Query= MSMg01no097_p09.b1 MSMg01no097_p09.b1 CHROMAT_FILE:
MSMg01no097_p09.b1 PHD_FILE: MSMg01no097_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:53 2005
(385 letters)
>mm_chr17_82710571_82711355
Length = 785
Score = 584 bits (302), Expect = e-171
Identities = 314/318 (98%)
Strand = Plus / Minus
Query: 68 cttaaaggcacttataataaaacaatactgaaagagagcacgtggatccatacaccagac 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 cttaaaggcacttataataaaacaatactgaaagagagcacgtggatccatacaccagac 726
Query: 128 taacacggggatagagtttgagtatacgggctatgggaattccaaggtttcagggggcat 187
||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 725 taacatgggaatagagtttgagtatacgggctatgggaatgccaaggtttcagggggcat 666
Query: 188 agtttccttgaaactctgcctcgtgagtgcttctaagcctctcggcctgtcaagcagact 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 agtttccttgaaactctgcctcgtgagtgcttctaagcctctcggcctgtcaagcagact 606
Query: 248 tcactggagtgggcatagcatcttgtcactaatgtcacaccaataattaaaatatttata 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tcactggagtgggcatagcatcttgtcactaatgtcacaccaataattaaaatatttata 546
Query: 308 tgtaaagattctgtcttgtcatttatatcacatagatacttgacattgctcattagaaat 367
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 545 tgtaaagattctgtcttgtcatttatatcacatagatacttgacattgttcattagaaat 486
Query: 368 gctttcttgtttggaaga 385
||||||||||||||||||
Sbjct: 485 gctttcttgtttggaaga 468
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no097_p09.g1 MSMg01no097_p09.g1 CHROMAT_FILE:
MSMg01no097_p09.g1 PHD_FILE: MSMg01no097_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:54 2005
(292 letters)
>mm_chr17_82532206_82532895
Length = 690
Score = 536 bits (277), Expect = e-157
Identities = 287/291 (98%), Gaps = 2/291 (0%)
Strand = Plus / Plus
Query: 1 gaacagattcactcataaacatacgcttcctttggcatcccatcgtgaaaatcatgagag 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 gaacagattcactcataaacatacgcttcccttggcatcccatcgtgaaaatcatgagag 260
Query: 61 gctgccatgttagtcatgtcaccacagtgtttgaaggacagcctggcatcccatgctcac 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgccatgttagtcatgtcaccactgtgtttgaaggacagcctggcatcccatgctcac 320
Query: 121 ttgctgcccaggcaaaagccaaaacatactgttaaattgacactgttaaaatcatttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgctgcccaggcaaaagccaaaacatactgttaaattgacactgttaaaatcatttttc 380
Query: 181 tgaggcagcctgcagtgccatttcccactagaattggctagttcatgcttccaaaagtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaggcagcctgcagtgccatttcccactagaattggctagttcatgcttccaaaagtgt 440
Query: 241 tttttttcctgaaagatttatttatgtacatttgggtttttttgttattga 291
||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttt--cctgaaagatttatttatgtacatttgggtttttttgttattga 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 690
Length adjustment: 9
Effective length of query: 283
Effective length of database: 681
Effective search space: 192723
Effective search space used: 192723
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
