Query= MSMg01no095_e23.b1 MSMg01no095_e23.b1 CHROMAT_FILE:
MSMg01no095_e23.b1 PHD_FILE: MSMg01no095_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:17 2005
(571 letters)
>mm_chr17_25160971_25161941
Length = 971
Score = 1098 bits (568), Expect = 0.0
Identities = 568/568 (100%)
Strand = Plus / Plus
Query: 4 ggaattccatgcagaatgtcttatttagggtttccattgctgtgaaaagacaccatgacc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatgcagaatgtcttatttagggtttccattgctgtgaaaagacaccatgacc 263
Query: 64 acaacaactcttataaaggaaaacattgaattggggtgggcttacagttcagatgtttag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acaacaactcttataaaggaaaacattgaattggggtgggcttacagttcagatgtttag 323
Query: 124 tccattatcgtcatggcagaaggcatggcagcctggaggtagacatagtgctggagagag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tccattatcgtcatggcagaaggcatggcagcctggaggtagacatagtgctggagagag 383
Query: 184 ctgagagctctgcatcccaattagcagacagcaggaagagacagttaggcactaggcctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgagagctctgcatcccaattagcagacagcaggaagagacagttaggcactaggcctg 443
Query: 244 gcttaagcttctgaaacctcacagcgctgccttctacaaggccacacttcctaagagggc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcttaagcttctgaaacctcacagcgctgccttctacaaggccacacttcctaagagggc 503
Query: 304 tcctccttatgggactgtgtgggagccatttttattcaaaccatcacaaggaagagtata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcctccttatgggactgtgtgggagccatttttattcaaaccatcacaaggaagagtata 563
Query: 364 gtaactcccgttccttaagtgagaaatgaatacagaataaaaagagggaaaagactcatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtaactcccgttccttaagtgagaaatgaatacagaataaaaagagggaaaagactcatt 623
Query: 424 ttacaatggataaaagctactctaaaggttgtcaaggtgatgaattgtgtttatagtaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttacaatggataaaagctactctaaaggttgtcaaggtgatgaattgtgtttatagtaag 683
Query: 484 gactctccagtagggaattgctcctctggtcctcccccaacaaacccataaccaccgtct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gactctccagtagggaattgctcctctggtcctcccccaacaaacccataaccaccgtct 743
Query: 544 agttatgggagaaatatcggataaatcc 571
||||||||||||||||||||||||||||
Sbjct: 744 agttatgggagaaatatcggataaatcc 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_e23.g1 MSMg01no095_e23.g1 CHROMAT_FILE:
MSMg01no095_e23.g1 PHD_FILE: MSMg01no095_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:17 2005
(286 letters)
>mm_chr17_25275359_25276044
Length = 686
Score = 534 bits (276), Expect = e-156
Identities = 282/286 (98%), Gaps = 4/286 (1%)
Strand = Plus / Minus
Query: 1 caggacagccagggttacacagagaaatcctgtctcatgaacaacaacaaaaaacaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 caggacagccagggttacacagagaaatcctgtctcatgaacaacaacaaaaaacaaaac 351
Query: 61 acacacacatcctccctcagatagatggcaaaaacctataatgatagattcttagaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 acacacacatcctccctcagatagatggcaaaaacctataatgatagattcttagaggtt 291
Query: 121 gagggaagagatcaaaaatgaaaagcctatgaaataacatgacataaataaataaataaa 180
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 290 gagggaagagatcaaaaatgaaaagcctatgaaataacatgac----ataaataaataaa 235
Query: 181 taaataaataaataaataaataaataaataaatcttttttaaaaggggaggaggggtggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 taaataaataaataaataaataaataaataaatcttttttaaaaggggaggaggggtggc 175
Query: 241 tggagagatggctcagcggttaagaatactaactactcttccagag 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tggagagatggctcagcggttaagaatactaactactcttccagag 129
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
