Query= MSMg01no090_d19.b1 MSMg01no090_d19.b1 CHROMAT_FILE:
MSMg01no090_d19.b1 PHD_FILE: MSMg01no090_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:20 2005
(180 letters)
>mm_chr17_47687509_47688088
Length = 580
Score = 325 bits (168), Expect = 1e-93
Identities = 177/180 (98%)
Strand = Plus / Minus
Query: 1 ttccagagtcctgggatcacagacttgatctctggatgggctttatcacactaatgcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 380 ttccagagtcctgggatcacagacttgatctctggatgggctttatcacactaatgcact 321
Query: 61 taacctaaaactccacaaggaatctggaaacagatgagagagagctaccccatcccacgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 taacctaaaactccacaaggaatctggaaacagatgagagagagctaccccatcccacgc 261
Query: 121 taacaagggtccaggttggaaggaaaacccatcacaattcaggccactccctgctgtggc 180
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 taacaagagtccaggctggaaggaaaacccatcacaattcaggccactccctgctgtggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 580
Length adjustment: 8
Effective length of query: 172
Effective length of database: 572
Effective search space: 98384
Effective search space used: 98384
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no090_d19.g1 MSMg01no090_d19.g1 CHROMAT_FILE:
MSMg01no090_d19.g1 PHD_FILE: MSMg01no090_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:20 2005
(215 letters)
>mm_chr17_47529405_47530018
Length = 614
Score = 377 bits (195), Expect = e-109
Identities = 210/215 (97%), Gaps = 1/215 (0%)
Strand = Plus / Plus
Query: 1 caggccagactttgcctccgacagctgttggactccctaacctcctgcgggtcgactaga 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 caggccagactttgcctccgacagctgttggactccctaacctcctgcaggtcgactaga 260
Query: 61 tgtattccaggttatcccgcaaatgtccttcatgcacccaatatagaagctaggctacca 120
|| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcttccag-ttatcccgcaaatgtccttcatgcacccaatatagaagctaggctacca 319
Query: 121 gggaacctctctgcctttctctgcctccttccatctgtgcagctggggaaggcacctcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 320 gggaacctctctgcctttctctgcctccttccatctgtgcagctggggaagtcacctcag 379
Query: 181 aggacaggaagtaggaccagtgtcacactaagtag 215
|||||||||||||||||||||||||||||||||||
Sbjct: 380 aggacaggaagtaggaccagtgtcacactaagtag 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 614
Length adjustment: 9
Effective length of query: 206
Effective length of database: 605
Effective search space: 124630
Effective search space used: 124630
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
