Query= MSMg01no092_m02.b1 MSMg01no092_m02.b1 CHROMAT_FILE:
MSMg01no092_m02.b1 PHD_FILE: MSMg01no092_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:43 2005
(604 letters)
>mm_chr17_83813028_83814031
Length = 1004
Score = 1147 bits (593), Expect = 0.0
Identities = 599/601 (99%)
Strand = Plus / Plus
Query: 4 ggaattcctcctcatccagacagcacctctgaaatttcagggtctgttggctcagaccag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctcctcatccagacagcacctctgaaatttcagggtctgttggctcagaccag 263
Query: 64 gcagcaggaactgctcctatacatgaatcccatgccttctttgttgtttctacttttgaa 123
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcagcagggactgctcctatacatgaatcccatgccttctttgttgtttctacttttgaa 323
Query: 124 aaacagtagctagaaattgacgggactaatggtatatcttgctttgagacaagaggaaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaacagtagctagaaattgacgggactaatggtatatcttgctttgagacaagaggaaag 383
Query: 184 gagaactattccaaagtcattgcaaatagagaagacagaatctggtggggaggggtattg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagaactattccaaagtcattgcaaatagagaagacagaatctggtggggaggggtattg 443
Query: 244 ctgccctcgtaaagaatgaagtcattgactgagaaagcttgtcaacggcatgacaaggag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgccctcgtaaagaatgaagtcattgactgagaaagcttgtcaacggcatgacaaggag 503
Query: 304 aaaagaaagtagaagaggttttgagcatcagagttaagaagaagtaaatctccttcctta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaagaaagtagaagaggttttgagcatcagagttaagaagaagtaaatctccttcctta 563
Query: 364 gactgtttttacctttgcattgtttaaaatcttgcccatcacagcattgcaactggtaaa 423
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 564 gactgtttttacctttgcattgtttaaaatcttacccatcacagcattgcaactggtaaa 623
Query: 424 agctactactgtcatgaacatttttaagttgctaaaagtatttcaccatgataattttaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agctactactgtcatgaacatttttaagttgctaaaagtatttcaccatgataattttaa 683
Query: 484 aagttatcaatacaagaaatcacctgtggcatactagtgctggattttatagcaactgtc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagttatcaatacaagaaatcacctgtggcatactagtgctggattttatagcaactgtc 743
Query: 544 actataatttgagggggaagtgctcttatgtaagtgccttccctagaagttttgaaaaat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 actataatttgagggggaagtgctcttatgtaagtgccttccctagaagttttgaaaaat 803
Query: 604 c 604
|
Sbjct: 804 c 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_m02.g1 MSMg01no092_m02.g1 CHROMAT_FILE:
MSMg01no092_m02.g1 PHD_FILE: MSMg01no092_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:43 2005
(421 letters)
>mm_chr17_83951034_83951856
Length = 823
Score = 775 bits (401), Expect = 0.0
Identities = 417/423 (98%), Gaps = 2/423 (0%)
Strand = Plus / Minus
Query: 1 aaggctaacctgggcaatttagtgagaaactgtctccaaataatcccaagaaccaaagca 60
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aaggctaacctaggcaacttagtgagaaactgtctccaaataatcccaagaaccaaagca 403
Query: 61 cagaagtagatcaaaaattaataacaatgttatagtcatcatagggcgacaaacttgatg 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 402 cagaagtagatcaaaaattaataacaatgttatagtcatcatagggtgacaaacttgatg 343
Query: 121 tttataacattttacttattttttcataaacttcttacaattttcatcaatattttattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tttataacattttacttattttttcataaacttcttacaattttcatcaatattttattt 283
Query: 181 ataccagctcaggag--aaaaaaaaagagagagattaaaagagagatgaatcaacctaac 238
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ataccagctcaggagaaaaaaaaaaagagagagattaaaagagagatgaatcaacctaac 223
Query: 239 aaaccattaagaatcattttaagggctggtgagatggctcagcggttaagagcactgact 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 aaaccattaagaatcattttaagggctggtgagatggctcagcggttaagagcactgact 163
Query: 299 gctcttccagaggtcctgagttcaattcccagtaaccacatggtggctcacaaccatctg 358
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 162 gctcttccagaggtcctgagttcaattcccagcaaccacatggtggctcacaaccatctg 103
Query: 359 taatgggatccgatggctttttcctggtctgtctgaagacagcgacagagtacttatatg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 taatgggatccgatggctttttcctggtctgtctgaagacagcgacagagtacttatatg 43
Query: 419 cat 421
|||
Sbjct: 42 cat 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 823
Length adjustment: 9
Effective length of query: 412
Effective length of database: 814
Effective search space: 335368
Effective search space used: 335368
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
