcatttccggaaactgcatagtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gctgtgcaaactgttaacaatgttttctgtggactttgcatttccggaaactgcatagtg 397
Query: 120 ttatatttgtataatggaattacatagatgtgttagtttgctatgagtgactggggatag 179
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 396 ttatatttgtataatggaattacataaatgtgttagtttgctatgagtgactggggatag 337
Query: 180 gctgaggagcatgaagaaaaagggatatgataattggtgttatagactttgagagtcctg 239
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gctgaggagcatgaaggaaaagggatatgataattggtgttatagactttgagagtcctg 277
Query: 240 ggataaaaacctcagactcgatccagttttaaatacaggatctattgtttgacacccata 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ggataaaaacctcagactcgatccagttttaaatacaggatctattgtttgacacccata 217
Query: 300 tagccaagtctcaggt 315
|||||||||||||||
Sbjct: 216 aagccaagtctcaggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
