Query= MSMg01no092_e16.b1 MSMg01no092_e16.b1 CHROMAT_FILE:
MSMg01no092_e16.b1 PHD_FILE: MSMg01no092_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:06 2005
(122 letters)
>mm_chr17_62828671_62829192
Length = 522
Score = 205 bits (106), Expect = 7e-58
Identities = 118/122 (96%)
Strand = Plus / Minus
Query: 1 atgctagttgtgttgactgctgaagaggactctcacagtatggttgcccatgtgaatcaa 60
||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 322 atgctagctgtgttgactgctgaagaggactctcacagtatggttggctatgtgaatcaa 263
Query: 61 ggttttgtagctccagtatggtagtatgagagccatctaaagctttcaacctttgacagt 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggttttgtagctccagtatggcagtatgagagccatctaaagctttcaacctttgacagt 203
Query: 121 ct 122
||
Sbjct: 202 ct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 122
Length of database: 522
Length adjustment: 8
Effective length of query: 114
Effective length of database: 514
Effective search space: 58596
Effective search space used: 58596
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no092_e16.g1 MSMg01no092_e16.g1 CHROMAT_FILE:
MSMg01no092_e16.g1 PHD_FILE: MSMg01no092_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:06 2005
(378 letters)
>mm_chr17_62677364_62678140
Length = 777
Score = 596 bits (308), Expect = e-174
Identities = 364/390 (93%), Gaps = 15/390 (3%)
Strand = Plus / Plus
Query: 1 tcctcaaagcatattcaacttataggtttgaatttagctccaaaaa------------aa 48
|||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 189 tcctcaaagcatattcaacttataggtttgaatttagctccaaaaaaagaaagaaaggaa 248
Query: 49 gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa 108
||||||||||||||||||||||||||||| ||| ||| ||| ||| ||| ||| ||| ||
Sbjct: 249 gaaagaaagaaagaaagaaagaaagaaaggaaggaaggaaggaaggaaggaaggaaggaa 308
Query: 109 g-aacgaaagaaagcagagagagcaaatgacctcttctaccaattcacgagtgcctggca 167
| || ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ggaaggaaggaa-gcagagagagcaaatgacctcttctaccaattcacgagtgcctggca 367
Query: 168 aaccaatgttttatttttgattttatataagtagtatggatggctttatttcaatacagt 227
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 368 aaccaatgttttatttttgattttatataagtagtatggatggctttatttcattacagt 427
Query: 228 ataaattagctgaaaggaataaaatattcttctattgtttagtgcaatttggtcccattc 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ataaattagctgaaaggaataaaatattcttctattgtttagtgcaatttggtcccattc 487
Query: 288 cctcccttaatgttatgtggtgtgtggtgttttgcctttaatttgtactctggggaatct 347
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 488 cctcccttaatgttatgtggtgtgtggtgttttgcctttaatttgtactctgggga-tct 546
Query: 348 tcacagtgggtggtacttgtttttattctg 377
||||||||||||||||||||||||||||||
Sbjct: 547 tcacagtgggtggtacttgtttttattctg 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 777
Length adjustment: 9
Effective length of query: 369
Effective length of database: 768
Effective search space: 283392
Effective search space used: 283392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
