TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAGGGCTATGCAAGCAGGAGTGGGTGGGTTGGTGGGCAGGGGGAGG
GGGAGAGAATATGTCACTTTCCCTTTTTCCTCTCTTTTTTCCTCCCTCCT
TTTCCTTTTCCCCCCTTCCCCCCCTTATTTCCCCTCTTTTCCCTTCCTTT
TCTCCCCTTCTTTCCCCCCTCCTTTTCTCTCCCCCTCCTCTTTACCCTCT
TTTTATTTTTTTCTCTTTTCTCCCCCAGCATACCCCCCCCCCTTTCTCCC
TTATTCCCATTCCACTCTTCTCTTTTTTTTTTTTTTTCCCCCCTCCTTCT
CTTTCCCCCTTCCTTTTCTTTTTTTTTTCTTTTCCCTCCCCCCCTTCTTC
TTTTTTCCCCCGCCCTTTTTTTTTTTTCTCTTCCCCCCCCCCCCATCCCC
CCTTCCCTTTTCTCCCCCCCTTTTTCTCCTCCCTCTTTCTCTTTTTTCCC
TCTTTTTTCCCCTTTCTTTTCCTCCCTTCACCCCCTTCCCCTTTTTTCTT
TTCTTCCCCCCCTCCCTCTTTTCTTTTTCCCCTCTCCCCCTTCTTACCTT
CTCTTCTCACTTTCCCCCTCCGCTCACTCTTTTTCTCTCTCCTCCCTCCC
CTCTCTTTCTCCTCTTCCCTCCCCTCTCCCTCTTCTTTCTCTTCTTTCCA
CTCCTTCTTTTCCCCTTCTTTTCCTCCCCTCTCCTTCTCATCTTCCCTCC
CCCTCCTCCTCTTCTTTCCCCCCCCTCTTCTCTCCACTCCGCCCCCTCTG
CCTTTTTCCTTCTCT

CCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACCATCTGAAGCTTCTTTGTAAGCAT
TCTGCTTTCTCCTTATATATTACATTATGTAATCTCACTGAGCTGACATG
TTCTTTGAAAGGCTAGGAGAGTTTGAGGATGTGTGTTTTGAGAAGAAAGG
TGAAATCATTAGCTTTACTTTCTAAATATTTTAATAAGGCTACCGAAGCC
TGGAATGCCATTTTTATTCAGCTATCTTTTGTTTTTCTGCCACAACTTAG
CACTTATAGTGAATGGCAATACATATTAATAAGCAGGTTGCTTAATAAGA
CTCAGGTTAATGATTATAATTATTCCTACATGGTGTATGCTGACAGTGTG
TGCAAAAATATTCACTCCCAAAAAAAGCCACCCCCCCAAAAAAAAGCCCA
AGGCTTTTACAGATAATTTTGATACCCAGTTGCTATCTAAGAAGGTTAAT
AGTGTTGTTATCCTTGGAGTCTCTCTCTCTGTCTCTCTCTGTCTCTGTCT
CTGTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTCTCT
CTCTCTCTCTCTCTCTCTGTCTCCTTCCAAAAAGTGAATATTTTAATTAC
CCGGCAATCATGTCTGCGGTCGAAATTCCGCGAGCGCACATGGCGCCCAC
TCTTCA

Query= MSMg01no099_p21.g1 MSMg01no099_p21.g1 CHROMAT_FILE:
MSMg01no099_p21.g1 PHD_FILE: MSMg01no099_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:43 2005
         (570 letters)



>mm_chr17_62728639_62729610
          Length = 972

 Score =  928 bits (480), Expect = 0.0
 Identities = 537/572 (93%), Gaps = 28/572 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   accatctgaagcttctttgtaagcattctgctttctccttatatattacattatgtaatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 646 accatctgaagcttctttgtaagcattctgctttctccttatatattacgttatgtaatc 587

                                                                       
Query: 61  tcactgagctgacatgttctttgaaaggctaggagagtttgaggatgtgtgttttgagaa 120
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 586 tcactgagctgacatgttctttgaaaggctaggagggtttgaggatgtgtgttttgagaa 527

                                                                       
Query: 121 gaaaggtgaaatcattagctttactttctaaatattttaataaggctaccgaagcctgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gaaaggtgaaatcattagctttactttctaaatattttaataaggctaccgaagcctgga 467

                                                                       
Query: 181 atgccatttttattcagctatcttttgtttttctgccacaacttagcacttatagtgaat 240
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 466 atgccatttttattcagctatctcttgtttttctgccacaacttagcacttatagtgaat 407

                                                                       
Query: 241 ggcaatacatattaataagcaggttgcttaataagactcaggttaatgattataattatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ggcaatacatattaataagcaggttgcttaataagactcaggttaatgattataattatt 347

                                                                       
Query: 301 cctacatggtgtatgctgacagtgtgtgcaaaaatattcactcccaaaaaaagccacccc 360
           ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 346 cctacatggtgtatgatgacagtgtgtgcaaaaatattcactcccaaaaaaagctacccc 287

                                                                       
Query: 361 cc--caaaaaaaagcccaaggcttttacagataattttgatacccagttgctatctaaga 418
           ||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 286 cctccaaaaaaaagcccaaggcttttacagataattttgatacccagttgttatctaaga 227

                                                                       
Query: 419 aggttaatagtgttgttatccttggagtctctctctctgtctctctctgtctctgtctct 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 226 aggttaatagtgttgttatccttggagtctctctctctgtctctctctgtctctgtct-- 169

                                                                       
Query: 479 gtgtctctgtctctgtctctgtctctgtctctgtctctgtctctctctctctctctctct 538
             ||||||||                ||||||||||||||||||||||||||||||||||
Sbjct: 168 --gtctctgt----------------gtctctgtctctgtctctctctctctctctctct 127

                                           
Query: 539 ctctctgtctccttccaaaaagtgaatatttt 570
                 ||||||||| ||||||||||||||||
Sbjct: 126 ------gtctccttcaaaaaagtgaatatttt 101


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 972
Length adjustment: 10
Effective length of query: 560
Effective length of database: 962
Effective search space:   538720
Effective search space used:   538720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)