Query= MSMg01no098_j02.b1 MSMg01no098_j02.b1 CHROMAT_FILE:
MSMg01no098_j02.b1 PHD_FILE: MSMg01no098_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:43 2005
(499 letters)
>mm_chr17_8363962_8364860
Length = 899
Score = 957 bits (495), Expect = 0.0
Identities = 498/499 (99%)
Strand = Plus / Minus
Query: 1 aaaaactaacaaaaagagataatcccccaatttcatagtgctgcaatttggagaacaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aaaaactaacaaaaagagataatcccccaatttcatagtgctgcaatttggagaacaaag 640
Query: 61 catttccttttgaagatacaaatatctgtctggtccgctggaagaattttagtttataat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 catttccttttgaagatacaaatatctgtctggtccgctggaagaattttagtttataat 580
Query: 121 gacatggtgaactgagttcaacattaaacagttgcttcacacctttctctataaccttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gacatggtgaactgagttcaacattaaacagttgcttcacacctttctctataaccttag 520
Query: 181 gtgatcatttaaacattaaactctttatacaagtctatcttcttgattagatgagctctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gtgatcatttaaacattaaactctttatacaagtctatcttcttgattagatgagctctt 460
Query: 241 tcaagacgcaggactttcttaaatcctactcttttattacccagagaatctatttactat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tcaagacgcaggactttcttaaatcctactcttttattacccagagaatctatttactat 400
Query: 301 gtcttaaatgaaactggtattcagacaagcttttgtgattttcaggttctgactggtctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gtcttaaatgaaactggtattcagacaagcttttgtgattttcaggttctgactggtctc 340
Query: 361 taaatagaatccacaagtagtttacgaccctcctgcctctcagctaaatgtttctgactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 taaatagaatccacaagtagtttacgaccctcctgcctctcagctaaatgtttctgactg 280
Query: 421 aaagaacatccagacagacagtggagcagcctctaaggagctgactatgcaaacagtgta 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aaagcacatccagacagacagtggagcagcctctaaggagctgactatgcaaacagtgta 220
Query: 481 tgtaggtaaagctaacgtg 499
|||||||||||||||||||
Sbjct: 219 tgtaggtaaagctaacgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_j02.g1 MSMg01no098_j02.g1 CHROMAT_FILE:
MSMg01no098_j02.g1 PHD_FILE: MSMg01no098_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:43 2005
(377 letters)
>mm_chr17_8190823_8191599
Length = 777
Score = 702 bits (363), Expect = 0.0
Identities = 372/375 (99%)
Strand = Plus / Plus
Query: 1 tttgtaagcattcaggagactgcagtgggatacccctgtggtgggctccattgcccaatg 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tttgtaagcattcaggagactgcagtgggatacccctgtggtgggatccattgcccaatg 260
Query: 61 gacagaaaggacttcagccatcatacagtggccatgaggacagtcttctcaccttgggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacagaaaggacttcagccatcatacagtggccatgaggacagtcttctcaccttgggat 320
Query: 121 caatgaagccttgtttggggcttttactatcaatcagtaacaagccttaattaaattcct 180
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatgaagccttgtttgtgtcttttactatcaatcagtaacaagccttaattaaattcct 380
Query: 181 gctttgcagcatggaggtggtaccctccatccctttggtggggtgttggagccggcctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctttgcagcatggaggtggtaccctccatccctttggtggggtgttggagccggcctcc 440
Query: 241 taaaatagatgtcgattgaggattcagtctcaacacaataccccaaactcacaggttatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaatagatgtcgattgaggattcagtctcaacacaataccccaaactcacaggttatg 500
Query: 301 aggaaagttggtcatctcatcaagaagcaggaagacctcagaatgaaaactggaagagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggaaagttggtcatctcatcaagaagcaggaagacctcagaatgaaaactggaagagcc 560
Query: 361 cactgttacaaatca 375
|||||||||||||||
Sbjct: 561 cactgttacaaatca 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
