Query= MSMg01no092_l01.b1 MSMg01no092_l01.b1 CHROMAT_FILE:
MSMg01no092_l01.b1 PHD_FILE: MSMg01no092_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:38 2005
(320 letters)
>mm_chr17_85688343_85689062
Length = 720
Score = 522 bits (270), Expect = e-152
Identities = 306/326 (93%), Gaps = 14/326 (4%)
Strand = Plus / Minus
Query: 1 tatacggcattggccatgaatcattatgcaactaaaatggtccactgtatacaccgacag 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 715 tatacggcattggccatgaatcatcatgcaactaaaatggtccactgtatacatggacag 656
Query: 61 tctatagtcgcacatgcgcacacaga------cacatgcacaaacatgcacccacagaca 114
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 655 tctatagtcgctcatgcgcacacagacacatgcacatgcacaaacatgcacccacagaca 596
Query: 115 cgcacacatgcacacatgcactcacatatgtgcacacaaacacacagacatgtgcacgca 174
| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 c--------gcacacatgcactcacatatgtgcacacaaacacacagacatgtgcacgca 544
Query: 175 cacacacacacacactcactcacgatgtccagctactcaaagtgaaaagagcaggctaga 234
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cacacacacacacacacactcacgatgtccagctactcaaagtgaaaagagcaggctaga 484
Query: 235 ttcaagctaaaacaatgccttaagtttactagcatagttcatacttggacatacactaaa 294
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ttcaagctaaaacgatgccttaagtttactagcatagttcatacttggacatacactaaa 424
Query: 295 acttgaatccaaattcttctttcaaa 320
||||||||||||||||||||||||||
Sbjct: 423 acttgaatccaaattcttctttcaaa 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_l01.g1 MSMg01no092_l01.g1 CHROMAT_FILE:
MSMg01no092_l01.g1 PHD_FILE: MSMg01no092_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:38 2005
(168 letters)
>mm_chr17_85582125_85582692
Length = 568
Score = 317 bits (164), Expect = 2e-91
Identities = 167/168 (99%)
Strand = Plus / Plus
Query: 1 tttccttagctagtgagagactgaggtgtgactgaagctcggctgtggctcctgggtcag 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 tttccttagctagtgagagactgaggtgcgactgaagctcggctgtggctcctgggtcag 260
Query: 61 cgtcgtgcatccctgactttatagcaatgggaagaaacttggatagttggaaactgtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgtcgtgcatccctgactttatagcaatgggaagaaacttggatagttggaaactgtgtt 320
Query: 121 agtacttgaagatgcacatgctgggggttgtgtgtgtgtgtgtgtgtg 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtacttgaagatgcacatgctgggggttgtgtgtgtgtgtgtgtgtg 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 568
Length adjustment: 8
Effective length of query: 160
Effective length of database: 560
Effective search space: 89600
Effective search space used: 89600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
