Query= MSMg01no095_e04.b1 MSMg01no095_e04.b1 CHROMAT_FILE:
MSMg01no095_e04.b1 PHD_FILE: MSMg01no095_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:13 2005
(630 letters)
>mm_chr17_8764475_8765507
Length = 1033
Score = 1154 bits (597), Expect = 0.0
Identities = 620/629 (98%), Gaps = 3/629 (0%)
Strand = Plus / Minus
Query: 5 gaattcctatttctacgaggaattgtacccagcaggagacaagatttcactcctgttaga 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 gaattcctatttctatgaggaattgtacccagcaggagacaagatttcactcctgttaga 774
Query: 65 ttgttgcttctcgaggaggatggaaaggttaggacagaagcaaacatactaaaagtctat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 ttgttgcttctcgaggaggatggaaaggttaggacagaagcaaacatactaaaagtctat 714
Query: 125 tatagccccttaggaagcccacctgaccaccacaagtccacccatagatgactgtgcagg 184
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 713 tatagccccttaggaagcccacctgaccaccacaagtccacccatagattactgtgtagg 654
Query: 185 tgccagcaagtacagtcattacaggactgggggaaacagccccaaagccaactatggtgg 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 taccagcaagtacagtcattacaggactgggggaaacagccccaaagccaactatggtgg 594
Query: 245 ataaaagggtttacaactatattttaa---aacaacaacagcacacactattcaaacttc 301
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 593 ataaaagggtttacaactatattttaaaacaacaacaacagcacacactattcaaacttc 534
Query: 302 agtagatagccctaatcccatggacatactagcacaatgcatcatatgcacgtatgaaat 361
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 agtagatagccctaaacccatggacatactagcacaatgcatcatatgcacgtatgaaat 474
Query: 362 tctcaaacaaacaaaaccctattcagctcacatgaaaagctaactgcaatagagtaagat 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 473 tctcaaacaaacaaaaccctattcagctcacatgaaaagctaactgcaatagagtaacat 414
Query: 422 ttaaaaggtagcttacaaatgatagccatgctacaatattacaggtggtagctacactga 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ttaaaaggtagcttacaaatgatagccatgctacaatattacaggtggtagctacactga 354
Query: 482 aataatacaaacaatgactatgctgcagtatcataaatggctaccaggctacaatgctac 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aataatacaaacaatgactatgctgcagtatcataaatggctaccaggctacaatgctac 294
Query: 542 agtattactctctcaaaactgaacgtacagatggatgggtgtggcagaaggcggcttaca 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 agtattactctctcaaaactgaacgtacagatggatgggtgtggcagaaggcggcttaca 234
Query: 602 agctcacagggctgtatgtgctggtctgt 630
|||||||||||||||||||||||||||||
Sbjct: 233 agctcacagggctgtatgtgctggtctgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1033
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1023
Effective search space: 634260
Effective search space used: 634260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_e04.g1 MSMg01no095_e04.g1 CHROMAT_FILE:
MSMg01no095_e04.g1 PHD_FILE: MSMg01no095_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:13 2005
(285 letters)
>mm_chr17_8657215_8657899
Length = 685
Score = 547 bits (283), Expect = e-160
Identities = 283/283 (100%)
Strand = Plus / Plus
Query: 3 tgatttctaagagattgagattgtcagagtagggagaagccccggggagtctggtggaag 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tgatttctaagagattgagattgtcagagtagggagaagccccggggagtctggtggaag 262
Query: 63 aatgactttaatcagaacaggaccaggagcagggagtctgcaggggaggactgagagctg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatgactttaatcagaacaggaccaggagcagggagtctgcaggggaggactgagagctg 322
Query: 123 ggctgcccagaggtgctccatgccatcagagttgtaggggtgcaagattgacacctgtca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggctgcccagaggtgctccatgccatcagagttgtaggggtgcaagattgacacctgtca 382
Query: 183 ccaggatacctctatctcattcccactggaagacttaaagccagactgcaggaggccaag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ccaggatacctctatctcattcccactggaagacttaaagccagactgcaggaggccaag 442
Query: 243 gagagctggactcagactggtgtcagatggtgggccagttcta 285
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gagagctggactcagactggtgtcagatggtgggccagttcta 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
