Query= MSMg01no104_c08.b1 MSMg01no104_c08.b1 CHROMAT_FILE:
MSMg01no104_c08.b1 PHD_FILE: MSMg01no104_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:18 2005
(324 letters)
>mm_chr17_71245721_71246443
Length = 723
Score = 553 bits (286), Expect = e-162
Identities = 313/324 (96%), Gaps = 5/324 (1%)
Strand = Plus / Plus
Query: 1 cagcctccttctgagtctgcagcaaataacgtggacacagtgctaaaaatgatgttttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagcctccttctgagtctgcagcaaataacgtggacacagtgctaaaaatgatgttttgt 260
Query: 61 ggagttttaaaaatccaggatggattcaacagcaaagcgcaaatacttaattataactat 120
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagttttaaacatccaggacggattcaacagcaaagcgcaaatacttaattataactat 320
Query: 121 gggatattgcataaatgcctaaaatgttgttagtgcaaatgaagactgtaacaagtgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggatattgcataaatgcctaaaatgttgttagtgcaaatgaagactgtaacaagtgttg 380
Query: 181 aaaagaattgagagttagaaatataattcaaaagtgttcattgtagccaccagaaaaaaa 240
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaggattgagagttagaagcataattcaaaagtgttcattgtagccaccagaaaaaaa 440
Query: 241 --caaagcttatagaaacctcaaaaatttagatcttctttatacttaagatttttggggg 298
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 441 aacaaagcttatagaaacctcaaaaatttagatcttc---atacttaagttttttggggg 497
Query: 299 gtgggggtgggggctaggtagaat 322
||||||||||||||||||||||||
Sbjct: 498 gtgggggtgggggctaggtagaat 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 723
Length adjustment: 9
Effective length of query: 315
Effective length of database: 714
Effective search space: 224910
Effective search space used: 224910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no104_c08.g1 MSMg01no104_c08.g1 CHROMAT_FILE:
MSMg01no104_c08.g1 PHD_FILE: MSMg01no104_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:03:18 2005
(235 letters)
>mm_chr17_71325963_71326597
Length = 635
Score = 385 bits (199), Expect = e-111
Identities = 224/233 (96%), Gaps = 2/233 (0%)
Strand = Plus / Minus
Query: 1 ttcctgtgataatccatgtgtggatcgtttgttctgtgatttaatccttgttctgaggta 60
|||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 389 ttcctgtgataatccatgtgtggatcatttgttttgtgatttaacccttgttctgaggta 330
Query: 61 cctatgaaaagctttcaggtggcggtggggccccgataaggagcagggatcagctgcagg 120
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 329 cctatgaaaagctttcaggtggcggtggggccccaataaggagcaggggtcagctgcagg 270
Query: 121 atgagtacttggcgggtactgttcctgttagctaagcagattgtgtctgcaggagcctga 180
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 269 gtgagtacttggcgggtactgttcctgttagctaagtagattgtgtctgcaggagcctga 210
Query: 181 aagccat--tcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 231
||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 aagccattctcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
